BLASTX nr result

ID: Panax21_contig00010697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010697
         (2120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   636   e-180
ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   636   e-180
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   608   e-171
ref|XP_002525276.1| Chitin-inducible gibberellin-responsive prot...   607   e-171
dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]             607   e-171

>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  636 bits (1641), Expect = e-180
 Identities = 315/410 (76%), Positives = 347/410 (84%)
 Frame = -2

Query: 1453 HESSSADQFSYSPAQDLTLEFGSLISGKWASDILLEAARAMAENNTTRLQQLIWMLNELS 1274
            H +    +FS+SPA+DL LEF S  SGKWAS+ILLE ARA+A+ N+ R+QQL+WMLNELS
Sbjct: 100  HHAFEPTEFSFSPARDLHLEFNSSASGKWASEILLETARAIADKNSARVQQLMWMLNELS 159

Query: 1273 SPYGDTDQKLASYFLRALFNRMTGSGQKSYRSLTSASEKTCSFESTRKTVLKFQEVSPWT 1094
            SPYGDTDQKLA+YFL+ALF+RMT SG++ YR+L SASEKTCSFESTRK VLKFQEVSPWT
Sbjct: 160  SPYGDTDQKLAAYFLQALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWT 219

Query: 1093 TFGHVACNGAIMEALEGETKLHIIDISNTYCTQWPTLLEALATHTDETPQLRLTTVVXXX 914
            TFGHVACNGAIMEALEGE+KLHIIDISNTYCTQWPTLLEALAT TDETP LRLTTVV   
Sbjct: 220  TFGHVACNGAIMEALEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSK 279

Query: 913  XXXXXXXXAQKVMREIGNRMEKFARLMGVPFKFNVVHHVGDLSELNVGELDIREEEALAI 734
                     QK+M+EIGNRMEKFARLMGVPFKFNV+HH GDLS LN+ ELDI+++EALA+
Sbjct: 280  AGTGGMAPVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAV 339

Query: 733  NCVGSLHSVQALGNRRDYLVSMFRRLQPRIVTVVEEEADLXXXXXXXXXXXXFQECLRWF 554
            NCVG+LHSV A GNRRD +VS FRRL PRI+TVVEEEADL            FQECLRWF
Sbjct: 340  NCVGALHSVTAFGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWF 399

Query: 553  RVYFESLDECFSKTSNERLILERAAGRAVVDLVACQPSESIERRETATRWSHRLHAAGFS 374
            RVY ESLDE F +TSNERL+LERAAGRA+VDLVAC PSESIERRETATRWS RLHA+GFS
Sbjct: 400  RVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFS 459

Query: 373  AVSFSDEVSDDVRALLRRYKEGWIMAPCSDAGIFLMWKDQPVVWASAWKP 224
             VSFSDEV DDVRALLRRYKEGW M   SDAGIFL WKDQPVVW SAWKP
Sbjct: 460  PVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWKP 509


>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  636 bits (1641), Expect = e-180
 Identities = 315/410 (76%), Positives = 347/410 (84%)
 Frame = -2

Query: 1453 HESSSADQFSYSPAQDLTLEFGSLISGKWASDILLEAARAMAENNTTRLQQLIWMLNELS 1274
            H +    +FS+SPA+DL LEF S  SGKWAS+ILLE ARA+A+ N+ R+QQL+WMLNELS
Sbjct: 85   HHAFEPTEFSFSPARDLHLEFNSSASGKWASEILLETARAIADKNSARVQQLMWMLNELS 144

Query: 1273 SPYGDTDQKLASYFLRALFNRMTGSGQKSYRSLTSASEKTCSFESTRKTVLKFQEVSPWT 1094
            SPYGDTDQKLA+YFL+ALF+RMT SG++ YR+L SASEKTCSFESTRK VLKFQEVSPWT
Sbjct: 145  SPYGDTDQKLAAYFLQALFSRMTDSGERCYRTLISASEKTCSFESTRKMVLKFQEVSPWT 204

Query: 1093 TFGHVACNGAIMEALEGETKLHIIDISNTYCTQWPTLLEALATHTDETPQLRLTTVVXXX 914
            TFGHVACNGAIMEALEGE+KLHIIDISNTYCTQWPTLLEALAT TDETP LRLTTVV   
Sbjct: 205  TFGHVACNGAIMEALEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTSK 264

Query: 913  XXXXXXXXAQKVMREIGNRMEKFARLMGVPFKFNVVHHVGDLSELNVGELDIREEEALAI 734
                     QK+M+EIGNRMEKFARLMGVPFKFNV+HH GDLS LN+ ELDI+++EALA+
Sbjct: 265  AGTGGMAPVQKLMKEIGNRMEKFARLMGVPFKFNVLHHSGDLSHLNLAELDIKDDEALAV 324

Query: 733  NCVGSLHSVQALGNRRDYLVSMFRRLQPRIVTVVEEEADLXXXXXXXXXXXXFQECLRWF 554
            NCVG+LHSV A GNRRD +VS FRRL PRI+TVVEEEADL            FQECLRWF
Sbjct: 325  NCVGALHSVTAFGNRRDIVVSSFRRLHPRIITVVEEEADLDVGVDGFDFVKGFQECLRWF 384

Query: 553  RVYFESLDECFSKTSNERLILERAAGRAVVDLVACQPSESIERRETATRWSHRLHAAGFS 374
            RVY ESLDE F +TSNERL+LERAAGRA+VDLVAC PSESIERRETATRWS RLHA+GFS
Sbjct: 385  RVYLESLDESFPRTSNERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFS 444

Query: 373  AVSFSDEVSDDVRALLRRYKEGWIMAPCSDAGIFLMWKDQPVVWASAWKP 224
             VSFSDEV DDVRALLRRYKEGW M   SDAGIFL WKDQPVVW SAWKP
Sbjct: 445  PVSFSDEVCDDVRALLRRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWKP 494


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  608 bits (1567), Expect = e-171
 Identities = 300/382 (78%), Positives = 329/382 (86%)
 Frame = -2

Query: 1369 WASDILLEAARAMAENNTTRLQQLIWMLNELSSPYGDTDQKLASYFLRALFNRMTGSGQK 1190
            WAS+ILLE ARA+A+ N+ R+QQL+WMLNELSSPYGDTDQKLA+YFL+ALF+RMT SG++
Sbjct: 99   WASEILLETARAIADKNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGER 158

Query: 1189 SYRSLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAIMEALEGETKLHIIDISN 1010
             YR+L SASEKTCSFESTRK VLKFQEVSPWTTFGHVACNGAIMEALEGE+KLHIIDISN
Sbjct: 159  CYRTLISASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAIMEALEGESKLHIIDISN 218

Query: 1009 TYCTQWPTLLEALATHTDETPQLRLTTVVXXXXXXXXXXXAQKVMREIGNRMEKFARLMG 830
            TYCTQWPTLLEALAT TDETP LRLTTVV            QK+M+EIGNRMEKFARLMG
Sbjct: 219  TYCTQWPTLLEALATRTDETPHLRLTTVVTSKAGTGGMAPVQKLMKEIGNRMEKFARLMG 278

Query: 829  VPFKFNVVHHVGDLSELNVGELDIREEEALAINCVGSLHSVQALGNRRDYLVSMFRRLQP 650
            VPFKFNV+HH GDLS LN+ ELDI+++EALA+NCVG+LHSV A+GNRRD +VS FRRL P
Sbjct: 279  VPFKFNVLHHSGDLSHLNLAELDIKDDEALAVNCVGALHSVTAVGNRRDIVVSSFRRLHP 338

Query: 649  RIVTVVEEEADLXXXXXXXXXXXXFQECLRWFRVYFESLDECFSKTSNERLILERAAGRA 470
            RI+TVVEEEADL            FQECLRWFRVY ESLDE F +TSNERL+LERAAGRA
Sbjct: 339  RIITVVEEEADLDVGVDGFDFVKGFQECLRWFRVYLESLDESFPRTSNERLMLERAAGRA 398

Query: 469  VVDLVACQPSESIERRETATRWSHRLHAAGFSAVSFSDEVSDDVRALLRRYKEGWIMAPC 290
            +VDLVAC PSESIERRETATRWS RLHA+GFS VSFSDEV DDVRALLRRYKEGW M   
Sbjct: 399  IVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALLRRYKEGWSMTQS 458

Query: 289  SDAGIFLMWKDQPVVWASAWKP 224
            SDAGIFL WKDQPVVW SAWKP
Sbjct: 459  SDAGIFLSWKDQPVVWTSAWKP 480


>ref|XP_002525276.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus
            communis] gi|223535434|gb|EEF37104.1| Chitin-inducible
            gibberellin-responsive protein, putative [Ricinus
            communis]
          Length = 512

 Score =  607 bits (1565), Expect = e-171
 Identities = 300/422 (71%), Positives = 342/422 (81%), Gaps = 8/422 (1%)
 Frame = -2

Query: 1465 NSTFHESSSADQFSYSPAQDLTLEFGSLISGKWASDILLEAARAMAENNTTRLQQLIWML 1286
            N+T     S D FS+SP+ DL  +F S    +WA+DILLE ARA+A+ N+ R+QQL+WML
Sbjct: 95   NTTTSTLESTDHFSFSPSHDLNFDFSS----RWATDILLETARAIADKNSARVQQLMWML 150

Query: 1285 NELSSPYGDTDQKLASYFLRALFNRMTGSGQKSYRSLTSASEKTCSFESTRKTVLKFQEV 1106
            NEL SPYGD D+KLASYFL+ALF+RMT SG++ YR+L SAS+KTCSFESTRK VLKFQEV
Sbjct: 151  NELGSPYGDIDKKLASYFLQALFSRMTDSGERCYRTLASASDKTCSFESTRKMVLKFQEV 210

Query: 1105 SPWTTFGHVACNGAIMEALEGETKLHIIDISNTYCTQWPTLLEALATHTDETPQLRLTTV 926
            SPWTTFGHV+CNGAIMEA EGE+KLHIIDISNTYCTQWPTLLEALAT TDETP LRLTT+
Sbjct: 211  SPWTTFGHVSCNGAIMEAFEGESKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTI 270

Query: 925  VXXXXXXXXXXXA--------QKVMREIGNRMEKFARLMGVPFKFNVVHHVGDLSELNVG 770
            V                    QKVM+EIG+RMEKFARLMGVPFKFNV+HH GDL +LN+ 
Sbjct: 271  VASKTNGGGGGGGGNCGLVSAQKVMKEIGSRMEKFARLMGVPFKFNVIHHAGDLCDLNLS 330

Query: 769  ELDIREEEALAINCVGSLHSVQALGNRRDYLVSMFRRLQPRIVTVVEEEADLXXXXXXXX 590
            ELDI+E+EALAINC+GSLHSV  + NRRDY++S FRRLQPRI+T+VEEEADL        
Sbjct: 331  ELDIKEDEALAINCIGSLHSVTTVANRRDYIISNFRRLQPRIITIVEEEADLDVGIDGLD 390

Query: 589  XXXXFQECLRWFRVYFESLDECFSKTSNERLILERAAGRAVVDLVACQPSESIERRETAT 410
                FQECLRWFRVYFESL+E FS+TSNERL+LER+AGRA+VDLVACQPSESIERRE AT
Sbjct: 391  FVRGFQECLRWFRVYFESLEESFSRTSNERLMLERSAGRAIVDLVACQPSESIERREKAT 450

Query: 409  RWSHRLHAAGFSAVSFSDEVSDDVRALLRRYKEGWIMAPCSDAGIFLMWKDQPVVWASAW 230
            RWS RLHA G+S + FSDEV DDVRALLRRYKEGW M     AGIFL WK+QPVVWASAW
Sbjct: 451  RWSSRLHACGYSPILFSDEVCDDVRALLRRYKEGWSMTQSGHAGIFLCWKEQPVVWASAW 510

Query: 229  KP 224
            KP
Sbjct: 511  KP 512


>dbj|BAF91723.1| putative SHORT-ROOT protein [Ipomoea nil]
          Length = 505

 Score =  607 bits (1564), Expect = e-171
 Identities = 305/418 (72%), Positives = 346/418 (82%), Gaps = 10/418 (2%)
 Frame = -2

Query: 1447 SSSADQFSYS---PAQDLTLEFGSLISGKWASDILLEAARAMAENNTTRLQQLIWMLNEL 1277
            +SS    SYS   P  D  LEFGS  SGKWA++IL+E ARA+AE N+ R+QQL+WMLNEL
Sbjct: 88   TSSTPPHSYSHPQPTFDPNLEFGSAFSGKWATEILVETARAVAEKNSGRVQQLMWMLNEL 147

Query: 1276 SSPYGDTDQKLASYFLRALFNRMTGSGQKSYRSLTSASEKTCSFESTRKTVLKFQEVSPW 1097
            SSPYGDTDQKLA+YFL+ALF+RMT +G ++YRSL SAS+KTCSFESTRK VLKFQEVSPW
Sbjct: 148  SSPYGDTDQKLAAYFLQALFSRMTDTGDRTYRSLVSASDKTCSFESTRKMVLKFQEVSPW 207

Query: 1096 TTFGHVACNGAIMEALEGETKLHIIDISNTYCTQWPTLLEALATHTDETPQLRLTTVVXX 917
            TTFGHVACNGAIMEA EGE+KLHI+DISNT+CTQWPTLLEALAT TDETP LRLTTVV  
Sbjct: 208  TTFGHVACNGAIMEAFEGESKLHIVDISNTFCTQWPTLLEALATRTDETPHLRLTTVVVN 267

Query: 916  XXXXXXXXXA----QKVMREIGNRMEKFARLMGVPFKFNVVHHVGDLSELNVGELDIREE 749
                          QKVM+EIGNRMEKF RLMGVPFKFNV+HH GDLS+L++  LDI+E+
Sbjct: 268  KAFGGGGSGGAASIQKVMKEIGNRMEKFGRLMGVPFKFNVIHHSGDLSDLDLSALDIKED 327

Query: 748  EALAINCVGSLHSVQALGNRRDYLVSMFRRLQPRIVTVVEEEADLXXXXXXXXXXXXFQE 569
            EALAIN VG+LHSV A+G+RRDYL+S+FRRLQPRI+TVVEEEA++            FQE
Sbjct: 328  EALAINSVGALHSVTAVGSRRDYLISVFRRLQPRILTVVEEEANVDVGVEGFDFVRDFQE 387

Query: 568  CLRWFRVYFESLDECFSKTSNERLILERAAGRAVVDLVACQPSESIERRETATRWSHRLH 389
            CLRWFRVYFESLDE F KTSNERL+LER AGRA+VDLVAC PS+SIERRETA RWS RLH
Sbjct: 388  CLRWFRVYFESLDESFPKTSNERLMLERQAGRAIVDLVACPPSQSIERRETAERWSRRLH 447

Query: 388  AAGFSAVSFSDEVSDDVRALLRRYKEGWIMAPCS---DAGIFLMWKDQPVVWASAWKP 224
            AAGF+ + +SDEV DDVRALLRRY+EGW MAPCS    AGIFL WKDQPVVWASAW+P
Sbjct: 448  AAGFTPIPYSDEVCDDVRALLRRYREGWTMAPCSGDLSAGIFLSWKDQPVVWASAWRP 505


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