BLASTX nr result
ID: Panax21_contig00010872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00010872
(1562 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 431 e-173
gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subc... 429 e-168
gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group... 424 e-167
emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group] 429 e-166
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 430 e-164
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 431 bits (1108), Expect(3) = e-173
Identities = 199/357 (55%), Positives = 267/357 (74%), Gaps = 1/357 (0%)
Frame = -3
Query: 1071 LYPMETNEKLFTVAAGPTLLDKIKEAQEKDEDCDNIKKRLAEGDELKYKIDGTGLLRFEG 892
L P E+ +L ++ G ++ D+I E Q DE D IK+++ +G E+ +KI G LRF+G
Sbjct: 997 LNPGESEARLSNLSLGVSIFDEIIEGQVGDEHLDKIKEKMKQGKEIDFKIHEDGSLRFKG 1056
Query: 891 RIWVPL-VPELREEILQEAHSTRYSIHPGSTKMYQDLRQHFWWPNMKRDVAECVSRCLTC 715
R VP +L+ ++ E H+T YS+HPG K+Y+DL+ +WWPNMKR+VAE VS+CLTC
Sbjct: 1057 RWCVPQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDLKVIYWWPNMKREVAEYVSKCLTC 1116
Query: 714 QRVKAEHQRPSGLLQPLEIPEWKWEHITMDFVVGLPATQKGHDAIWVIVDCLTKSAHFLP 535
Q+VK +H+RP G +QPLE+P WKW+ I+MDFV LP ++ G+D IWVIVD LTKSA F+P
Sbjct: 1117 QKVKIDHKRPMGTVQPLEVPGWKWDSISMDFVTALPKSRSGNDTIWVIVDRLTKSAVFIP 1176
Query: 534 IKIRYSLDQLAKLYIKEIILRHGVSVSIVSDRDPRFTSNFWKSLQERMGTQLRMSTAYHP 355
IK + QLA YIK ++ HGV I+SDRD RF S FWK +Q +GT L+MSTA+HP
Sbjct: 1177 IKETWKKKQLATTYIKHVVRLHGVPKDIISDRDSRFLSKFWKKVQANLGTTLKMSTAFHP 1236
Query: 354 QTDGQSERTIQTLEDMLRACVMDFKGSWEDHLPLVEFAYNNSYHASIGMPPYEALYGRKC 175
TDGQ+ERT QT+EDMLRAC +DF+GSWED L L+EF+YNNSYHASI M P+EALYGRKC
Sbjct: 1237 ATDGQTERTNQTMEDMLRACAIDFQGSWEDQLDLIEFSYNNSYHASIKMAPFEALYGRKC 1296
Query: 174 RTPICWDEVGERQLLGPELVQQTVETIKVIRARLVAAQDRQKKYADLHRQKRDFEVG 4
R+PICW++ E +LG E +++TV+ +++I+AR+ AAQDRQK YADL R++ +F VG
Sbjct: 1297 RSPICWNDYSENVVLGTEFIEETVKNVRLIQARIQAAQDRQKSYADLKRREDEFAVG 1353
Score = 127 bits (319), Expect(3) = e-173
Identities = 63/90 (70%), Positives = 69/90 (76%)
Frame = -3
Query: 1560 SFMELKKRLSQASVLALPDNTGGFVVYSDASHKGLGCVLMQHGKVIAYALRQLKDYEKGY 1381
+F LK RL+ A VL LPD GF VYSDAS GLGCVL Q+GKVIAYA QLK YE Y
Sbjct: 833 AFQILKDRLTTAPVLTLPDGNEGFEVYSDASKNGLGCVLQQNGKVIAYASCQLKPYEANY 892
Query: 1380 LTHDLELAAVVFALKIWRHYLYGEKCEIYT 1291
THDLELAA+VFALKIWRHYLYG C+I+T
Sbjct: 893 PTHDLELAAIVFALKIWRHYLYGATCKIFT 922
Score = 100 bits (249), Expect(3) = e-173
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = -2
Query: 1291 DHKSLKYIFT*KELNMRQRR*LKLIKDYDCEILYHPGKANVLADALSRKGREKLLKLTIQ 1112
DHKSLKYIFT K+LNMRQRR L+LIKDYD +I YH GKANV+ADALSRK L L +
Sbjct: 923 DHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLSTLIVP 982
Query: 1111 EELVKYFERLDLEVVSDGD 1055
EEL + +RL+LE+++ G+
Sbjct: 983 EELCRDMKRLNLEILNPGE 1001
>gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2174
Score = 429 bits (1103), Expect(3) = e-168
Identities = 202/342 (59%), Positives = 252/342 (73%)
Frame = -3
Query: 1029 AGPTLLDKIKEAQEKDEDCDNIKKRLAEGDELKYKIDGTGLLRFEGRIWVPLVPELREEI 850
A PTL+D+++EAQ D D IKK + G + + D G + RI VP +L++ I
Sbjct: 1685 AKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKDLKDAI 1744
Query: 849 LQEAHSTRYSIHPGSTKMYQDLRQHFWWPNMKRDVAECVSRCLTCQRVKAEHQRPSGLLQ 670
L+EAH T YSIHPGSTKMYQDL++ FWW +MKR++AE V+ C CQRVKAEHQ+P+GLLQ
Sbjct: 1745 LKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1804
Query: 669 PLEIPEWKWEHITMDFVVGLPATQKGHDAIWVIVDCLTKSAHFLPIKIRYSLDQLAKLYI 490
PL+IPEWKWE I MDF+ GLP T GHD+IWVIVD LTK AHF+P+K YS +LA+LY+
Sbjct: 1805 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1864
Query: 489 KEIILRHGVSVSIVSDRDPRFTSNFWKSLQERMGTQLRMSTAYHPQTDGQSERTIQTLED 310
I+ HGV IVSDR +FTSNFWK LQE MG++L STAYHPQTDGQ+ER Q LED
Sbjct: 1865 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1924
Query: 309 MLRACVMDFKGSWEDHLPLVEFAYNNSYHASIGMPPYEALYGRKCRTPICWDEVGERQLL 130
MLRAC +DF GSW+ +LP EF+YNNSY AS+ M PYEALYGRKCRTP+ WD+ GERQ+
Sbjct: 1925 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVF 1984
Query: 129 GPELVQQTVETIKVIRARLVAAQDRQKKYADLHRQKRDFEVG 4
G +++++ E +K+I+ RL AQ R K YAD R+ FE G
Sbjct: 1985 GTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEG 2026
Score = 121 bits (303), Expect(3) = e-168
Identities = 59/90 (65%), Positives = 68/90 (75%)
Frame = -3
Query: 1560 SFMELKKRLSQASVLALPDNTGGFVVYSDASHKGLGCVLMQHGKVIAYALRQLKDYEKGY 1381
SF ELK RL A +L LPD GF V+ DAS GLGCVLMQ GKV+AYA RQL+ +EK Y
Sbjct: 1510 SFQELKSRLISAPILILPDPKKGFQVHCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 1569
Query: 1380 LTHDLELAAVVFALKIWRHYLYGEKCEIYT 1291
THD+ELAAVV ALKIW HYL+G + E+YT
Sbjct: 1570 PTHDIELAAVVHALKIWHHYLFGTRTEVYT 1599
Score = 90.9 bits (224), Expect(3) = e-168
Identities = 51/79 (64%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = -2
Query: 1291 DHKSLKYIFT*KELNMRQRR*LKLIKDYDCEILYHPGKANVLADALSRKGREKLLK-LTI 1115
DHKSLKYIFT +LNMRQRR L+LIKDYD I YHPGKANV+ADALSRKG + +
Sbjct: 1600 DHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQL 1659
Query: 1114 QEELVKYFERLDLEVVSDG 1058
EL K FERL+L +V G
Sbjct: 1660 PLELCKEFERLNLGIVDRG 1678
>gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015280|gb|AAQ56471.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1735
Score = 424 bits (1091), Expect(3) = e-167
Identities = 200/342 (58%), Positives = 251/342 (73%)
Frame = -3
Query: 1029 AGPTLLDKIKEAQEKDEDCDNIKKRLAEGDELKYKIDGTGLLRFEGRIWVPLVPELREEI 850
A PTL+D+++EAQ D D IKK + G + + D G + RI VP +L++ I
Sbjct: 1246 AKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAI 1305
Query: 849 LQEAHSTRYSIHPGSTKMYQDLRQHFWWPNMKRDVAECVSRCLTCQRVKAEHQRPSGLLQ 670
L+EAH T YSIHPGSTK+YQDL++ FWW +MKR++AE V+ C CQRVKAEHQ+P+GLLQ
Sbjct: 1306 LKEAHDTLYSIHPGSTKVYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQ 1365
Query: 669 PLEIPEWKWEHITMDFVVGLPATQKGHDAIWVIVDCLTKSAHFLPIKIRYSLDQLAKLYI 490
PL+IPEWKWE I MDF+ GLP T GHD+IWVIVD LTK AHF+P+K YS +LA+LY+
Sbjct: 1366 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1425
Query: 489 KEIILRHGVSVSIVSDRDPRFTSNFWKSLQERMGTQLRMSTAYHPQTDGQSERTIQTLED 310
I+ HGV IVSDR +FTSNFWK LQE M ++L STAYHPQTDGQ+ER Q LED
Sbjct: 1426 ARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMVSKLNFSTAYHPQTDGQTERVNQILED 1485
Query: 309 MLRACVMDFKGSWEDHLPLVEFAYNNSYHASIGMPPYEALYGRKCRTPICWDEVGERQLL 130
MLRAC +DF GSW+ +LP EF+YNNSY AS+ M PYEALYGRKCRTP+ WD+ GERQ+
Sbjct: 1486 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVF 1545
Query: 129 GPELVQQTVETIKVIRARLVAAQDRQKKYADLHRQKRDFEVG 4
G +++++ E +K+I+ RL AQ R K YAD R+ FE G
Sbjct: 1546 GTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEG 1587
Score = 122 bits (307), Expect(3) = e-167
Identities = 61/90 (67%), Positives = 68/90 (75%)
Frame = -3
Query: 1560 SFMELKKRLSQASVLALPDNTGGFVVYSDASHKGLGCVLMQHGKVIAYALRQLKDYEKGY 1381
SF ELK RL A +L LPD GF VY DAS GLGCVLMQ GKV+AYA RQL+ +EK Y
Sbjct: 1071 SFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 1130
Query: 1380 LTHDLELAAVVFALKIWRHYLYGEKCEIYT 1291
THDLELAAVV ALKIW HYL+G + E+YT
Sbjct: 1131 PTHDLELAAVVHALKIWCHYLFGTRTEVYT 1160
Score = 92.4 bits (228), Expect(3) = e-167
Identities = 52/79 (65%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = -2
Query: 1291 DHKSLKYIFT*KELNMRQRR*LKLIKDYDCEILYHPGKANVLADALSRKGREKLLK-LTI 1115
DHKSLKYIFT +LNMRQRR L+LIKDYD I YHPGKANV+ADALSRKG + +
Sbjct: 1161 DHKSLKYIFTQPDLNMRQRRWLELIKDYDMGIHYHPGKANVVADALSRKGYCNATEGRQL 1220
Query: 1114 QEELVKYFERLDLEVVSDG 1058
EL K FERL+L +VS G
Sbjct: 1221 PLELCKEFERLNLGIVSRG 1239
>emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group]
Length = 1581
Score = 429 bits (1102), Expect(3) = e-166
Identities = 200/342 (58%), Positives = 251/342 (73%)
Frame = -3
Query: 1029 AGPTLLDKIKEAQEKDEDCDNIKKRLAEGDELKYKIDGTGLLRFEGRIWVPLVPELREEI 850
A PTL+D+++EAQ D D IKK + G + + D G + RI VP +L++ I
Sbjct: 1092 AKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFFEDEQGTVWLGERICVPDNKDLKDAI 1151
Query: 849 LQEAHSTRYSIHPGSTKMYQDLRQHFWWPNMKRDVAECVSRCLTCQRVKAEHQRPSGLLQ 670
++EAH T YSIHPGSTKMYQDL++ FWW +MKR++AECV+ C CQRVKAEHQ+P+GLLQ
Sbjct: 1152 MKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAECVAVCDVCQRVKAEHQKPAGLLQ 1211
Query: 669 PLEIPEWKWEHITMDFVVGLPATQKGHDAIWVIVDCLTKSAHFLPIKIRYSLDQLAKLYI 490
PL+IPEWKWE I MDF+ GLP T GHD+IWVIVD LTK AHF+P+K YS +LA+LY+
Sbjct: 1212 PLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYM 1271
Query: 489 KEIILRHGVSVSIVSDRDPRFTSNFWKSLQERMGTQLRMSTAYHPQTDGQSERTIQTLED 310
I+ HGV IVSDR +FTS FWK QE MG++L STAYHPQTDGQ+ER Q LED
Sbjct: 1272 ARIVCLHGVPKKIVSDRGSQFTSKFWKKFQEEMGSKLNFSTAYHPQTDGQTERVNQILED 1331
Query: 309 MLRACVMDFKGSWEDHLPLVEFAYNNSYHASIGMPPYEALYGRKCRTPICWDEVGERQLL 130
MLRAC +DF GSW+ +LP EF+YNNSY AS+ M PYEALYGRKCRTP+ WD+ GERQ+
Sbjct: 1332 MLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVF 1391
Query: 129 GPELVQQTVETIKVIRARLVAAQDRQKKYADLHRQKRDFEVG 4
G +++++ E +K+I+ RL AQ R K YAD R+ FE G
Sbjct: 1392 GTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEG 1433
Score = 120 bits (301), Expect(3) = e-166
Identities = 59/90 (65%), Positives = 66/90 (73%)
Frame = -3
Query: 1560 SFMELKKRLSQASVLALPDNTGGFVVYSDASHKGLGCVLMQHGKVIAYALRQLKDYEKGY 1381
SF ELK RL A +L LPD GF VY DAS GLGCVLMQ GKV+AYA QL+ +EK Y
Sbjct: 917 SFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASHQLRPHEKNY 976
Query: 1380 LTHDLELAAVVFALKIWRHYLYGEKCEIYT 1291
HDLELAAVV LKIWRHYL+G + E+YT
Sbjct: 977 PAHDLELAAVVHVLKIWRHYLFGTRTEVYT 1006
Score = 87.4 bits (215), Expect(3) = e-166
Identities = 50/79 (63%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -2
Query: 1291 DHKSLKYIFT*KELNMRQRR*LKLIKDYDCEILYHPGKANVLADALSRKGREKLLK-LTI 1115
DHKSLKYIFT +LNMRQRR L+LIKDYD I YH G ANV+ADALSRKG + +
Sbjct: 1007 DHKSLKYIFTQPDLNMRQRRWLELIKDYDLGIHYHAGMANVVADALSRKGYCNAMDGRQL 1066
Query: 1114 QEELVKYFERLDLEVVSDG 1058
EL K FERL+L +VS G
Sbjct: 1067 PLELCKEFERLNLGIVSRG 1085
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 430 bits (1106), Expect(3) = e-164
Identities = 199/338 (58%), Positives = 259/338 (76%)
Frame = -3
Query: 1017 LLDKIKEAQEKDEDCDNIKKRLAEGDELKYKIDGTGLLRFEGRIWVPLVPELREEILQEA 838
LLD I+ Q++D ++K+ E + Y++D G L + R+ VP V LR++++ EA
Sbjct: 665 LLDDIRAKQDEDPVLVDLKRVAREKPTVGYQLDKNGHLWYGDRLCVPDVDGLRQQVMDEA 724
Query: 837 HSTRYSIHPGSTKMYQDLRQHFWWPNMKRDVAECVSRCLTCQRVKAEHQRPSGLLQPLEI 658
H +++HPGSTKMY+DL++ +WW MK ++AE V++C TCQRVKAEH+RP GLL+PLE+
Sbjct: 725 HKIAFAVHPGSTKMYRDLKERYWWLGMKLNIAEFVAKCDTCQRVKAEHRRPGGLLKPLEV 784
Query: 657 PEWKWEHITMDFVVGLPATQKGHDAIWVIVDCLTKSAHFLPIKIRYSLDQLAKLYIKEII 478
PEWKWE+ITMDF+ GLP T+ GHD IWVIVD LTKSAHFLP K+ + + +LY+ I+
Sbjct: 785 PEWKWENITMDFITGLPRTKSGHDMIWVIVDRLTKSAHFLPCKVDMPIKKFTQLYLDNIV 844
Query: 477 LRHGVSVSIVSDRDPRFTSNFWKSLQERMGTQLRMSTAYHPQTDGQSERTIQTLEDMLRA 298
HGV +SIVSDRD RF S+FWK LQ+ T+ +STA+HPQTDGQSERTIQTLEDMLRA
Sbjct: 845 RLHGVPLSIVSDRDSRFISHFWKGLQKAFETKTDLSTAFHPQTDGQSERTIQTLEDMLRA 904
Query: 297 CVMDFKGSWEDHLPLVEFAYNNSYHASIGMPPYEALYGRKCRTPICWDEVGERQLLGPEL 118
CV++ GSW+D L + EFAYNNSYHAS+GMPP+EALYGRKCRTP+ WDEVGE+Q GPEL
Sbjct: 905 CVLEVGGSWDDFLSVAEFAYNNSYHASLGMPPFEALYGRKCRTPLYWDEVGEKQYTGPEL 964
Query: 117 VQQTVETIKVIRARLVAAQDRQKKYADLHRQKRDFEVG 4
V+Q E +++IR L AAQDRQK +AD+ R+ +F VG
Sbjct: 965 VEQAKEKVELIRKNLKAAQDRQKSWADIRRRPLEFAVG 1002
Score = 119 bits (298), Expect(3) = e-164
Identities = 61/90 (67%), Positives = 70/90 (77%)
Frame = -3
Query: 1560 SFMELKKRLSQASVLALPDNTGGFVVYSDASHKGLGCVLMQHGKVIAYALRQLKDYEKGY 1381
+F LK +L+ A VLALP+ + VY+DAS +GLGCVLMQ GKVIAYA RQLK +EK Y
Sbjct: 486 AFQTLKDKLTVAPVLALPEVFDNYDVYTDASGQGLGCVLMQAGKVIAYASRQLKVHEKNY 545
Query: 1380 LTHDLELAAVVFALKIWRHYLYGEKCEIYT 1291
THDLELAAVVFALK WRHYLYG K I+T
Sbjct: 546 PTHDLELAAVVFALKQWRHYLYGVKARIFT 575
Score = 80.9 bits (198), Expect(3) = e-164
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = -2
Query: 1291 DHKSLKYIFT*KELNMRQRR*LKLIKDYDCEILYHPGKANVLADALSRKGREKLLKLTIQ 1112
DHKSLK+ FT + LNMRQRR L+ +KDYD +I YHPGKANV+ADALSR+ + +T
Sbjct: 576 DHKSLKFFFTQENLNMRQRRWLEFVKDYDLDIQYHPGKANVVADALSRR---PVNAITTL 632
Query: 1111 EELVKYFERLDLEVV 1067
+E++ + L ++VV
Sbjct: 633 QEVIHQLDSLQIQVV 647