BLASTX nr result

ID: Panax21_contig00010873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010873
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
gb|ADL36693.1| GATA domain class transcription factor [Malus x d...   182   1e-43
gb|ADL36697.1| GATA domain class transcription factor [Malus x d...   181   2e-43
emb|CBI38005.3| unnamed protein product [Vitis vinifera]              181   2e-43
ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ...   181   2e-43

>ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  187 bits (476), Expect = 2e-45
 Identities = 111/216 (51%), Positives = 126/216 (58%), Gaps = 10/216 (4%)
 Frame = +2

Query: 2   SQFVDDSISGVSLSCPAGNSKEKTGKCAGDVVEPEAKK-FTVLGLQYPVR--TKARTKRS 172
           S FVDDS+S VSL  PA     K  + A +  EPE K  F      +P R  +KARTKRS
Sbjct: 117 SHFVDDSVSDVSLLVPACKGSSK--RHAKNRFEPETKPTFAKTSCLFPSRVPSKARTKRS 174

Query: 173 RPSGRVWSIGL-------LLIAXXXXXXXXXXXXXXXXXXXXXXXXKPPAKKQKRNPDME 331
           RP+GR WS G           +                        + P K  K+ P + 
Sbjct: 175 RPTGRTWSAGSNQSETPSSSTSSTSSMPCLVATNTVQTADSLSWLSEQPMKISKKRPAVH 234

Query: 332 TGSHSSGTQTIRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTF 511
           +    + TQ  RRCSHC VQKTPQWRTGPLG KTLCNACGVR+KSGRLFPEYRPACSPTF
Sbjct: 235 SSGLMASTQFQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTF 294

Query: 512 SVDVHSNSHRKVLEMRRKNQTVEFAEPGFTPMVQSF 619
           S +VHSNSHRKVLEMRRK + V  AEP    MV SF
Sbjct: 295 SSEVHSNSHRKVLEMRRKKE-VAGAEPRLNQMVPSF 329


>gb|ADL36693.1| GATA domain class transcription factor [Malus x domestica]
          Length = 323

 Score =  182 bits (461), Expect = 1e-43
 Identities = 103/213 (48%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
 Frame = +2

Query: 2   SQFVDDSISGVSLSCPAGNSKEKTGKCAGDVVEPEAKKFTVLGLQYPVRTKARTKRSRPS 181
           S FVDDS+  +SL    G  K +         EP+  +       + V  K RTKR R +
Sbjct: 112 SHFVDDSLPDLSLLHTIGVQKPEALLANRSESEPKPAQLRASLFPFEVPVKPRTKRCRLA 171

Query: 182 GRVWSIGLLLI-------AXXXXXXXXXXXXXXXXXXXXXXXXKPPAKKQKRNPDMETGS 340
            R WS+            +                        +P AKKQK+ P ++TG 
Sbjct: 172 SRDWSLSSSSSPSSPSSSSGSGLSFSTPCLIFNPVQSMHVFVGEPAAKKQKKKPAVQTGE 231

Query: 341 HSSGTQTIRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSVD 520
            S G Q  RRCSHC VQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFS D
Sbjct: 232 GSIGGQFQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGD 291

Query: 521 VHSNSHRKVLEMRRKNQTVEFAEPGFTPMVQSF 619
           VHSNSHRKVLEMR++ +  E  EP    M++SF
Sbjct: 292 VHSNSHRKVLEMRKRKEVGE-PEPRLNRMIRSF 323


>gb|ADL36697.1| GATA domain class transcription factor [Malus x domestica]
          Length = 321

 Score =  181 bits (459), Expect = 2e-43
 Identities = 106/213 (49%), Positives = 122/213 (57%), Gaps = 7/213 (3%)
 Frame = +2

Query: 2   SQFVDDSISGVSLSCPAGNSKEKTGKCAGDVVEPEAKKFTVLGLQYP--VRTKARTKRSR 175
           S FVDDS+  +SL    G  K +      +  EPE K   +    +P  V  K RTKR +
Sbjct: 112 SHFVDDSLPDLSLFHTIGTQKPEA--LLMNRFEPEPKPVPLRAPLFPFQVPVKPRTKRYK 169

Query: 176 PSGRVWSIGLLLI-----AXXXXXXXXXXXXXXXXXXXXXXXXKPPAKKQKRNPDMETGS 340
           P+ RVWS                                    +P AKKQK+ P ++TG 
Sbjct: 170 PASRVWSSSSSCSPSSSPCSSGFSFSTPCLIFNPVQSMDVFVGEPAAKKQKKKPAVQTGE 229

Query: 341 HSSGTQTIRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSVD 520
            S G Q  RRCSHC VQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFS  
Sbjct: 230 GSIGGQFQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGA 289

Query: 521 VHSNSHRKVLEMRRKNQTVEFAEPGFTPMVQSF 619
           VHSNSHRKVLEMR++    E  EP    M++SF
Sbjct: 290 VHSNSHRKVLEMRKRKDVGE-PEPLLNRMIRSF 321


>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  181 bits (459), Expect = 2e-43
 Identities = 102/201 (50%), Positives = 117/201 (58%), Gaps = 8/201 (3%)
 Frame = +2

Query: 2   SQFVDDS-ISGVSLSCPAGNSKEKTGKCAGDVVEPEAKKFTVLGLQYPVRTKARTKRSRP 178
           S FVDDS  S +SL CPA      + +C     EP            P+  K R+KR R 
Sbjct: 158 SHFVDDSSASELSLLCPAVTGNSPSKRCEE---EPRPALLRTPLFPTPLPAKPRSKRHRS 214

Query: 179 SGRVWSIGL-------LLIAXXXXXXXXXXXXXXXXXXXXXXXXKPPAKKQKRNPDMETG 337
           SGR W+ G           +                        KPPAKK K++P     
Sbjct: 215 SGRAWAFGSHSPSSSPSSSSSSSSTSCLIFANTVHNMESFYSLEKPPAKKPKKSP----- 269

Query: 338 SHSSGTQTIRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV 517
             S+ +Q  RRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV
Sbjct: 270 --SADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV 327

Query: 518 DVHSNSHRKVLEMRRKNQTVE 580
           ++HSNSHRKVLE+RRK +T E
Sbjct: 328 EIHSNSHRKVLEIRRKKETAE 348


>ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera]
          Length = 317

 Score =  181 bits (459), Expect = 2e-43
 Identities = 102/201 (50%), Positives = 117/201 (58%), Gaps = 8/201 (3%)
 Frame = +2

Query: 2   SQFVDDS-ISGVSLSCPAGNSKEKTGKCAGDVVEPEAKKFTVLGLQYPVRTKARTKRSRP 178
           S FVDDS  S +SL CPA      + +C     EP            P+  K R+KR R 
Sbjct: 123 SHFVDDSSASELSLLCPAVTGNSPSKRCEE---EPRPALLRTPLFPTPLPAKPRSKRHRS 179

Query: 179 SGRVWSIGL-------LLIAXXXXXXXXXXXXXXXXXXXXXXXXKPPAKKQKRNPDMETG 337
           SGR W+ G           +                        KPPAKK K++P     
Sbjct: 180 SGRAWAFGSHSPSSSPSSSSSSSSTSCLIFANTVHNMESFYSLEKPPAKKPKKSP----- 234

Query: 338 SHSSGTQTIRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV 517
             S+ +Q  RRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV
Sbjct: 235 --SADSQPQRRCSHCLVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSV 292

Query: 518 DVHSNSHRKVLEMRRKNQTVE 580
           ++HSNSHRKVLE+RRK +T E
Sbjct: 293 EIHSNSHRKVLEIRRKKETAE 313


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