BLASTX nr result

ID: Panax21_contig00010646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010646
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-l...   140   2e-31
ref|XP_002320221.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002529964.1| gtpase activating protein, putative [Ricinus...    98   2e-18
ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|2...    95   1e-17
emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]    87   5e-15

>ref|XP_003633913.1| PREDICTED: rho GTPase-activating protein 4-like [Vitis vinifera]
          Length = 474

 Score =  140 bits (354), Expect = 2e-31
 Identities = 79/152 (51%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
 Frame = -1

Query: 722 EREESATTVQLLSSCADSPSSKGEPHVSSSSHN---EKSLDSCAHEETGTGSLLQSATLD 552
           EREESA   +LLSSC DSPSSK +PH S+S+ N   E++ D CA EE      L+   LD
Sbjct: 325 EREESAAKSRLLSSCTDSPSSKDDPHSSNSNRNISCEQTQDGCAPEEHTISDFLKPDALD 384

Query: 551 RLXXXXXXXXXXXXXKNDTEEDYYSISGRKSPVMCRKGNLENGYRGGYDNGEAEGILNRL 372
           RL             K++ EE+Y SISG  SPV+   G L+N   G Y+NGE EGIL+RL
Sbjct: 385 RLESDIEEKFWSSQQKSEAEEEYQSISGSSSPVVGEAGTLKNRCTGEYENGEVEGILDRL 444

Query: 371 SFTKGVRRLCRHPVFQLSKPVKRVDGNVEKLG 276
           S  KGVR+LCRHP+F LSKPVK+    VE LG
Sbjct: 445 SLRKGVRKLCRHPIFHLSKPVKK---TVEPLG 473


>ref|XP_002320221.1| predicted protein [Populus trichocarpa] gi|222860994|gb|EEE98536.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  100 bits (249), Expect = 3e-19
 Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
 Frame = -1

Query: 722 EREESATTVQLLSSCADSPSSKGEPHVSSSSHNEK----SLDSCAHEETGTGSLLQSATL 555
           EREES+  ++LLS+C+DSP  K E    S+ ++++    SL++ A E   TG  L+ AT+
Sbjct: 336 EREESSAKLRLLSTCSDSPGDKSESACHSNLNSKELCKISLNAGAPEIPSTGKFLRPATM 395

Query: 554 DRLXXXXXXXXXXXXXKNDTEEDYYSISGRKSPVMCRKGNLENGYRGGYDNGEAEGILNR 375
           +RL             K D EE++  +S   SP     G L++G +G YD+G+       
Sbjct: 396 NRLESNTEEKYWRFQKKGDGEEEFKPVSS-SSPPFREMGTLDSGCKGEYDSGDW------ 448

Query: 374 LSFTKGVRRLCRHPVFQLSKPVKRVDG 294
           LSF KGVRRLC HPVFQLSKPVK+  G
Sbjct: 449 LSFRKGVRRLCIHPVFQLSKPVKKTRG 475


>ref|XP_002529964.1| gtpase activating protein, putative [Ricinus communis]
           gi|223530526|gb|EEF32407.1| gtpase activating protein,
           putative [Ricinus communis]
          Length = 511

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
 Frame = -1

Query: 722 EREESATTVQLLSSCADSPSSKGEPHVSSSSHNE---KSLDSCAHEETGTGSLLQSATLD 552
           EREESA   +LLS+  D+P  K +    S+ +NE   KSL  C  +   +G  L+SAT++
Sbjct: 371 EREESAAKARLLSAGPDAPGHKSKS-CESNLNNESCGKSLAGCTPQIHTSGEFLRSATMN 429

Query: 551 RLXXXXXXXXXXXXXKNDTEEDYYSISGRKSPVMCRKGNLENGYRGGYDNGEAEGILNRL 372
           RL             +ND EE++ SISG  SP  C    LENG + GYD+G+       L
Sbjct: 430 RLEATTEEKYLSIEKRNDGEEEFESISGG-SPPSCETRALENGCKEGYDSGDW------L 482

Query: 371 SFTKGVRRLCRHPVFQLSKPVKR 303
           S  KGVRRLCRHPVF LSKP  +
Sbjct: 483 SLRKGVRRLCRHPVFHLSKPANK 505


>ref|XP_002301430.1| predicted protein [Populus trichocarpa] gi|222843156|gb|EEE80703.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
 Frame = -1

Query: 722 EREESATTVQLLSSCADSPSSKGEPH--VSSSSHNEKSLDSCAHEETGTGSLLQSATLDR 549
           EREES+   +LLS+CA SPS K + H  ++S    + SL++ A E   TG   +SAT++R
Sbjct: 268 EREESSAKFRLLSACAASPSDKSDCHSNLNSKESCKISLNARAPEIPTTGKFSRSATVNR 327

Query: 548 LXXXXXXXXXXXXXKNDTEEDYYSISGRKSPVMCRKGNLENGYRGGYDNGEAEGILNRLS 369
           +             K+D EE++ S S   SP      +L++G +G  D+G+       LS
Sbjct: 328 VESNAEEKYWSFQKKSDGEEEFKSASS-SSPPFYEMDSLDSGCKGENDSGDW------LS 380

Query: 368 FTKGVRRLCRHPVFQLSKPVKR 303
           F+KGVRRLCRHPVFQLSKPVK+
Sbjct: 381 FSKGVRRLCRHPVFQLSKPVKK 402


>emb|CAN84111.1| hypothetical protein VITISV_038805 [Vitis vinifera]
          Length = 546

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 45/93 (48%), Positives = 56/93 (60%)
 Frame = -1

Query: 596 EETGTGSLLQSATLDRLXXXXXXXXXXXXXKNDTEEDYYSISGRKSPVMCRKGNLENGYR 417
           EE+     L+   LDRL             K++ EE+Y SISG  SPV+   G L+N   
Sbjct: 362 EESAXNDFLKPDALDRLESDIEEKFWSSQQKSEAEEEYQSISGSSSPVVGEAGTLKNRCT 421

Query: 416 GGYDNGEAEGILNRLSFTKGVRRLCRHPVFQLS 318
           G Y+NGE EGIL+RLS  KGVR+LCRHP+F LS
Sbjct: 422 GEYENGEVEGILDRLSLRKGVRKLCRHPIFHLS 454


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