BLASTX nr result

ID: Panax21_contig00010709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010709
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...   247   2e-63
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]   244   1e-62
ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containin...   238   8e-61
ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containin...   229   5e-58
gb|ACU23866.1| unknown [Glycine max]                                  228   1e-57

>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score =  247 bits (631), Expect = 2e-63
 Identities = 137/226 (60%), Positives = 156/226 (69%), Gaps = 22/226 (9%)
 Frame = -3

Query: 758 LHPARYRTQPCKDGQNCRRRVCFFAHTPDQIRVL---SPRAVGAGDSYDGSPRRLCFEGS 588
           LHPARYRTQPCKDG NCRRRVCFFAHT +Q+RVL   SPR  G+ +SYDGSP R   E S
Sbjct: 169 LHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEAS 228

Query: 587 CS------------------PTESPPLTPMANXXXXXXXXXSVCEMVASLRQLQLNKVKS 462
           C+                  P ESPP++P+ +         S+ EMVASLRQLQL+KVKS
Sbjct: 229 CAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLSKVKS 288

Query: 461 MPTSWALQMGS-SGFGSPRSIMTRHGFCSLPSTPTRTVCRPGTGFMDHWDKTGPEEELVM 285
            P+SW + MGS  GFGSPR+ + R GFCSLPSTPTR   R G GF+D +     EEE  M
Sbjct: 289 APSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDLF-----EEEPAM 343

Query: 284 ERVESGRDLRAKMFEKLSKENPLDRVDPNFSDAPNPDVGWVSELIK 147
           ERVESGRDLRAKMFEKLSKEN LDR DP+ S A  PDVGWVSEL+K
Sbjct: 344 ERVESGRDLRAKMFEKLSKENSLDRPDPSASGA-GPDVGWVSELVK 388


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score =  244 bits (623), Expect = 1e-62
 Identities = 136/224 (60%), Positives = 154/224 (68%), Gaps = 22/224 (9%)
 Frame = -3

Query: 758 LHPARYRTQPCKDGQNCRRRVCFFAHTPDQIRVL---SPRAVGAGDSYDGSPRRLCFEGS 588
           LHPARYRTQPCKDG NCRRRVCFFAHT +Q+RVL   SPR  G+ +SYDGSP R   E S
Sbjct: 209 LHPARYRTQPCKDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEAS 268

Query: 587 CS------------------PTESPPLTPMANXXXXXXXXXSVCEMVASLRQLQLNKVKS 462
           C+                  P ESPP++P+ +         S+ EMVASLRQLQL+KVKS
Sbjct: 269 CAKTLPFMSSPGSVSPPGSPPPESPPMSPITSSLSRSLGSNSINEMVASLRQLQLSKVKS 328

Query: 461 MPTSWALQMGS-SGFGSPRSIMTRHGFCSLPSTPTRTVCRPGTGFMDHWDKTGPEEELVM 285
            P+SW + MGS  GFGSPR+ + R GFCSLPSTPTR   R G GF+D +     EEE  M
Sbjct: 329 APSSWCVHMGSPGGFGSPRASIIRPGFCSLPSTPTRAPKRHGLGFVDLF-----EEEPAM 383

Query: 284 ERVESGRDLRAKMFEKLSKENPLDRVDPNFSDAPNPDVGWVSEL 153
           ERVESGRDLRAKMFEKLSKEN LDR DP+ S A  PDVGWVSEL
Sbjct: 384 ERVESGRDLRAKMFEKLSKENSLDRPDPSASGA-GPDVGWVSEL 426


>ref|XP_003525299.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 353

 Score =  238 bits (608), Expect = 8e-61
 Identities = 129/217 (59%), Positives = 147/217 (67%), Gaps = 14/217 (6%)
 Frame = -3

Query: 758 LHPARYRTQPCKDGQNCRRRVCFFAHTPDQIRVLSPRAVGAGDSYDGSPRRLCFEGSC-- 585
           LHPARYRTQPCKDG +CRRRVCFFAHTPDQ+RVL  ++  + DSYDGSP R   E SC  
Sbjct: 145 LHPARYRTQPCKDGTSCRRRVCFFAHTPDQLRVLPQQSPRSADSYDGSPLRHAIESSCAK 204

Query: 584 ------------SPTESPPLTPMANXXXXXXXXXSVCEMVASLRQLQLNKVKSMPTSWAL 441
                       SP ESPP++PM           SV EMVASLR LQL KVKS+P+SW +
Sbjct: 205 SHPFVASPGSASSPVESPPMSPMT---------VSVNEMVASLRNLQLGKVKSLPSSWNV 255

Query: 440 QMGSSGFGSPRSIMTRHGFCSLPSTPTRTVCRPGTGFMDHWDKTGPEEELVMERVESGRD 261
            MGSSGFGSPR  M R GF SLP+TPT+   R G  + D WD++  EEE VMERVESGR 
Sbjct: 256 -MGSSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDQWDQSCCEEEPVMERVESGRS 314

Query: 260 LRAKMFEKLSKENPLDRVDPNFSDAPNPDVGWVSELI 150
           +RA+MFEKLSKEN LD      S    PDVGWVSEL+
Sbjct: 315 IRARMFEKLSKENHLDGSGSGSSQIGVPDVGWVSELV 351


>ref|XP_003530556.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           [Glycine max]
          Length = 355

 Score =  229 bits (584), Expect = 5e-58
 Identities = 125/220 (56%), Positives = 147/220 (66%), Gaps = 17/220 (7%)
 Frame = -3

Query: 758 LHPARYRTQPCKDGQNCRRRVCFFAHTPDQIRVLSPRAVGAGDSYDGSPRRLCFEGSCS- 582
           LHPARYRTQPCKDG +CRRRVCFFAHTP+Q+RVL  ++  + DSYDGSP R   E SC+ 
Sbjct: 145 LHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSPLRHAIESSCAK 204

Query: 581 ----------------PTESPPLTPMANXXXXXXXXXSVCEMVASLRQLQLNKVKSMPTS 450
                           P ESPP++PM           SV EMVASLR LQL KVKS+P+S
Sbjct: 205 TLAPAPFVSSPGSVSPPLESPPMSPMT---------VSVNEMVASLRNLQLGKVKSLPSS 255

Query: 449 WALQMGSSGFGSPRSIMTRHGFCSLPSTPTRTVCRPGTGFMDHWDKTGPEEELVMERVES 270
           W + MG SGFGSPR  M R GF SLP+TPT+   R G  + D WD++  EEE VMERVES
Sbjct: 256 WNV-MGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQS-CEEEPVMERVES 313

Query: 269 GRDLRAKMFEKLSKENPLDRVDPNFSDAPNPDVGWVSELI 150
           GR++RA+MF KLSKEN LD  D       +PDVGWVSEL+
Sbjct: 314 GRNIRARMFAKLSKENHLDGSDSGSGQIGDPDVGWVSELV 353


>gb|ACU23866.1| unknown [Glycine max]
          Length = 355

 Score =  228 bits (581), Expect = 1e-57
 Identities = 125/220 (56%), Positives = 147/220 (66%), Gaps = 17/220 (7%)
 Frame = -3

Query: 758 LHPARYRTQPCKDGQNCRRRVCFFAHTPDQIRVLSPRAVGAGDSYDGSPRRLCFEGSCS- 582
           LHPARYRTQPCKDG +CRRRVCFFAHTP+Q+RVL  ++  + DSYDGSP R   E SC+ 
Sbjct: 145 LHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQSPRSADSYDGSPLRHAIESSCAK 204

Query: 581 ----------------PTESPPLTPMANXXXXXXXXXSVCEMVASLRQLQLNKVKSMPTS 450
                           P ESPP++PM           SV EMVASLR LQL KVKS+P+S
Sbjct: 205 TLAPAPFVSSPGSVSPPLESPPMSPMT---------VSVNEMVASLRNLQLGKVKSLPSS 255

Query: 449 WALQMGSSGFGSPRSIMTRHGFCSLPSTPTRTVCRPGTGFMDHWDKTGPEEELVMERVES 270
           W + MG SGFGSPR  M R GF SLP+TPT+   R G  + D WD++  EEE VMERVES
Sbjct: 256 WNV-MGPSGFGSPRGPMIRPGFFSLPTTPTQAPTRGGVNYFDKWDQS-CEEEPVMERVES 313

Query: 269 GRDLRAKMFEKLSKENPLDRVDPNFSDAPNPDVGWVSELI 150
           GR++RA+MF KLSKEN LD  D       +PDVGWVSEL+
Sbjct: 314 GRNIRARMFAKLSKENHLDGSDFGSGQIGDPDVGWVSELV 353


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