BLASTX nr result

ID: Panax21_contig00010714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010714
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...   154   2e-35
ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|2...   152   8e-35
ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleop...   150   4e-34
ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop...   149   7e-34
ref|XP_002302667.1| predicted protein [Populus trichocarpa] gi|2...   149   7e-34

>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
           max]
          Length = 483

 Score =  154 bits (389), Expect = 2e-35
 Identities = 73/115 (63%), Positives = 86/115 (74%)
 Frame = +3

Query: 288 EKYEVNGQLLEVVLARPQSDKKSDGASPHNSGPHPNYIPNPGYSGFXXXXXXXXXXXXXX 467
           EKYE++GQ+LEVVLA+PQ+DKK DG   +N G HPN++P+P Y  F              
Sbjct: 342 EKYEIDGQMLEVVLAKPQADKKPDGGYAYNPGLHPNHVPHPAYGNFSGNPYGSLGAGYGV 401

Query: 468 XXXXFQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPPMRPRRNDWTN 632
               +QQPMIYGRGPMPAGMQMVPM+LPDGRIGYVLQQPGVQ+PP RPRRND +N
Sbjct: 402 AAG-YQQPMIYGRGPMPAGMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRNDRSN 455



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = +2

Query: 2   PDHSASSQVKALYVKNIPENTLSEQLKELFQRHGEVTKVVMPPAKSG 142
           PDHSASSQVKALYVKNIPEN  +EQLKELF+RHGEVTKVVMPP K+G
Sbjct: 272 PDHSASSQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKAG 318


>ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|222861667|gb|EEE99209.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  152 bits (384), Expect = 8e-35
 Identities = 76/116 (65%), Positives = 85/116 (73%)
 Frame = +3

Query: 285 AEKYEVNGQLLEVVLARPQSDKKSDGASPHNSGPHPNYIPNPGYSGFXXXXXXXXXXXXX 464
           AEKYE++GQ+LEVVLA+PQ+DKK D A P+N+G HPN +P P YSGF             
Sbjct: 342 AEKYEIDGQVLEVVLAKPQADKKPDAAYPYNAGVHPNPVPLPAYSGFAGNPYGSLGTGFG 401

Query: 465 XXXXXFQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPPMRPRRNDWTN 632
                FQQP+IYGRGPMPAGM MVPMVLPDGRIGYVLQQPGVQMP  RPRR D  N
Sbjct: 402 VASS-FQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVDRNN 456



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 41/48 (85%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
 Frame = +2

Query: 2   PDHSA-SSQVKALYVKNIPENTLSEQLKELFQRHGEVTKVVMPPAKSG 142
           PDHSA SSQVKALYVKNIPENT +EQLK LFQRHG+VTKVVMPP K+G
Sbjct: 273 PDHSAASSQVKALYVKNIPENTSTEQLKGLFQRHGDVTKVVMPPGKAG 320


>ref|XP_002264834.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis
           vinifera] gi|296088998|emb|CBI38701.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  150 bits (378), Expect = 4e-34
 Identities = 73/115 (63%), Positives = 87/115 (75%)
 Frame = +3

Query: 288 EKYEVNGQLLEVVLARPQSDKKSDGASPHNSGPHPNYIPNPGYSGFXXXXXXXXXXXXXX 467
           EK+E++GQ L+V LA+PQSDKK +G  P++SG HPN++P+PGY GF              
Sbjct: 338 EKHEIDGQALDVSLAKPQSDKKFEGVHPYSSG-HPNFLPHPGYGGFGGNPYGSLGPGYGV 396

Query: 468 XXXXFQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPPMRPRRNDWTN 632
               FQQP+IYGRGPMPAGM MVPMVLPDGRIGYVLQQPGVQMPP RPRRN+ +N
Sbjct: 397 SAP-FQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPPPRPRRNERSN 450



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 5   DHSASSQVKALYVKNIPENTLSEQLKELFQRHGEVTKVVMPPAKSG 142
           DHSA++QVKALYVKNIPENT +EQLKELFQRHGEVTKVVMPPAKSG
Sbjct: 268 DHSAAAQVKALYVKNIPENTTTEQLKELFQRHGEVTKVVMPPAKSG 313


>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
           max]
          Length = 483

 Score =  149 bits (376), Expect = 7e-34
 Identities = 73/115 (63%), Positives = 84/115 (73%)
 Frame = +3

Query: 288 EKYEVNGQLLEVVLARPQSDKKSDGASPHNSGPHPNYIPNPGYSGFXXXXXXXXXXXXXX 467
           EKYE++GQ+LEVVLA+PQ+DKK DG   +N G HPN+IP+P Y  F              
Sbjct: 342 EKYEIDGQMLEVVLAKPQADKKPDGGYAYNPGLHPNHIPHPAYGNFSGNPYGSLGAGYGV 401

Query: 468 XXXXFQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPPMRPRRNDWTN 632
               +QQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQ+P  RPRR D +N
Sbjct: 402 AAG-YQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRIDRSN 455



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = +2

Query: 2   PDHSASSQVKALYVKNIPENTLSEQLKELFQRHGEVTKVVMPPAKSG 142
           PDHSASSQVKALYVKNIPEN  +EQLKELF+RHGEVTKVVMPP K+G
Sbjct: 272 PDHSASSQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKAG 318


>ref|XP_002302667.1| predicted protein [Populus trichocarpa] gi|222844393|gb|EEE81940.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  149 bits (376), Expect = 7e-34
 Identities = 74/115 (64%), Positives = 86/115 (74%)
 Frame = +3

Query: 288 EKYEVNGQLLEVVLARPQSDKKSDGASPHNSGPHPNYIPNPGYSGFXXXXXXXXXXXXXX 467
           EKYE++GQLLEVVLA+PQ+DKK DG+ P+N+G +PN +P P YSGF              
Sbjct: 257 EKYEIDGQLLEVVLAKPQADKKPDGSYPYNAGVNPNPVPLPAYSGFAGNPHGSLGTGFGV 316

Query: 468 XXXXFQQPMIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGVQMPPMRPRRNDWTN 632
               FQQP+IYGRGPMPAGM MVPMVLPDGRIGYVLQQPGVQMP  +PRR D +N
Sbjct: 317 AAG-FQQPVIYGRGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPQPRRVDRSN 370


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