BLASTX nr result

ID: Panax21_contig00010924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010924
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28107.3| unnamed protein product [Vitis vinifera]               75   9e-19
gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia...    84   3e-14
ref|XP_002282434.1| PREDICTED: hydroxymethylglutaryl-CoA synthas...    82   9e-14
dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasil...    82   1e-13
dbj|BAF98278.1| hydroxymethylglutaryl-CoA synthase [Hevea brasil...    82   1e-13

>emb|CBI28107.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score = 74.7 bits (182), Expect(2) = 9e-19
 Identities = 48/95 (50%), Positives = 55/95 (57%), Gaps = 36/95 (37%)
 Frame = -3

Query: 561 GDVKQISTKKQLSDMIEV------LLC-------PFL*---------------------- 487
           GDVKQIS +KQLS +IEV      L+C       P++                       
Sbjct: 101 GDVKQISARKQLSYVIEVFTAEYSLICKISEYKKPYISLMDGITMGFGIGLSGHGRYRIV 160

Query: 486 -QRTVLAMPENGIGLFPDVGFAYIAAQSPGAGSVG 385
            +RT+LAMPENGIGLFPDVGFAYIAAQSPG GSVG
Sbjct: 161 TERTLLAMPENGIGLFPDVGFAYIAAQSPGEGSVG 195



 Score = 45.1 bits (105), Expect(2) = 9e-19
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 629 GMDIKGVVAEIQKDKSTPLVQK 564
           GMDIKGVVAEIQKDK+TPLVQK
Sbjct: 70  GMDIKGVVAEIQKDKTTPLVQK 91


>gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia sinensis]
          Length = 467

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = -2

Query: 760 LTAVTSLLDKYGIDRKQIGRLEVGSETVIDKSKSIKTFLMQIFEE 626
           LTAVTSLL+KYGID KQIGRLEVGSETVIDKSKSIKTFLMQIFEE
Sbjct: 61  LTAVTSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEE 105


>ref|XP_002282434.1| PREDICTED: hydroxymethylglutaryl-CoA synthase [Vitis vinifera]
           gi|297742614|emb|CBI34763.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = -2

Query: 760 LTAVTSLLDKYGIDRKQIGRLEVGSETVIDKSKSIKTFLMQIFEE 626
           LT VTSLL+KYGID KQIGRLEVGSETVIDKSKSIKTFLMQIFEE
Sbjct: 58  LTVVTSLLEKYGIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEE 102


>dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]
          Length = 464

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -2

Query: 760 LTAVTSLLDKYGIDRKQIGRLEVGSETVIDKSKSIKTFLMQIFEEW 623
           LTAVTSLLDKY ID KQIGRLEVGSETVIDKSKSIKTFLMQIFE++
Sbjct: 58  LTAVTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKF 103


>dbj|BAF98278.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]
          Length = 465

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = -2

Query: 760 LTAVTSLLDKYGIDRKQIGRLEVGSETVIDKSKSIKTFLMQIFEEW 623
           LTAVTSLLDKY ID KQIGRLEVGSETVIDKSKSIKTFLMQIFE++
Sbjct: 58  LTAVTSLLDKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKF 103


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