BLASTX nr result
ID: Panax21_contig00010758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00010758
(1700 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot... 810 0.0
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot... 810 0.0
ref|XP_002305447.1| chromatin remodeling complex subunit [Populu... 780 0.0
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl... 777 0.0
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated... 776 0.0
>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 944
Score = 810 bits (2091), Expect = 0.0
Identities = 407/572 (71%), Positives = 471/572 (82%), Gaps = 6/572 (1%)
Frame = -1
Query: 1700 KDDLGYVCRICGVIQRGIESIIEFQFAKRTSTRTYKYEAQTTKDEEATEILHGGTRFSGH 1521
KDD+G VCRICGV+ + IE+IIE+Q++K +RTY YE + TKD E T+ G RFS H
Sbjct: 322 KDDIGSVCRICGVVNKSIETIIEYQYSKVKRSRTYMYEPRNTKDREPTDDPSDGLRFSEH 381
Query: 1520 NFLVAELAAHPRHSKIMKSHQVEGFNFLVSNLVTDNPGGCILAHAPGSGKTFMVISFIQS 1341
+ +V E+ AHPRHS MK HQVEGFNFLVSNLV DNPGGCILAHAPGSGKTFM+ISF+QS
Sbjct: 382 SLIVTEIHAHPRHSMQMKPHQVEGFNFLVSNLVADNPGGCILAHAPGSGKTFMIISFMQS 441
Query: 1340 FMAKYPFARPLVILPRGILPTWKKEFLLWQVEDIPLLDFYSVKADSRSQQLEVLKQWAGE 1161
F+AKYP ARPLV+LP+GIL TWKKEFL WQVEDIPL DFYSVKADSR QQLEVLKQW E
Sbjct: 442 FLAKYPQARPLVVLPKGILATWKKEFLTWQVEDIPLYDFYSVKADSRPQQLEVLKQWVAE 501
Query: 1160 RSILFLGYKQFSSIVCDNDTSKTSAACQEILLTHPSLLILDEGHTPRNENTDQLAALEKV 981
+SILFLGYKQFSSIVC + SK + ACQEILL P +LILDEGHTPRNENTD L +L KV
Sbjct: 502 KSILFLGYKQFSSIVCGDGASKAAMACQEILLKAPQILILDEGHTPRNENTDVLYSLAKV 561
Query: 980 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLESCKAIKRRILSRVTSSKKGNMLK-K 804
QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL+LES +AI +RI+S+V LK
Sbjct: 562 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAIVKRIMSKVDIMGVRKQLKSN 621
Query: 803 GDNEFYELVEESLLRDNDLKRRAVVIQDLREMTSKVLHYYKGDFLDELPGLIDFTLFLNL 624
+ FY+LVE +L +D++ +R+ VIQDLREMTSKVLHYYKGDFLDELPGL+DFT+ LNL
Sbjct: 622 AADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNL 681
Query: 623 SPRQKREVKELKKLGGKFKISSDGSAIYVHPQLKYLTKNTAVKD-RTD----QVKIDEML 459
S RQK+EV L K KFK +S GSA+Y+HPQLKY + A + +TD Q K+DE+L
Sbjct: 682 SARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTYQKKMDEIL 741
Query: 458 EKLDEREGVKAMFYLNLLRLCESSGEKLLVFSQYLLPMKFLERLTVKVKGWSPGKEIFMI 279
E+LD REGVK F+LN+L LC+S+GEKLLVFSQYLLP++FLE+LT+KV GWS GKEIF+I
Sbjct: 742 EQLDVREGVKVKFFLNVLALCQSAGEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKEIFVI 801
Query: 278 TGDSDSEARESHMECFNNSPDARVFFGSIKACSEGISLVGASRIIILDVHLNPSVTRQAI 99
+G+S SE RE ME FN SPDARVFFGSIKAC EGISLVGASR++ILDVHLNPSVTRQAI
Sbjct: 802 SGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAI 861
Query: 98 GRAFRPGQVKKVFTYRLVASGSPEEEDHSTCF 3
GRAFRPGQ KKV Y+LVA+ SPEEEDH+TCF
Sbjct: 862 GRAFRPGQKKKVHVYKLVAADSPEEEDHNTCF 893
>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 903
Score = 810 bits (2091), Expect = 0.0
Identities = 407/572 (71%), Positives = 470/572 (82%), Gaps = 6/572 (1%)
Frame = -1
Query: 1700 KDDLGYVCRICGVIQRGIESIIEFQFAKRTSTRTYKYEAQTTKDEEATEILHGGTRFSGH 1521
KDD+G VCRICGV+ + IE+IIE+Q+ K +RTY YE + TKD E T+ G FS H
Sbjct: 281 KDDIGSVCRICGVVNKSIETIIEYQYTKVKRSRTYMYEPRNTKDREPTDDPSDGLGFSEH 340
Query: 1520 NFLVAELAAHPRHSKIMKSHQVEGFNFLVSNLVTDNPGGCILAHAPGSGKTFMVISFIQS 1341
N V E+ AHPRHS MK HQVEGFNFLVSNLV +NPGGCILAHAPGSGKTFM+ISF+QS
Sbjct: 341 NLTVTEIHAHPRHSMQMKPHQVEGFNFLVSNLVAENPGGCILAHAPGSGKTFMIISFMQS 400
Query: 1340 FMAKYPFARPLVILPRGILPTWKKEFLLWQVEDIPLLDFYSVKADSRSQQLEVLKQWAGE 1161
F+AKYP ARPLV+LP+GIL TWKKEFL WQVEDIPL DFYSVKADSR QQLEVLKQW E
Sbjct: 401 FLAKYPQARPLVVLPKGILATWKKEFLTWQVEDIPLYDFYSVKADSRPQQLEVLKQWVAE 460
Query: 1160 RSILFLGYKQFSSIVCDNDTSKTSAACQEILLTHPSLLILDEGHTPRNENTDQLAALEKV 981
+SILFLGYKQFSSIVC + SK + ACQEILL P +LILDEGHTPRNENTD L +L KV
Sbjct: 461 KSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDVLYSLAKV 520
Query: 980 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLESCKAIKRRILSRVTSSKKGNMLK-K 804
QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL+LES +A+ +RI+S+V LK
Sbjct: 521 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQLKSN 580
Query: 803 GDNEFYELVEESLLRDNDLKRRAVVIQDLREMTSKVLHYYKGDFLDELPGLIDFTLFLNL 624
+ FY+LVE +L +D++ +R+ VIQDLREMTSKVLHYYKGDFLDELPGL+DFT+ LNL
Sbjct: 581 AADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNL 640
Query: 623 SPRQKREVKELKKLGGKFKISSDGSAIYVHPQLKYLTKNTAVKD-RTD----QVKIDEML 459
S RQK+EV L K KFK +S GSA+Y+HPQLKY + A + +TD Q K+DE+L
Sbjct: 641 SARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEIL 700
Query: 458 EKLDEREGVKAMFYLNLLRLCESSGEKLLVFSQYLLPMKFLERLTVKVKGWSPGKEIFMI 279
E+LD R+GVKA F+LN+L LC+SSGEKLLVFSQYLLP++FLE+LT+KVKGWSPGKEIF I
Sbjct: 701 EQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAI 760
Query: 278 TGDSDSEARESHMECFNNSPDARVFFGSIKACSEGISLVGASRIIILDVHLNPSVTRQAI 99
+G+S SE RE ME FN SPDARVFFGSIKAC EGISLVGASR++ILDVHLNPSVTRQAI
Sbjct: 761 SGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVTRQAI 820
Query: 98 GRAFRPGQVKKVFTYRLVASGSPEEEDHSTCF 3
GRAFRPGQ KKV Y+LVA+ SPEEEDH++CF
Sbjct: 821 GRAFRPGQKKKVHVYKLVAADSPEEEDHNSCF 852
>ref|XP_002305447.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222848411|gb|EEE85958.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 630
Score = 780 bits (2014), Expect = 0.0
Identities = 390/567 (68%), Positives = 460/567 (81%), Gaps = 1/567 (0%)
Frame = -1
Query: 1700 KDDLGYVCRICGVIQRGIESIIEFQFAKRTSTRTYKYEAQTTKDEEATEILHGGTRFSGH 1521
KDD+GYVCRICGVI+R I +IIE QF K +TRTY E++ KD ++ + G
Sbjct: 19 KDDIGYVCRICGVIERAIYTIIEIQFNKVMNTRTYISESRNAKDRDSNGTV--GADLFEE 76
Query: 1520 NFLVAELAAHPRHSKIMKSHQVEGFNFLVSNLVTDNPGGCILAHAPGSGKTFMVISFIQS 1341
+ +V ++ AHPRH K MK HQVEGFNFL +NLV DNPGGCILAHAPGSGKTFM+ISF+QS
Sbjct: 77 DLMVTDIPAHPRHMKQMKPHQVEGFNFLRNNLVADNPGGCILAHAPGSGKTFMIISFMQS 136
Query: 1340 FMAKYPFARPLVILPRGILPTWKKEFLLWQVEDIPLLDFYSVKADSRSQQLEVLKQWAGE 1161
F+AKYP A+ LV+LP+GILPTWK+EF +WQ+EDIPL DFYSVKADSR QQLEVL QW +
Sbjct: 137 FLAKYPHAKSLVVLPKGILPTWKREFQIWQIEDIPLYDFYSVKADSRQQQLEVLNQWVEQ 196
Query: 1160 RSILFLGYKQFSSIVCDNDTSKTSAACQEILLTHPSLLILDEGHTPRNENTDQLAALEKV 981
+SILFLGYKQFSSIVCD+ ++ S CQEILL PS+LILDE HTPRNENTD L +L KV
Sbjct: 197 KSILFLGYKQFSSIVCDDGKNQVSVTCQEILLRRPSILILDESHTPRNENTDVLQSLAKV 256
Query: 980 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLESCKAIKRRILSRVTSSKKGNMLKKG 801
QTPRKVVLSGTLYQNH KEVFN+LNLVRPKFLR+++ +AI +RILS+V K G
Sbjct: 257 QTPRKVVLSGTLYQNHAKEVFNVLNLVRPKFLRMDTSRAIVKRILSKVNIPGARKQFKAG 316
Query: 800 -DNEFYELVEESLLRDNDLKRRAVVIQDLREMTSKVLHYYKGDFLDELPGLIDFTLFLNL 624
D FY+LVE+++ +D D KR+ VI+DL EMTSKVLHYYKGDFLDELPGL+DFTL LNL
Sbjct: 317 ADAAFYDLVEQTIQKDQDFKRKVTVIRDLHEMTSKVLHYYKGDFLDELPGLVDFTLMLNL 376
Query: 623 SPRQKREVKELKKLGGKFKISSDGSAIYVHPQLKYLTKNTAVKDRTDQVKIDEMLEKLDE 444
S RQK EVK+LKKL KFK SS GSA+Y+HP+L +KN+A+ D +D++LE +D
Sbjct: 377 SSRQKHEVKKLKKLAMKFKRSSVGSAVYLHPKLNSFSKNSAITDD----MMDDLLETVDV 432
Query: 443 REGVKAMFYLNLLRLCESSGEKLLVFSQYLLPMKFLERLTVKVKGWSPGKEIFMITGDSD 264
R+GVKA F+LN+L LCES+GEKLLVFSQYL P+KFLERL +KVKGW GKEIF+I+G+S
Sbjct: 433 RDGVKAKFFLNILSLCESAGEKLLVFSQYLTPLKFLERLVMKVKGWILGKEIFVISGESS 492
Query: 263 SEARESHMECFNNSPDARVFFGSIKACSEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 84
S+ RE ME FNNS DA+VFFGSIKAC EGISLVGASRIIILDVHLNPSVT QAIGRAFR
Sbjct: 493 SDHREWSMERFNNSMDAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTCQAIGRAFR 552
Query: 83 PGQVKKVFTYRLVASGSPEEEDHSTCF 3
PGQ KKV+ YRLVA+ SPEEEDH+TCF
Sbjct: 553 PGQTKKVYAYRLVAADSPEEEDHTTCF 579
>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
Length = 883
Score = 777 bits (2007), Expect = 0.0
Identities = 393/567 (69%), Positives = 461/567 (81%), Gaps = 1/567 (0%)
Frame = -1
Query: 1700 KDDLGYVCRICGVIQRGIESIIEFQFAKRTSTRTYKYEAQTTKDEEATEILHGGTRFSGH 1521
KDDLGYVCR+CGVI R IE+I EFQ+ + STRTY ++ +K + G +
Sbjct: 279 KDDLGYVCRVCGVIDRKIETIFEFQYKVKRSTRTYASDSWNSKGKADVF----GINVAED 334
Query: 1520 NFLVAELAAHPRHSKIMKSHQVEGFNFLVSNLVTDNPGGCILAHAPGSGKTFMVISFIQS 1341
+ +V ++AAHPRH K MK HQVEGFNFLV NL D+PGGCILAHAPGSGKTFM+ISF+QS
Sbjct: 335 DLVVTDIAAHPRHMKQMKPHQVEGFNFLVRNLAGDHPGGCILAHAPGSGKTFMIISFMQS 394
Query: 1340 FMAKYPFARPLVILPRGILPTWKKEFLLWQVEDIPLLDFYSVKADSRSQQLEVLKQWAGE 1161
F+ KYP ARPLV+LP+GIL TWKKEF WQVEDIPL D Y+VKADSRSQQLEVLKQW +
Sbjct: 395 FLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDLYTVKADSRSQQLEVLKQWMEQ 454
Query: 1160 RSILFLGYKQFSSIVCDNDTSKTSAACQEILLTHPSLLILDEGHTPRNENTDQLAALEKV 981
+SILFLGYKQFSSIVCDN T+ TS +CQEILL P++LILDEGH PRNENTD + +L KV
Sbjct: 455 KSILFLGYKQFSSIVCDNGTNNTSLSCQEILLKIPTILILDEGHNPRNENTDMVQSLAKV 514
Query: 980 QTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLESCKAIKRRILSRVTSSKKGNMLKKG 801
QT RKVVLSGTLYQNHV+EVFNILNLVRPKFL++E+ + I RRI SRV G
Sbjct: 515 QTARKVVLSGTLYQNHVREVFNILNLVRPKFLKMETSRPIVRRIHSRVHI--------PG 566
Query: 800 DNEFYELVEESLLRDNDLKRRAVVIQDLREMTSKVLHYYKGDFLDELPGLIDFTLFLNLS 621
FY+LVE +L +D D KR+ VIQDLREMTSKVLHYYKGDFLDELPGL+DFT+ L LS
Sbjct: 567 VRSFYDLVENTLQKDTDFKRKIAVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLTLS 626
Query: 620 PRQKREVKELKKLG-GKFKISSDGSAIYVHPQLKYLTKNTAVKDRTDQVKIDEMLEKLDE 444
PRQK E+++LKKL KFKI+S GSA+Y+HP+LK L +N +D + +D+++EKLD
Sbjct: 627 PRQKPEIQKLKKLSRRKFKINSVGSAVYLHPKLKPLAENCGENSTSDNI-MDDLIEKLDM 685
Query: 443 REGVKAMFYLNLLRLCESSGEKLLVFSQYLLPMKFLERLTVKVKGWSPGKEIFMITGDSD 264
R+GVK+ FY N+L LCES+GEKLLVFSQYLLP+K+LERLT+K KGWS G+EIF+I+G+S
Sbjct: 686 RDGVKSKFYYNMLNLCESAGEKLLVFSQYLLPLKYLERLTMKWKGWSLGREIFVISGESS 745
Query: 263 SEARESHMECFNNSPDARVFFGSIKACSEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 84
SE RE ME FNNSPDARVFFGSIKAC EGISLVGASRIIILDVHLNPSVTRQAIGRAFR
Sbjct: 746 SEQREWSMEKFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFR 805
Query: 83 PGQVKKVFTYRLVASGSPEEEDHSTCF 3
PGQ+KKVF YRLV++ SPEEEDH+TCF
Sbjct: 806 PGQMKKVFVYRLVSADSPEEEDHNTCF 832
>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1B-like [Cucumis sativus]
Length = 903
Score = 776 bits (2005), Expect = 0.0
Identities = 391/568 (68%), Positives = 461/568 (81%), Gaps = 2/568 (0%)
Frame = -1
Query: 1700 KDDLGYVCRICGVIQRGIESIIEFQFAK-RTSTRTYKYEAQTTKDEEATEILHGGTRFSG 1524
KDDLGYVCRICGVI RGIE+I EFQ+ K + STRTY E+ +++++ I+ G + S
Sbjct: 294 KDDLGYVCRICGVIDRGIETIFEFQYNKGKKSTRTYISES---RNKDSGNIV--GVKISE 348
Query: 1523 HNFLVAELAAHPRHSKIMKSHQVEGFNFLVSNLVTDNPGGCILAHAPGSGKTFMVISFIQ 1344
+ V E++AHPRH K MK HQ+EGFNFL+SNLV+DNPGGCILAHAPGSGKTFM+ISF+Q
Sbjct: 349 DDLTVTEISAHPRHMKQMKPHQIEGFNFLISNLVSDNPGGCILAHAPGSGKTFMIISFMQ 408
Query: 1343 SFMAKYPFARPLVILPRGILPTWKKEFLLWQVEDIPLLDFYSVKADSRSQQLEVLKQWAG 1164
SF+AKYP ARPLV+LP+GIL TWKKEF +WQVEDIPL DFYSVKAD+R+QQL VL QW
Sbjct: 409 SFLAKYPQARPLVVLPKGILATWKKEFQIWQVEDIPLYDFYSVKADNRAQQLTVLNQWVE 468
Query: 1163 ERSILFLGYKQFSSIVCDNDTSKTSAACQEILLTHPSLLILDEGHTPRNENTDQLAALEK 984
+SILFLGYKQFS+IVCD +TS S ACQ ILL P++LILDEGHTPRNENTD L L K
Sbjct: 469 HKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQTLAK 528
Query: 983 VQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLRLESCKAIKRRILSRVTSSKKGNMLKK 804
V+TPRKVVLSGTLYQNHVKEVFNI+NLVRPKF+R E+ + I +RI+SRV K
Sbjct: 529 VRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGARKQFKA 588
Query: 803 G-DNEFYELVEESLLRDNDLKRRAVVIQDLREMTSKVLHYYKGDFLDELPGLIDFTLFLN 627
G D FY+LVE +L +D D +R+ VI DLREMTSK+LHYYKGDFLDELPGL+DFT+ LN
Sbjct: 589 GVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTVVLN 648
Query: 626 LSPRQKREVKELKKLGGKFKISSDGSAIYVHPQLKYLTKNTAVKDRTDQVKIDEMLEKLD 447
L+ +QK E +++KK KFKISS GSA+Y+HP+L + N AV D KIDE+++K+D
Sbjct: 649 LTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTDD----KIDEVIDKMD 704
Query: 446 EREGVKAMFYLNLLRLCESSGEKLLVFSQYLLPMKFLERLTVKVKGWSPGKEIFMITGDS 267
++GVK F+LNLL LC ++GEKLLVFSQYLLP+KF+ERL V+ KGWSPG+E FMI+G++
Sbjct: 705 VKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETFMISGET 764
Query: 266 DSEARESHMECFNNSPDARVFFGSIKACSEGISLVGASRIIILDVHLNPSVTRQAIGRAF 87
E RE ME FNNSPDARVFFGSIKAC EGISLVGASRIIILDVHLNPSVTRQAIGRAF
Sbjct: 765 TPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAF 824
Query: 86 RPGQVKKVFTYRLVASGSPEEEDHSTCF 3
RPGQ KKVF YRLVA SPEE DHSTCF
Sbjct: 825 RPGQTKKVFAYRLVAGDSPEEGDHSTCF 852