BLASTX nr result

ID: Panax21_contig00010870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010870
         (2354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   799   0.0  
ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|2...   785   0.0  
ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putativ...   761   0.0  
gb|ADE05571.1| increased size exclusion limit 1a [Nicotiana bent...   757   0.0  
gb|ADE05572.1| increased size exclusion limit 1b [Nicotiana bent...   740   0.0  

>ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial
            [Vitis vinifera] gi|147852111|emb|CAN82264.1|
            hypothetical protein VITISV_009282 [Vitis vinifera]
          Length = 557

 Score =  799 bits (2063), Expect = 0.0
 Identities = 413/556 (74%), Positives = 472/556 (84%), Gaps = 2/556 (0%)
 Frame = -2

Query: 2173 MTVLVATRVLFLVGDSLSVRKFSQVSRTAALRRNIRLFSRISRDNGPLSLTSLGFRNELE 1994
            M  L +TR+L LVGD L V K   VSR      ++R  SR+ R++GPL+L SLGF++E E
Sbjct: 1    MQALASTRLLLLVGDCLPVGKLLHVSR---FHGSVRFLSRVDREHGPLTLASLGFKSEFE 57

Query: 1993 TTMKDETNNLQKIISTVEFPKSKVKGGRSTGIKAVRERKSLEIEDAPFSAKSFSELGLPS 1814
            TT  ++T  L ++ +  E  K+KVK  RS  +KAV  +KS+EIE APF+AKSFSELGLP 
Sbjct: 58   TTKGNKTKPLHQLNAVPEVSKNKVKAVRSNEMKAVGTKKSIEIEAAPFAAKSFSELGLPP 117

Query: 1813 LLIERLEREGFTVPTDVQSSAIPTILKKHDVVVQSYTGSGKTLAYLLPILSEVGLLKKEI 1634
            LLI+RLEREGF+VPTDVQS+AIPTILK HDVV+QSYTGSGKTLAYLLPILSEVG LK + 
Sbjct: 118  LLIDRLEREGFSVPTDVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLKNKP 177

Query: 1633 PNCDKP-RKKMDIEAVIVAPSRELGMQIVREVEKLLGPTDKKLVQQLVGGANRSRQEEAL 1457
            PN D   R KM+IEAVI+APSRELGMQIVREVEKLLGP DKKLVQQLVGGANR+RQEEAL
Sbjct: 178  PNADNTSRNKMEIEAVILAPSRELGMQIVREVEKLLGPADKKLVQQLVGGANRTRQEEAL 237

Query: 1456 KKNKPAIIVGTPGRIAEISASGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGKRS 1277
            KKNKP+I+VGTPGRIAE+SASGKL TH CRYLVLDEVDELLSFNFREDMHRILEHVG+RS
Sbjct: 238  KKNKPSIVVGTPGRIAEMSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRS 297

Query: 1276 GAGTNDSKSPLARLAGRQTIMVSATVPFSVVRAARSWGHDPLLVQAKKVVPLESITPSGP 1097
            GA  + +KSPL R   RQTIMVSATVPFSV+RAARSWG DPLLVQAK V+PLES+ P+GP
Sbjct: 298  GADPHGTKSPLERRTERQTIMVSATVPFSVIRAARSWGRDPLLVQAKSVIPLESL-PTGP 356

Query: 1096 GNLAGPXXXXXXXSDMQTQSAVQSLPPALKHYYCIARVQHKVDTLRRCVHALDAKSVIAF 917
             NL GP       S +QTQ+A + LPP LKHY+C+ ++QHK+DTLRRCVHALDAK VIAF
Sbjct: 357  VNLLGPTSTSSSSSSLQTQAAAEGLPPVLKHYFCVTKLQHKIDTLRRCVHALDAKCVIAF 416

Query: 916  MNHTRQLKDAVYKLEARGMNAAELHGDLGKLARSTILKRFKSGEVRVLVTNELSARGLDV 737
            MNHT++LKDAV+KLEARGM AAELHGDLGKLARST LK+FK+GEVRVLVTNELSARGLDV
Sbjct: 417  MNHTKRLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 476

Query: 736  PECDLVVNLELPTDSIHYAHRAGRTGRLGRKGSVVTICEEREIFVVKKLQKQLAVPIQSC 557
             ECDLVVNL+LPTDSIHYAHRAGRTGRLGRKG+VV ICEE E+FVVKKLQ+QL VPIQ+C
Sbjct: 477  SECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVNICEEPEVFVVKKLQRQLGVPIQAC 536

Query: 556  EFSEGKLL-VTEEEKT 512
            EF+EGKL+  T+EEKT
Sbjct: 537  EFTEGKLVATTDEEKT 552


>ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|222841004|gb|EEE78551.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score =  785 bits (2027), Expect = 0.0
 Identities = 406/557 (72%), Positives = 471/557 (84%), Gaps = 4/557 (0%)
 Frame = -2

Query: 2173 MTVLVATRVLFLVGDSLSVRKFSQVSRTAALRRNIRLFSRISRD-NGPLSLTSLGFRNEL 1997
            M  LV+ R+LFLVG+++ ++K S+ S +A  +R++R FSR+ RD N PL+L +LGF  E 
Sbjct: 1    MPSLVSPRLLFLVGETIHLKKLSRGSSSALCQRSVRFFSRVDRDKNAPLTLANLGFNTEF 60

Query: 1996 ETTMKDETNNLQ--KIISTVEFPKSKVKGGRSTGIKAVRERKSLEIEDAPFSAKSFSELG 1823
            ETT K++ N L+  K+   +E PKS+ K   S   + VR +K+LEIE APF+AKSFSELG
Sbjct: 61   ETTTKNKRNKLENVKVNYPIEAPKSREKVATSNKSRVVRVKKTLEIESAPFAAKSFSELG 120

Query: 1822 LPSLLIERLEREGFTVPTDVQSSAIPTILKKHDVVVQSYTGSGKTLAYLLPILSEVGLLK 1643
            LP  LIERLEREGF VPTDVQS+AIPTILK HD V+QSYTGSGKTLAY+LPILSEVG LK
Sbjct: 121  LPPPLIERLEREGFNVPTDVQSAAIPTILKNHDAVIQSYTGSGKTLAYVLPILSEVGPLK 180

Query: 1642 KEIPNCDKPR-KKMDIEAVIVAPSRELGMQIVREVEKLLGPTDKKLVQQLVGGANRSRQE 1466
                + DK   KK +IEAV+VAPSREL MQIVREVEKLLGP +K++VQQLVGGANRSRQE
Sbjct: 181  NNYSSADKETGKKTEIEAVVVAPSRELAMQIVREVEKLLGPENKRVVQQLVGGANRSRQE 240

Query: 1465 EALKKNKPAIIVGTPGRIAEISASGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVG 1286
            EALKKNKP I+VGTPGRIAEISA+GKLHTH CR+LVLDEVDELLSFNFR+D+HRILEHVG
Sbjct: 241  EALKKNKPLIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDELLSFNFRQDIHRILEHVG 300

Query: 1285 KRSGAGTNDSKSPLARLAGRQTIMVSATVPFSVVRAARSWGHDPLLVQAKKVVPLESITP 1106
            +RSGA     K+ L R A R+TIMVSATVPFSVVRAARSW  DPLLVQAK V+PLES+ P
Sbjct: 301  RRSGADPQGQKNSLVRWADRRTIMVSATVPFSVVRAARSWACDPLLVQAKSVIPLESLAP 360

Query: 1105 SGPGNLAGPXXXXXXXSDMQTQSAVQSLPPALKHYYCIARVQHKVDTLRRCVHALDAKSV 926
             G  NL+ P       S++Q Q+ VQSLPPALKHYYC+ R+QHKVDTLRRCVHAL+A+SV
Sbjct: 361  -GTVNLSSPTSSSNSDSNLQHQATVQSLPPALKHYYCVTRLQHKVDTLRRCVHALNAQSV 419

Query: 925  IAFMNHTRQLKDAVYKLEARGMNAAELHGDLGKLARSTILKRFKSGEVRVLVTNELSARG 746
            IAFMNHTRQLKDAV+KLEARGM AAELHGDLGKL RSTILK+FKSGEVRVLVTNEL+ARG
Sbjct: 420  IAFMNHTRQLKDAVFKLEARGMKAAELHGDLGKLGRSTILKKFKSGEVRVLVTNELAARG 479

Query: 745  LDVPECDLVVNLELPTDSIHYAHRAGRTGRLGRKGSVVTICEEREIFVVKKLQKQLAVPI 566
            LDVPECDLVVNL+LPTDSIHYAHRAGRTGRLGRKG+VVTICEERE+FVVKKLQKQL VPI
Sbjct: 480  LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEEREVFVVKKLQKQLGVPI 539

Query: 565  QSCEFSEGKLLVTEEEK 515
             +C+F+EGKL+VT++E+
Sbjct: 540  PACDFTEGKLIVTDKEE 556


>ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549643|gb|EEF51131.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 595

 Score =  761 bits (1966), Expect = 0.0
 Identities = 401/558 (71%), Positives = 461/558 (82%), Gaps = 4/558 (0%)
 Frame = -2

Query: 2176 KMTVLVATRVLFLVGDSLSVRKFSQVSRTAALRRNIRLFSRISRDNGPLSLTSLGFRNEL 1997
            KM  LV+TR+LFL G S  + K  +VSRT    RN+  +S++ +D  PL+L SLG +++ 
Sbjct: 31   KMPALVSTRLLFLFGLSSPLPKLLRVSRTGWCHRNVLFYSQVRQDQAPLTLESLGIKSQF 90

Query: 1996 ETTMK-DETNNLQKII--STVEFPKSKVKGGRSTGIKAVRERKSLEIEDAPFSAKSFSEL 1826
            E   K  +TN  +K    S ++ P+SKVK     G + V   KSLE E A F+AKSFSEL
Sbjct: 91   ERKEKITKTNKHEKFKQNSAIDVPRSKVKVVNK-GTRDVSVNKSLEDETALFAAKSFSEL 149

Query: 1825 GLPSLLIERLEREGFTVPTDVQSSAIPTILKKHDVVVQSYTGSGKTLAYLLPILSEVG-L 1649
            GLP LL+ERLE EGF VPT+VQS+AIPTILK HDVV+QSYTGSGKTLAYLLPILSEVG L
Sbjct: 150  GLPPLLLERLESEGFKVPTEVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPL 209

Query: 1648 LKKEIPNCDKPRKKMDIEAVIVAPSRELGMQIVREVEKLLGPTDKKLVQQLVGGANRSRQ 1469
            + K     ++  KK +IEAVIVAPSREL MQIVREVEKLLGP +KK VQQLVGGANRSRQ
Sbjct: 210  IDKSSKGNEEVGKKSEIEAVIVAPSRELAMQIVREVEKLLGPANKKAVQQLVGGANRSRQ 269

Query: 1468 EEALKKNKPAIIVGTPGRIAEISASGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHV 1289
            EEAL+KNKPAIIVGTPGRI+EISA+GKLHTH CRYLVLDEVDELLSFNFRED+HRIL+HV
Sbjct: 270  EEALRKNKPAIIVGTPGRISEISAAGKLHTHGCRYLVLDEVDELLSFNFREDVHRILDHV 329

Query: 1288 GKRSGAGTNDSKSPLARLAGRQTIMVSATVPFSVVRAARSWGHDPLLVQAKKVVPLESIT 1109
            G+RS A ++   S LAR A RQTI+VSATVPFSV+RAARSWGHDPLLVQAK V+PLES+ 
Sbjct: 330  GRRSNADSHGPNSQLARRAARQTILVSATVPFSVIRAARSWGHDPLLVQAKTVIPLESVP 389

Query: 1108 PSGPGNLAGPXXXXXXXSDMQTQSAVQSLPPALKHYYCIARVQHKVDTLRRCVHALDAKS 929
             S P N +GP       S+ Q Q+A+QSLPPALKHYYC+ R+QHKVDTLRRCVHALDAKS
Sbjct: 390  ASRPVNASGPISSSSSNSNPQPQAAIQSLPPALKHYYCVTRIQHKVDTLRRCVHALDAKS 449

Query: 928  VIAFMNHTRQLKDAVYKLEARGMNAAELHGDLGKLARSTILKRFKSGEVRVLVTNELSAR 749
            VIAFMN TRQLKDAV+KLEARGM AAELHGDLGKL+RSTILK+FK+GEVRVLVTNELSAR
Sbjct: 450  VIAFMNQTRQLKDAVFKLEARGMKAAELHGDLGKLSRSTILKKFKNGEVRVLVTNELSAR 509

Query: 748  GLDVPECDLVVNLELPTDSIHYAHRAGRTGRLGRKGSVVTICEEREIFVVKKLQKQLAVP 569
            GLDVPECDLVVNL+LPTDSIHYAHRAGRTGRLGRKG+VVTICEE E+FVVKK+QKQL + 
Sbjct: 510  GLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKMQKQLGIT 569

Query: 568  IQSCEFSEGKLLVTEEEK 515
            I +CEF+EGKL +T EE+
Sbjct: 570  IPTCEFTEGKLSMTVEEE 587


>gb|ADE05571.1| increased size exclusion limit 1a [Nicotiana benthamiana]
          Length = 551

 Score =  757 bits (1955), Expect = 0.0
 Identities = 391/557 (70%), Positives = 460/557 (82%), Gaps = 6/557 (1%)
 Frame = -2

Query: 2173 MTVLVATRVLFLVGDSLSVRKFSQVSRTAALRRNIRLFSRISRDNGPLSLTSLGFRNELE 1994
            M VLV TR L LVGDSLS+R  SQ +R A  R  +R  S    D+G L+L SLG ++E++
Sbjct: 1    MPVLVLTRALLLVGDSLSLRNVSQFTRIAPFRDKVRFLS----DSGSLTLASLGLKSEVK 56

Query: 1993 TTMKDETNNLQKIISTVEFPKSKVK---GGRSTGIKAVRERKSLEIEDAPFSAKSFSELG 1823
            T   +E N LQ+ +ST+E PKS+VK    G  TG+  ++ER  ++I+ APF+A+SFSELG
Sbjct: 57   TVSANEKNKLQQGVSTIEVPKSRVKKKVSGNKTGL--IKERNPIDIKTAPFAAESFSELG 114

Query: 1822 LPSLLIERLEREGFTVPTDVQSSAIPTILKKHDVVVQSYTGSGKTLAYLLPILSEVGLLK 1643
             P LL+ERLE EGFTVPTDVQ++A+PT+LK HDVV+QSYTGSGKTLAY+LPILS+ G L 
Sbjct: 115  PPPLLVERLEEEGFTVPTDVQAAAVPTVLKNHDVVIQSYTGSGKTLAYVLPILSQAGPLS 174

Query: 1642 KEIPNCDKPRKKMDIEAVIVAPSRELGMQIVREVEKLLGPTDKKLVQQLVGGANRSRQEE 1463
             EI N  +   K+ IEAVIVAPSRELGMQIVREVEKLLGP DKKLVQQLVGGANRSRQEE
Sbjct: 175  GEISNGCETGNKVGIEAVIVAPSRELGMQIVREVEKLLGPADKKLVQQLVGGANRSRQEE 234

Query: 1462 ALKKNKPAIIVGTPGRIAEISASGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGK 1283
            AL+KNKPAI+VGTPGRIAEISA+GKL TH CRYLVLDEVD+LL+ NFREDM RIL+HVG+
Sbjct: 235  ALRKNKPAIVVGTPGRIAEISAAGKLPTHGCRYLVLDEVDQLLAVNFREDMQRILDHVGR 294

Query: 1282 RSGAG---TNDSKSPLARLAGRQTIMVSATVPFSVVRAARSWGHDPLLVQAKKVVPLESI 1112
            R GA    +N   SPL + + RQTIMVSATVPFSV+RAARSWG DPLLVQA KVVPLES+
Sbjct: 295  RPGASGGESNSPNSPLVKRSARQTIMVSATVPFSVIRAARSWGCDPLLVQANKVVPLESV 354

Query: 1111 TPSGPGNLAGPXXXXXXXSDMQTQSAVQSLPPALKHYYCIARVQHKVDTLRRCVHALDAK 932
             PSGP N++G        S++Q   +VQSLPP L+HYY I R+QHKVD LRRCVHALDAK
Sbjct: 355  PPSGPVNISGTPPTASSSSNVQAMPSVQSLPPNLQHYYTITRIQHKVDMLRRCVHALDAK 414

Query: 931  SVIAFMNHTRQLKDAVYKLEARGMNAAELHGDLGKLARSTILKRFKSGEVRVLVTNELSA 752
             VIAFMNHT+QLKDAV+KLEARGM AAELHGDL KL RSTILK+F++GEVRVL+TNELSA
Sbjct: 415  CVIAFMNHTKQLKDAVFKLEARGMKAAELHGDLSKLVRSTILKKFRNGEVRVLLTNELSA 474

Query: 751  RGLDVPECDLVVNLELPTDSIHYAHRAGRTGRLGRKGSVVTICEEREIFVVKKLQKQLAV 572
            RGLD+PECDLVVNL LPTDS+HYAHRAGRTGRLGRKG+VVTICE+ E+FVVKKLQKQL++
Sbjct: 475  RGLDLPECDLVVNLGLPTDSVHYAHRAGRTGRLGRKGTVVTICEDPEVFVVKKLQKQLSL 534

Query: 571  PIQSCEFSEGKLLVTEE 521
             IQ+CEFS+G L++TE+
Sbjct: 535  SIQACEFSDGNLVITED 551


>gb|ADE05572.1| increased size exclusion limit 1b [Nicotiana benthamiana]
          Length = 548

 Score =  740 bits (1910), Expect = 0.0
 Identities = 382/554 (68%), Positives = 454/554 (81%), Gaps = 3/554 (0%)
 Frame = -2

Query: 2173 MTVLVATRVLFLVGDSLSVRKFSQVSRTAALRRNIRLFSRISRDNGPLSLTSLGFRNELE 1994
            M VLV TR L LVGDSL +R  S  +R A  R  +   S    D+G L+L SLG +NE++
Sbjct: 1    MPVLVLTRALLLVGDSLFLRNVSPFTRIAPFRDKVGFLS----DSGSLTLASLGLKNEVK 56

Query: 1993 TTMKDETNNLQKIISTVEFPKSKVK---GGRSTGIKAVRERKSLEIEDAPFSAKSFSELG 1823
            T   +E + L++ +ST+E PKS+VK    G  TG+  ++ER  ++I+ APF+A+SFSELG
Sbjct: 57   TVGANEKDKLRQGVSTIEVPKSRVKKKVSGNKTGL--IKERNPIDIKTAPFAAESFSELG 114

Query: 1822 LPSLLIERLEREGFTVPTDVQSSAIPTILKKHDVVVQSYTGSGKTLAYLLPILSEVGLLK 1643
            LP LL+ERLE+EGFT+PTDVQ++A+PT+LK HDVV+QSYTGSGKTLAY+LPILS+VG L 
Sbjct: 115  LPPLLVERLEKEGFTIPTDVQAAAVPTVLKNHDVVIQSYTGSGKTLAYVLPILSQVGPLS 174

Query: 1642 KEIPNCDKPRKKMDIEAVIVAPSRELGMQIVREVEKLLGPTDKKLVQQLVGGANRSRQEE 1463
             EI N  +   K  IEAVIVAPSRELGMQIVRE+EKLLGP DKKLVQQLVGGANRSRQEE
Sbjct: 175  GEISNGSETGNKAGIEAVIVAPSRELGMQIVRELEKLLGPADKKLVQQLVGGANRSRQEE 234

Query: 1462 ALKKNKPAIIVGTPGRIAEISASGKLHTHDCRYLVLDEVDELLSFNFREDMHRILEHVGK 1283
            AL+KNKPAI+VGTPG IAEISA+GKL TH C YLVLDEVD+LL+ NFREDM RIL+HVG+
Sbjct: 235  ALRKNKPAIVVGTPGWIAEISAAGKLPTHGCCYLVLDEVDQLLAVNFREDMQRILDHVGR 294

Query: 1282 RSGAGTNDSKSPLARLAGRQTIMVSATVPFSVVRAARSWGHDPLLVQAKKVVPLESITPS 1103
            R GA   +S SPL + + RQTIMVSATVPFSV+RAARSWG +PLLVQA KVV LES+  S
Sbjct: 295  RPGACRGESSSPLVKRSARQTIMVSATVPFSVIRAARSWGCNPLLVQANKVVALESVPSS 354

Query: 1102 GPGNLAGPXXXXXXXSDMQTQSAVQSLPPALKHYYCIARVQHKVDTLRRCVHALDAKSVI 923
            GP N++G        S++Q   +VQSLPP L+HYY I R+QHKVD LRRCVHALDAK VI
Sbjct: 355  GPVNISGTPPTASSSSNVQAMPSVQSLPPNLQHYYTITRIQHKVDMLRRCVHALDAKCVI 414

Query: 922  AFMNHTRQLKDAVYKLEARGMNAAELHGDLGKLARSTILKRFKSGEVRVLVTNELSARGL 743
            AFMNHT+QLKDAV+KLEARGM AAELHGDL KL RSTILK+F++GEVRVL+TNELSARGL
Sbjct: 415  AFMNHTKQLKDAVFKLEARGMKAAELHGDLSKLVRSTILKKFRNGEVRVLLTNELSARGL 474

Query: 742  DVPECDLVVNLELPTDSIHYAHRAGRTGRLGRKGSVVTICEEREIFVVKKLQKQLAVPIQ 563
            D+PECDLVVNL LPTDS+HYAHRAGRTGRLGRKG+VV ICEE E+FVVKKLQKQL++ IQ
Sbjct: 475  DLPECDLVVNLGLPTDSVHYAHRAGRTGRLGRKGTVVIICEEPEVFVVKKLQKQLSLSIQ 534

Query: 562  SCEFSEGKLLVTEE 521
            +CEFS+G L++TE+
Sbjct: 535  ACEFSDGNLVITED 548


Top