BLASTX nr result

ID: Panax21_contig00010885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010885
         (2004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]   514   e-177
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig...   512   e-176
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   519   e-175
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   500   e-173
ref|XP_002515036.1| RCC1 and BTB domain-containing protein, puta...   511   e-171

>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  514 bits (1323), Expect(2) = e-177
 Identities = 264/348 (75%), Positives = 280/348 (80%)
 Frame = -2

Query: 1046 ATSSFFRQPAEFAPDHELSLAELAALDMCHNRAIFKPMTGDERLELKRKCGGSWKLVLRF 867
            AT SFFRQPA FAPD ELS++ELAALDMC  RAIF+PM  +ER  LK++CGGSWKLVLRF
Sbjct: 78   ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRF 137

Query: 866  FLAGEACSRREKSQAIAGPGHSIAVTSKGVVYSFGSNNSGQLGHGTIEEDWRPRQISSLX 687
             LAGEAC RREKSQAIAGPGHSIAVT KG VYSFGSN+SGQLGHGT +E+WRPRQI SL 
Sbjct: 138  LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 197

Query: 686  XXXXXXXXXXXXRTMLISDAGQVFAIGKDSFGEAEYGVQGSKLVSTPQLVESLKNIFVVQ 507
                        RTMLISDAGQV+A GKDSFGEAEYGVQG+KLV+TPQLVESLKNIFVVQ
Sbjct: 198  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQ 257

Query: 506  AAIGNFFTAVLSREGRVYTFSWGNESKLGHQTEPNDLEPHPLLGALENIPVVQIXXXXXX 327
            AAIGNFFTAVLSREGRVYTFSWGN++KLGHQTE NDLEPHPLLGALENIPVVQI      
Sbjct: 258  AAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCY 317

Query: 326  XXXXXCQPSGMSVYSVXXXXXXXXXXGTRTDEKSPRLIEQFQTLNLQPXXXXXXXXXXXX 147
                 CQP+GMSVYSV          GTRTDEK PRLIEQFQ LNLQP            
Sbjct: 318  LLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAV 377

Query: 146  VGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSEVKAVHVATGDY 3
            VG DGRVCTWGWGRYGCLGHGNE+CESVPKVVEAL  VKAVHVATGDY
Sbjct: 378  VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDY 425



 Score =  135 bits (339), Expect(2) = e-177
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -1

Query: 1344 MDATTSGTETIQYHSIPDQPITALVTSSPPPFQRQQRHCFGDATPGEFPLSANPSIVLHV 1165
            MDAT SGT T+QYH+IPDQPI A+VTS  P FQRQQRHCFGD++PGEFPL+ANPSIVLHV
Sbjct: 1    MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 1164 LTGCNLDPQDLAKLEA 1117
            LT CNL+PQDLAKLEA
Sbjct: 61   LTACNLEPQDLAKLEA 76



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
 Frame = -2

Query: 776 VYSFGSNNSGQLGHGTIEEDWRPRQISSLXXXXXXXXXXXXXRTMLISDAGQVFAIGKD- 600
           VYS G    G+LGHGT  ++  PR I                  ++ + A     +G+D 
Sbjct: 330 VYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPM-------VVAAGAWHAAVVGRDG 382

Query: 599 ---SFGEAEYGVQG---SKLVSTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 438
              ++G   YG  G    +  S P++VE+L N+  V  A G++ T V+S +G VY+F  G
Sbjct: 383 RVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCG 442

Query: 437 NESKLGHQTEPN 402
             S LGH   P+
Sbjct: 443 ESSSLGHNNGPD 454


>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
            [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
            protein product [Vitis vinifera]
          Length = 534

 Score =  512 bits (1319), Expect(2) = e-176
 Identities = 263/348 (75%), Positives = 280/348 (80%)
 Frame = -2

Query: 1046 ATSSFFRQPAEFAPDHELSLAELAALDMCHNRAIFKPMTGDERLELKRKCGGSWKLVLRF 867
            AT SFFRQPA FAPD ELS++ELAALDMC  RAIF+PM  +ER  LK++CGGSWKLVLRF
Sbjct: 76   ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRF 135

Query: 866  FLAGEACSRREKSQAIAGPGHSIAVTSKGVVYSFGSNNSGQLGHGTIEEDWRPRQISSLX 687
             LAGEAC RREKSQAIAGPGHSIAVT KG VYSFGSN+SGQLGHGT +E+WRPRQI SL 
Sbjct: 136  LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLE 195

Query: 686  XXXXXXXXXXXXRTMLISDAGQVFAIGKDSFGEAEYGVQGSKLVSTPQLVESLKNIFVVQ 507
                        RTMLISDAGQV+A GKDSFGEAEYGVQG+KLV+TPQLVESLKNIFVVQ
Sbjct: 196  GIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQ 255

Query: 506  AAIGNFFTAVLSREGRVYTFSWGNESKLGHQTEPNDLEPHPLLGALENIPVVQIXXXXXX 327
            AAIGNFFTAVLSREGRVYTFSWGN++KLGHQTE NDLEPHPLLGALENIPVVQI      
Sbjct: 256  AAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCY 315

Query: 326  XXXXXCQPSGMSVYSVXXXXXXXXXXGTRTDEKSPRLIEQFQTLNLQPXXXXXXXXXXXX 147
                 CQP+GMSVYSV          GTRTDEK PRLIEQF+ LNLQP            
Sbjct: 316  LLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAV 375

Query: 146  VGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSEVKAVHVATGDY 3
            VG DGRVCTWGWGRYGCLGHGNE+CESVPKVVEAL  VKAVHVATGDY
Sbjct: 376  VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDY 423



 Score =  135 bits (339), Expect(2) = e-176
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = -1

Query: 1344 MDATTSGTETIQYHSIPDQPITALVTSSPPPFQRQQRHCFGDATPGEFPLSANPSIVLHV 1165
            MDAT SGT T+QYH+IPDQPI A+VTS  P FQRQQRHCFGD++PGEFPL+ANPSIVLHV
Sbjct: 1    MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 1164 LTGCNLDPQDLAKLEA 1117
            LT CNL+PQDLAKLEA
Sbjct: 61   LTACNLEPQDLAKLEA 76



 Score = 64.7 bits (156), Expect = 9e-08
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
 Frame = -2

Query: 776 VYSFGSNNSGQLGHGTIEEDWRPRQISSLXXXXXXXXXXXXXRTMLISDAGQVFAIGKD- 600
           VYS G    G+LGHGT  ++  PR I                  ++ + A     +G+D 
Sbjct: 328 VYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPM-------VVAAGAWHAAVVGRDG 380

Query: 599 ---SFGEAEYGVQG---SKLVSTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 438
              ++G   YG  G    +  S P++VE+L N+  V  A G++ T V+S +G VY+F  G
Sbjct: 381 RVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCG 440

Query: 437 NESKLGHQTEPN 402
             S LGH   P+
Sbjct: 441 ESSSLGHNNGPD 452


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
            predicted protein [Populus trichocarpa]
          Length = 538

 Score =  519 bits (1337), Expect(2) = e-175
 Identities = 263/348 (75%), Positives = 283/348 (81%)
 Frame = -2

Query: 1046 ATSSFFRQPAEFAPDHELSLAELAALDMCHNRAIFKPMTGDERLELKRKCGGSWKLVLRF 867
            AT SFFRQPA FAPD+ELS++ELAALDMC  RAIFKPMT +ER +LK++CGGSWKLVLRF
Sbjct: 80   ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139

Query: 866  FLAGEACSRREKSQAIAGPGHSIAVTSKGVVYSFGSNNSGQLGHGTIEEDWRPRQISSLX 687
             LAGEAC RRE+SQAIAGPGHSIAVTS GV YSFGSN+SGQLGHGT EE+WRPRQI SL 
Sbjct: 140  LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQIRSLQ 199

Query: 686  XXXXXXXXXXXXRTMLISDAGQVFAIGKDSFGEAEYGVQGSKLVSTPQLVESLKNIFVVQ 507
                        RTMLISDAG+V+A GKDSFGEAEYGVQG+K V+TPQLVESLKNIFVVQ
Sbjct: 200  GIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTVTTPQLVESLKNIFVVQ 259

Query: 506  AAIGNFFTAVLSREGRVYTFSWGNESKLGHQTEPNDLEPHPLLGALENIPVVQIXXXXXX 327
            AAIGNFFTAVLSREGRVYTFSWGN+ KLGHQTEPND+ PHPLLGALENIPVVQI      
Sbjct: 260  AAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCY 319

Query: 326  XXXXXCQPSGMSVYSVXXXXXXXXXXGTRTDEKSPRLIEQFQTLNLQPXXXXXXXXXXXX 147
                 CQPSGMSVYSV          G+RTDEK PRLIEQFQ LNLQP            
Sbjct: 320  LLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAV 379

Query: 146  VGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSEVKAVHVATGDY 3
            VG DGRVCTWGWGRYGCLGHGNE+CESVPKVV+ALS+VKAVHVATGDY
Sbjct: 380  VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVATGDY 427



 Score =  125 bits (313), Expect(2) = e-175
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = -1

Query: 1344 MDATTSGTETIQYHSIPDQPITALVTSSPPPFQRQQRHCFGDATPGEFPLSANPSIVLHV 1165
            MD+TTSGT TIQYH+I DQP+TA+V      +QR QRHCFGD+ PGEFPL+ANPSIVLHV
Sbjct: 1    MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60

Query: 1164 LTGCNLDPQDLAKLEA 1117
            LT CNLDPQDLAKLEA
Sbjct: 61   LTTCNLDPQDLAKLEA 76


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 535

 Score =  500 bits (1287), Expect(2) = e-173
 Identities = 253/348 (72%), Positives = 277/348 (79%)
 Frame = -2

Query: 1046 ATSSFFRQPAEFAPDHELSLAELAALDMCHNRAIFKPMTGDERLELKRKCGGSWKLVLRF 867
            AT SFFRQPA FAPD +LSL+ELAALDMC  RAIFKPMT ++R +LK +CGGSWKL LR+
Sbjct: 76   ATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLALRY 135

Query: 866  FLAGEACSRREKSQAIAGPGHSIAVTSKGVVYSFGSNNSGQLGHGTIEEDWRPRQISSLX 687
             +AGEAC RREKSQAIAGPGHSIAVTSKGVVYSFGSN+SGQLGHGT +E+WRPR I +L 
Sbjct: 136  LMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPIRTLQ 195

Query: 686  XXXXXXXXXXXXRTMLISDAGQVFAIGKDSFGEAEYGVQGSKLVSTPQLVESLKNIFVVQ 507
                        RTML+SD+GQV+A GKDSFGEAEYGVQGSK V+ PQ+VESLKNIFVVQ
Sbjct: 196  GIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQ 255

Query: 506  AAIGNFFTAVLSREGRVYTFSWGNESKLGHQTEPNDLEPHPLLGALENIPVVQIXXXXXX 327
            AAIGNFFTAVLSREGRVYTFSWG++ KLGH T+ +D+EPHPLLGALENIPVVQI      
Sbjct: 256  AAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPLLGALENIPVVQIAAGYCY 315

Query: 326  XXXXXCQPSGMSVYSVXXXXXXXXXXGTRTDEKSPRLIEQFQTLNLQPXXXXXXXXXXXX 147
                 CQPSGMSVYSV          G+RTDEK PRLIEQF  LNLQP            
Sbjct: 316  LLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAV 375

Query: 146  VGSDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSEVKAVHVATGDY 3
            VG DGRVCTWGWGRYGCLGHGNE+CESVPKVVEALS VKAVHVATGDY
Sbjct: 376  VGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDY 423



 Score =  138 bits (348), Expect(2) = e-173
 Identities = 63/76 (82%), Positives = 70/76 (92%)
 Frame = -1

Query: 1344 MDATTSGTETIQYHSIPDQPITALVTSSPPPFQRQQRHCFGDATPGEFPLSANPSIVLHV 1165
            MDATTSGT T+QYH+IPDQPITA++ +  P FQRQQRHCFGD+TPGEFPLSANPSIVLHV
Sbjct: 1    MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60

Query: 1164 LTGCNLDPQDLAKLEA 1117
            LT CNL+PQDLAKLEA
Sbjct: 61   LTACNLEPQDLAKLEA 76



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
 Frame = -2

Query: 776 VYSFGSNNSGQLGHGTIEEDWRPRQISSLXXXXXXXXXXXXXRTMLISDAGQVFAIGKD- 600
           VYS G    G+LGHG+  ++  PR I                  ++ + A     +G+D 
Sbjct: 328 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFGLLNLQPM-------VVAAGAWHAAVVGRDG 380

Query: 599 ---SFGEAEYGVQG---SKLVSTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 438
              ++G   YG  G    +  S P++VE+L N+  V  A G++ T V+S +G VY+F  G
Sbjct: 381 RVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCG 440

Query: 437 NESKLGHQTEPND 399
             + LGH    ND
Sbjct: 441 ESASLGHNAAGND 453


>ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
            gi|223546087|gb|EEF47590.1| RCC1 and BTB
            domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  511 bits (1317), Expect(2) = e-171
 Identities = 259/346 (74%), Positives = 279/346 (80%)
 Frame = -2

Query: 1040 SSFFRQPAEFAPDHELSLAELAALDMCHNRAIFKPMTGDERLELKRKCGGSWKLVLRFFL 861
            S+   QPA FAPD+ELS++ELAALDMC  RAIFKPMT +ER +LK++CGGSWKLVLRF L
Sbjct: 78   SALLLQPANFAPDYELSISELAALDMCQKRAIFKPMTSEERRDLKQRCGGSWKLVLRFLL 137

Query: 860  AGEACSRREKSQAIAGPGHSIAVTSKGVVYSFGSNNSGQLGHGTIEEDWRPRQISSLXXX 681
            AGEAC RRE SQAIAGPGHSIAVTSKGVVYSFGSN+SGQLGHG  EE+WRPRQI SL   
Sbjct: 138  AGEACCRRENSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGNTEEEWRPRQIRSLQGI 197

Query: 680  XXXXXXXXXXRTMLISDAGQVFAIGKDSFGEAEYGVQGSKLVSTPQLVESLKNIFVVQAA 501
                      RTMLISDAGQV+A GKDSFGEAEYGVQG+KLV+TPQLVESLKNIFVVQAA
Sbjct: 198  RIIQAAAGPGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNIFVVQAA 257

Query: 500  IGNFFTAVLSREGRVYTFSWGNESKLGHQTEPNDLEPHPLLGALENIPVVQIXXXXXXXX 321
            IGNFFTAVLSREGRVYTFSWG++ KLGHQTEP D+EPHPLLGALENIPVVQI        
Sbjct: 258  IGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLL 317

Query: 320  XXXCQPSGMSVYSVXXXXXXXXXXGTRTDEKSPRLIEQFQTLNLQPXXXXXXXXXXXXVG 141
               CQPSGMSVYSV          G+RTDEK PRLIEQFQ LNLQP            VG
Sbjct: 318  ALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVG 377

Query: 140  SDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSEVKAVHVATGDY 3
             DGRVCTWGWGRYGCLGHGNE+CESVPKVV+ALS +KAVHVATGDY
Sbjct: 378  RDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDY 423



 Score =  120 bits (301), Expect(2) = e-171
 Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 1/77 (1%)
 Frame = -1

Query: 1344 MDATTSGTETIQYHSIP-DQPITALVTSSPPPFQRQQRHCFGDATPGEFPLSANPSIVLH 1168
            MDATTSGT +IQYH+I  DQPITA+V +    FQR QRHCFG+++PGEFPL+A+PSIVLH
Sbjct: 1    MDATTSGTSSIQYHNITTDQPITAIVAAPVSTFQRNQRHCFGESSPGEFPLAASPSIVLH 60

Query: 1167 VLTGCNLDPQDLAKLEA 1117
            VLT CNLDPQDLAKLEA
Sbjct: 61   VLTTCNLDPQDLAKLEA 77



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
 Frame = -2

Query: 776 VYSFGSNNSGQLGHGTIEEDWRPRQISSLXXXXXXXXXXXXXRTMLISDAGQVFAIGKD- 600
           VYS G    G+LGHG+  ++  PR I                  ++ + A     +G+D 
Sbjct: 328 VYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLLNLQPM-------VVAAGAWHAAVVGRDG 380

Query: 599 ---SFGEAEYGVQG---SKLVSTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 438
              ++G   YG  G    +  S P++V++L NI  V  A G++ T V+S EG VY+F  G
Sbjct: 381 RVCTWGWGRYGCLGHGNEECESVPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCG 440

Query: 437 NESKLGH 417
             + LGH
Sbjct: 441 ESASLGH 447


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