BLASTX nr result

ID: Panax21_contig00010910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010910
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    69   2e-09
emb|CBI22123.3| unnamed protein product [Vitis vinifera]               67   6e-09
ref|XP_002531141.1| lupus la ribonucleoprotein, putative [Ricinu...    59   1e-06

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
 Frame = -2

Query: 904 WMKWIMPPG-PFSPVSSPQSVARYSHYMLAGQFQGITLDEKTTH---------GHTEMF- 758
           WMKWIMPP   FSP+SSPQS+   S+  LA +FQ +TL E+TT+          H E F 
Sbjct: 51  WMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTNYSTVRSEADVHVEAFS 110

Query: 757 NRSSYGEFNSQLQQSGGEGTVQASFEPKTLAGSLSK 650
           +RSS G+ NSQ +    EG  Q     + L   + +
Sbjct: 111 SRSSSGDLNSQSKPYSSEGPSQVGVSKEVLIAQIQQ 146


>emb|CBI22123.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
 Frame = -2

Query: 904 WMKWIMPPG-PFSPVSSPQSVARYSHYMLAGQFQGITLDEKTTH---------GHTEMF- 758
           WMKWIMPP   FSP+SSPQS+   S+  LA +FQ +TL E+TT+          H E F 
Sbjct: 470 WMKWIMPPSVQFSPLSSPQSIGSSSYDTLAARFQNVTLGEQTTNYSTVRSEADVHVEAFS 529

Query: 757 NRSSYGEFNSQLQQSGGEGTVQASFE 680
           +RSS G+ NSQ +    EG  Q   +
Sbjct: 530 SRSSSGDLNSQSKPYSSEGPSQVGVQ 555


>ref|XP_002531141.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223529254|gb|EEF31226.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 471

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
 Frame = -2

Query: 904 WMKWIMPPGP-FSPVSSPQSVARYSHYMLAGQFQGITLDEK-TTHG--------HTEMF- 758
           WM+W+MPP   F+ VS P  + R S  MLA   Q I+L+E  T+H         H E F 
Sbjct: 333 WMRWVMPPSAQFTSVSGPPFLGRSSQDMLAAHVQSISLEESVTSHSSARSQVDVHNEAFL 392

Query: 757 NRSSYGEFNSQLQQSGGEGTVQASFEPKTLAGSLSK*SNGC 635
            RSS G+FNSQ Q    EGT Q S +  + + +  +  N C
Sbjct: 393 GRSSSGDFNSQSQLLSLEGTDQVSVQGGSDSSTSMRNPNYC 433


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