BLASTX nr result

ID: Panax21_contig00010662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010662
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325057.1| predicted protein [Populus trichocarpa] gi|2...    87   5e-15
ref|XP_002271381.1| PREDICTED: uncharacterized protein LOC100252...    85   3e-14
emb|CBI17833.3| unnamed protein product [Vitis vinifera]               77   4e-12
ref|XP_002531658.1| hypothetical protein RCOM_0461870 [Ricinus c...    77   5e-12
gb|ACU19978.1| unknown [Glycine max]                                   75   2e-11

>ref|XP_002325057.1| predicted protein [Populus trichocarpa] gi|222866491|gb|EEF03622.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 41/70 (58%), Positives = 48/70 (68%)
 Frame = -3

Query: 893 DSCCQADTKIGTRRTWSSPNIGALKITIDSKNDDQNALMLSIEATPKEKGSKSVFGKMSC 714
           D  CQ D  IG+RRTWSSPN GALKI I   +  ++ +M S+EATPKEKG K  F K  C
Sbjct: 195 DIICQVDKTIGSRRTWSSPNFGALKIVIAQDDGQRDKVMSSVEATPKEKGYKPFFWKQRC 254

Query: 713 GDHPQAKGGI 684
           G+H QAKG I
Sbjct: 255 GEHSQAKGSI 264


>ref|XP_002271381.1| PREDICTED: uncharacterized protein LOC100252969 [Vitis vinifera]
          Length = 336

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 57/128 (44%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = -3

Query: 893 DSCCQADTKIGTRRTWSSPNIGALKITIDSKNDDQNALMLSIEATPKEKGSKSVFGKMSC 714
           D  CQAD   GTRRT +SP  G+ KI I  +++    L+ SIEATPK KGSK+V  K   
Sbjct: 218 DINCQADRTTGTRRTGNSPP-GSWKIVIADEDEHSKKLVPSIEATPKGKGSKAVLWKQRW 276

Query: 713 GDHPQAKGGILCQTQLRGITGINQLFRMVRGSQRQLQT-LNLRRNHSFQXXXXXXXXXXX 537
           G+HPQAK         RGI   NQ+F  V G QRQLQ+ L L+ + S Q           
Sbjct: 277 GEHPQAK---------RGINWFNQIFGRVGGLQRQLQSPLQLQFSCSVQLTIALMLTIFL 327

Query: 536 XASFILYS 513
              F+LYS
Sbjct: 328 IVPFVLYS 335


>emb|CBI17833.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 53/122 (43%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = -3

Query: 875 DTKIGTRRTWSSPNIGALKITIDSKNDDQNALMLSIEATPKEKGSKSVFGKMSCGDHPQA 696
           D   GTRRT +SP  G+ KI I  +++    L+ SIEATPK KGSK+V  K   G+HPQA
Sbjct: 7   DRTTGTRRTGNSPP-GSWKIVIADEDEHSKKLVPSIEATPKGKGSKAVLWKQRWGEHPQA 65

Query: 695 KGGILCQTQLRGITGINQLFRMVRGSQRQLQT-LNLRRNHSFQXXXXXXXXXXXXASFIL 519
           K         RGI   NQ+F  V G QRQLQ+ L L+ + S Q              F+L
Sbjct: 66  K---------RGINWFNQIFGRVGGLQRQLQSPLQLQFSCSVQLTIALMLTIFLIVPFVL 116

Query: 518 YS 513
           YS
Sbjct: 117 YS 118


>ref|XP_002531658.1| hypothetical protein RCOM_0461870 [Ricinus communis]
           gi|223528716|gb|EEF30728.1| hypothetical protein
           RCOM_0461870 [Ricinus communis]
          Length = 327

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = -3

Query: 893 DSCCQADTKIGTRRTWSSPNIGALKITIDSKNDDQNALMLSIEATPKEKGSKSVFGKMSC 714
           D  CQAD   GTRR WSSPN GALK+ I +  D+ ++ +  I+ATPKEKGSK +F K  C
Sbjct: 216 DIICQADKTSGTRRIWSSPNFGALKVVI-ADEDEHDSRLSRIDATPKEKGSKPLFWKQKC 274

Query: 713 GDHPQAKG 690
           G+  +AKG
Sbjct: 275 GEFSRAKG 282


>gb|ACU19978.1| unknown [Glycine max]
          Length = 301

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 49/129 (37%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
 Frame = -3

Query: 893 DSCCQADTKIGTRRTWSSPNIGALKITIDSKNDDQNALMLSIEATPKEKGSKSVFGKMSC 714
           D   Q D    TR+TWS PN GALKI I  + + ++    +++ATPKEKG +++F K   
Sbjct: 180 DLVSQTDRTTSTRKTWSPPNYGALKIVIADEGEQRDKPTRTVDATPKEKGFRNLFWKQKF 239

Query: 713 GDHPQAKGGILCQTQLRGITGINQLFRMVRGSQRQLQT-LNLRRNHSFQXXXXXXXXXXX 537
            D+PQA   +    Q  G  GI Q       SQRQ Q+ L+LR   S Q           
Sbjct: 240 EDYPQATRIVRMSNQRFGGIGICQ-------SQRQFQSPLHLRYGCSVQVTLALMLTIFL 292

Query: 536 XASFILYST 510
              F+LYST
Sbjct: 293 IVPFVLYST 301


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