BLASTX nr result

ID: Panax21_contig00010884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010884
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38293.1| unknown [Lotus japonicus]                               74   1e-11
ref|XP_002329876.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|NP_567591.1| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07
ref|XP_002867901.1| hypothetical protein ARALYDRAFT_492877 [Arab...    59   5e-07
gb|ABK28255.1| unknown [Arabidopsis thaliana]                          59   5e-07

>gb|AFK38293.1| unknown [Lotus japonicus]
          Length = 133

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 39/50 (78%), Positives = 43/50 (86%)
 Frame = -1

Query: 288 YDPLSYSLNFDTNGCGSSLLDEDYYSRFYAFSSRFVANATTTTCPILIVA 139
           YDPLSYSLNFDT GCG +LLDEDYY +FYAFSSRFVAN   T+CP+L VA
Sbjct: 82  YDPLSYSLNFDTTGCG-TLLDEDYY-KFYAFSSRFVAN-PRTSCPVLQVA 128


>ref|XP_002329876.1| predicted protein [Populus trichocarpa] gi|222871113|gb|EEF08244.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 9/62 (14%)
 Frame = -1

Query: 288 YDPLSYSLNFDTNGCGSSLLDEDYYSRFYAFSSRFVAN---------ATTTTCPILIVAT 136
           YDPLSYSLNFDT+GCGS L DEDYY +F AF+SRFVAN         +++++   ++VAT
Sbjct: 78  YDPLSYSLNFDTSGCGSMLDDEDYY-QFCAFTSRFVANPSRSSTSSSSSSSSSSRILVAT 136

Query: 135 SH 130
           SH
Sbjct: 137 SH 138


>ref|NP_567591.1| uncharacterized protein [Arabidopsis thaliana]
           gi|91805605|gb|ABE65531.1| unknown [Arabidopsis
           thaliana] gi|332658854|gb|AEE84254.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 127

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = -1

Query: 288 YDPLSYSLNFDTNGCGSSLLDEDYYSRFYAFSSRFVANATTT 163
           YDP+SYSLNFD   CG+   DEDYY RFYAFSSR+V   TTT
Sbjct: 67  YDPMSYSLNFDGGACGTLPDDEDYYLRFYAFSSRYV---TTT 105


>ref|XP_002867901.1| hypothetical protein ARALYDRAFT_492877 [Arabidopsis lyrata subsp.
           lyrata] gi|297313737|gb|EFH44160.1| hypothetical protein
           ARALYDRAFT_492877 [Arabidopsis lyrata subsp. lyrata]
          Length = 125

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/47 (61%), Positives = 31/47 (65%)
 Frame = -1

Query: 288 YDPLSYSLNFDTNGCGSSLLDEDYYSRFYAFSSRFVANATTTTCPIL 148
           YDPLSYSLNFD   CG+   DEDYY R YAFSSR+V   T    P L
Sbjct: 66  YDPLSYSLNFDGGACGTLPDDEDYYLRLYAFSSRYVTTNTIKKRPPL 112


>gb|ABK28255.1| unknown [Arabidopsis thaliana]
          Length = 128

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = -1

Query: 288 YDPLSYSLNFDTNGCGSSLLDEDYYSRFYAFSSRFVANATTT 163
           YDP+SYSLNFD   CG+   DEDYY RFYAFSSR+V   TTT
Sbjct: 67  YDPMSYSLNFDGGACGTLPDDEDYYLRFYAFSSRYV---TTT 105


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