BLASTX nr result

ID: Panax21_contig00010828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010828
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis...    74   1e-11
gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [S...    73   5e-11
ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [...    67   5e-10
ref|XP_004148381.1| PREDICTED: 60S ribosomal protein L7-1-like [...    67   5e-10
ref|XP_004163768.1| PREDICTED: 60S ribosomal protein L7-1-like, ...    67   5e-10

>ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis vinifera]
           gi|297745096|emb|CBI38935.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score = 74.3 bits (181), Expect(2) = 1e-11
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = -2

Query: 465 IFTCDFQEKNNMHPKTRKILYSLRLRKIFSGVFVKANDRIMQILQKVEPY 316
           +F    Q KN+MHPKTRKILY LRLRKIF GV VKAN+ I+++LQKVEPY
Sbjct: 88  LFVIRIQGKNDMHPKTRKILYFLRLRKIFDGVLVKANEGILEMLQKVEPY 137



 Score = 20.8 bits (42), Expect(2) = 1e-11
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 560 KFLFIIRIQG 531
           K LF+IRIQG
Sbjct: 86  KLLFVIRIQG 95


>gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [Solanum tuberosum]
          Length = 246

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -2

Query: 465 IFTCDFQEKNNMHPKTRKILYSLRLRKIFSGVFVKANDRIMQILQKVEPY 316
           +F      K++MHP+TRK LYSLRLRKIFSGVFVKAN+R ++ILQKVEP+
Sbjct: 88  LFVIRIGGKSDMHPRTRKALYSLRLRKIFSGVFVKANERTVEILQKVEPF 137


>ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
           gi|449530031|ref|XP_004172000.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
           gi|449532976|ref|XP_004173453.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
          Length = 249

 Score = 67.0 bits (162), Expect(2) = 5e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -2

Query: 465 IFTCDFQEKNNMHPKTRKILYSLRLRKIFSGVFVKANDRIMQILQKVEPY 316
           IF    Q KN+MHPKTRKILYSL L +IFS VF KAN+ I+  LQ+VEPY
Sbjct: 90  IFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVEPY 139



 Score = 22.3 bits (46), Expect(2) = 5e-10
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 566 TEKFLFIIRIQG 531
           T K +FIIRIQG
Sbjct: 86  TSKLIFIIRIQG 97


>ref|XP_004148381.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
          Length = 183

 Score = 67.0 bits (162), Expect(2) = 5e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -2

Query: 465 IFTCDFQEKNNMHPKTRKILYSLRLRKIFSGVFVKANDRIMQILQKVEPY 316
           IF    Q KN+MHPKTRKILYSL L +IFS VF KAN+ I+  LQ+VEPY
Sbjct: 90  IFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVEPY 139



 Score = 22.3 bits (46), Expect(2) = 5e-10
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 566 TEKFLFIIRIQG 531
           T K +FIIRIQG
Sbjct: 86  TSKLIFIIRIQG 97


>ref|XP_004163768.1| PREDICTED: 60S ribosomal protein L7-1-like, partial [Cucumis
           sativus]
          Length = 177

 Score = 67.0 bits (162), Expect(2) = 5e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -2

Query: 465 IFTCDFQEKNNMHPKTRKILYSLRLRKIFSGVFVKANDRIMQILQKVEPY 316
           IF    Q KN+MHPKTRKILYSL L +IFS VF KAN+ I+  LQ+VEPY
Sbjct: 90  IFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVEPY 139



 Score = 22.3 bits (46), Expect(2) = 5e-10
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 566 TEKFLFIIRIQG 531
           T K +FIIRIQG
Sbjct: 86  TSKLIFIIRIQG 97


Top