BLASTX nr result

ID: Panax21_contig00010815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010815
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   215   5e-54
ref|XP_002531036.1| conserved hypothetical protein [Ricinus comm...   196   3e-48
emb|CBI17843.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   190   2e-46
ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   187   8e-46

>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera]
          Length = 738

 Score =  215 bits (547), Expect = 5e-54
 Identities = 105/142 (73%), Positives = 123/142 (86%), Gaps = 3/142 (2%)
 Frame = -2

Query: 568  EKFKDGLIRSTRPKLNKY-LNNGSGKGEDPQDGSSVKKRNAERQGEKCTENG--DKDFGY 398
            E FKDGL R+ RPK +   L++GSGKG++PQ GSS KKR+AERQ E+C  NG  D+DF Y
Sbjct: 597  EIFKDGLGRNGRPKPSTMDLDDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEY 656

Query: 397  YVKVIRWLECDGHIETSFRQKFLTWYNLRATPEEVRVVKVFVDTLIEDPSSLAGQLVDTF 218
            YVKVIRWLEC+GH+E +FRQKFLTWY+LRATP+EVR+VKVFVDTLIEDP+SLA QL+DTF
Sbjct: 657  YVKVIRWLECEGHVEKNFRQKFLTWYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTF 716

Query: 217  SEVISSKRSSVVPTGFCLKLWH 152
            SE ISSKRSSVVP GFC+KLWH
Sbjct: 717  SETISSKRSSVVPAGFCMKLWH 738


>ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis]
           gi|223529389|gb|EEF31353.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score =  196 bits (497), Expect = 3e-48
 Identities = 98/140 (70%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
 Frame = -2

Query: 568 EKFKDGLIRSTRPKL-NKYLNNGSGKGEDPQDGSSVKKRNAERQGEKCTENGDKDFGYYV 392
           +  KDG  R  R K  NK L NG+GKGE+PQD S+ KKR+ ER+ E+CT + D+DF YYV
Sbjct: 572 DMIKDGQGRHGRSKSSNKDLLNGTGKGEEPQDASTSKKRSGERRDEECTHS-DRDFEYYV 630

Query: 391 KVIRWLECDGHIETSFRQKFLTWYNLRATPEEVRVVKVFVDTLIEDPSSLAGQLVDTFSE 212
           KVIR LEC+GHIE +FRQKFLTWY+LRATP+EVRVVK FVDT I+DP+SLA QLVDTFSE
Sbjct: 631 KVIRLLECEGHIEKNFRQKFLTWYSLRATPQEVRVVKAFVDTFIQDPASLAEQLVDTFSE 690

Query: 211 VISSKRSSVVPTGFCLKLWH 152
            ISS+RSSVVP GFC+KLWH
Sbjct: 691 CISSRRSSVVPAGFCMKLWH 710


>emb|CBI17843.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  192 bits (488), Expect = 3e-47
 Identities = 90/117 (76%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
 Frame = -2

Query: 496 KGEDPQDGSSVKKRNAERQGEKCTENG--DKDFGYYVKVIRWLECDGHIETSFRQKFLTW 323
           K ++PQ GSS KKR+AERQ E+C  NG  D+DF YYVKVIRWLEC+GH+E +FRQKFLTW
Sbjct: 536 KDDEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKVIRWLECEGHVEKNFRQKFLTW 595

Query: 322 YNLRATPEEVRVVKVFVDTLIEDPSSLAGQLVDTFSEVISSKRSSVVPTGFCLKLWH 152
           Y+LRATP+EVR+VKVFVDTLIEDP+SLA QL+DTFSE ISSKRSSVVP GFC+KLWH
Sbjct: 596 YSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTFSETISSKRSSVVPAGFCMKLWH 652


>ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 736

 Score =  190 bits (482), Expect = 2e-46
 Identities = 94/142 (66%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
 Frame = -2

Query: 568  EKFKDGLIRSTRPKLN-KYLNNGSGKGEDPQDGSSVKKRNAERQGEKCTENG--DKDFGY 398
            E  KDG  ++ R K + K   N SGK E PQDGS+ KKR+ ERQ E    NG  D+DF Y
Sbjct: 595  ETLKDGPGKNKRSKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEY 654

Query: 397  YVKVIRWLECDGHIETSFRQKFLTWYNLRATPEEVRVVKVFVDTLIEDPSSLAGQLVDTF 218
            YVKVIRWLEC+GHIE +FRQKFLTWY+LRATP+EVR+VK+++DT +EDP+SLA QLVDTF
Sbjct: 655  YVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTF 714

Query: 217  SEVISSKRSSVVPTGFCLKLWH 152
            SE +SSKR+SVVP GFC+KLWH
Sbjct: 715  SECLSSKRTSVVPAGFCMKLWH 736


>ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]
          Length = 737

 Score =  187 bits (476), Expect = 8e-46
 Identities = 94/142 (66%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
 Frame = -2

Query: 568  EKFKDGLIRSTRPKLN-KYLNNGSGKGEDPQDGSSVKKRNAERQGEKCTENG--DKDFGY 398
            E  KDG  ++ R K + K   N SGK E PQDGS+ KKR+ ERQ E    NG  D+DF Y
Sbjct: 596  ETLKDGPGKNKRSKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEY 655

Query: 397  YVKVIRWLECDGHIETSFRQKFLTWYNLRATPEEVRVVKVFVDTLIEDPSSLAGQLVDTF 218
            YVKVIRWLEC+GHIE +FRQKFLTWY+LRAT +EVR+VK+++DT +EDP+SLA QLVDTF
Sbjct: 656  YVKVIRWLECEGHIEKNFRQKFLTWYSLRATSQEVRIVKIYIDTFLEDPASLAEQLVDTF 715

Query: 217  SEVISSKRSSVVPTGFCLKLWH 152
            SE ISSKR+SVVP GFC+KLWH
Sbjct: 716  SECISSKRTSVVPAGFCMKLWH 737


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