BLASTX nr result

ID: Panax21_contig00010624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010624
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-l...   181   7e-44
emb|CBI21499.3| unnamed protein product [Vitis vinifera]              181   7e-44
emb|CAN66347.1| hypothetical protein VITISV_022486 [Vitis vinifera]   181   7e-44
ref|XP_002528672.1| protein binding protein, putative [Ricinus c...   165   4e-39
ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38

>ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Vitis vinifera]
          Length = 1276

 Score =  181 bits (458), Expect = 7e-44
 Identities = 98/139 (70%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415  SSYD-DFTRTSKNIIRYTTIGSRSPCSSLPERSAHGAAECSTGNLNDEIADKPSTSDQSE 239
            SSYD DFTR SK+ IRYT  GSR  CS+ PE SA  AAECS G LNDEIADKPS+SDQSE
Sbjct: 668  SSYDVDFTRVSKDPIRYTAKGSRGHCSTSPETSAQVAAECSAGTLNDEIADKPSSSDQSE 727

Query: 238  SEFGYRPVQRVRIVPRESDSSSAILKEEELLDAMLLLYNLGLAPNYKQAXXXXXXXXXXX 59
             EF YRPVQ +RIVPRES+ S+A L+EEELLDAMLLLY++GLAP++KQA           
Sbjct: 728  PEFDYRPVQHMRIVPRESNFSTATLREEELLDAMLLLYHIGLAPSFKQASHYMSHQSQSI 787

Query: 58   SLLEETDKQIRDRATGEQL 2
            SLLEETDKQIRDRA GEQL
Sbjct: 788  SLLEETDKQIRDRAYGEQL 806


>emb|CBI21499.3| unnamed protein product [Vitis vinifera]
          Length = 1259

 Score =  181 bits (458), Expect = 7e-44
 Identities = 98/139 (70%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415  SSYD-DFTRTSKNIIRYTTIGSRSPCSSLPERSAHGAAECSTGNLNDEIADKPSTSDQSE 239
            SSYD DFTR SK+ IRYT  GSR  CS+ PE SA  AAECS G LNDEIADKPS+SDQSE
Sbjct: 651  SSYDVDFTRVSKDPIRYTAKGSRGHCSTSPETSAQVAAECSAGTLNDEIADKPSSSDQSE 710

Query: 238  SEFGYRPVQRVRIVPRESDSSSAILKEEELLDAMLLLYNLGLAPNYKQAXXXXXXXXXXX 59
             EF YRPVQ +RIVPRES+ S+A L+EEELLDAMLLLY++GLAP++KQA           
Sbjct: 711  PEFDYRPVQHMRIVPRESNFSTATLREEELLDAMLLLYHIGLAPSFKQASHYMSHQSQSI 770

Query: 58   SLLEETDKQIRDRATGEQL 2
            SLLEETDKQIRDRA GEQL
Sbjct: 771  SLLEETDKQIRDRAYGEQL 789


>emb|CAN66347.1| hypothetical protein VITISV_022486 [Vitis vinifera]
          Length = 1219

 Score =  181 bits (458), Expect = 7e-44
 Identities = 98/139 (70%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415  SSYD-DFTRTSKNIIRYTTIGSRSPCSSLPERSAHGAAECSTGNLNDEIADKPSTSDQSE 239
            SSYD DFTR SK+ IRYT  GSR  CS+ PE SA  AAECS G LNDEIADKPS+SDQSE
Sbjct: 584  SSYDVDFTRVSKDPIRYTAKGSRGHCSTSPETSAQVAAECSAGTLNDEIADKPSSSDQSE 643

Query: 238  SEFGYRPVQRVRIVPRESDSSSAILKEEELLDAMLLLYNLGLAPNYKQAXXXXXXXXXXX 59
             EF YRPVQ +RIVPRES+ S+A L+EEELLDAMLLLY++GLAP++KQA           
Sbjct: 644  PEFDYRPVQHMRIVPRESNFSTATLREEELLDAMLLLYHIGLAPSFKQASHYMSHQSQSI 703

Query: 58   SLLEETDKQIRDRATGEQL 2
            SLLEETDKQIRDRA GEQL
Sbjct: 704  SLLEETDKQIRDRAYGEQL 722


>ref|XP_002528672.1| protein binding protein, putative [Ricinus communis]
            gi|223531895|gb|EEF33711.1| protein binding protein,
            putative [Ricinus communis]
          Length = 1348

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/139 (61%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415  SSYD-DFTRTSKNIIRYTTIGSRSPCSSLPERSAHGAAECSTGNLNDEIADKPSTSDQSE 239
            SSYD + ++ SK+  RY + GSR  C+ +PERS H AAECS G+LNDEIADKPSTSDQSE
Sbjct: 669  SSYDVELSKMSKHQTRYISKGSRVHCTPIPERSTHVAAECSAGSLNDEIADKPSTSDQSE 728

Query: 238  SEFGYRPVQRVRIVPRESDSSSAILKEEELLDAMLLLYNLGLAPNYKQAXXXXXXXXXXX 59
            SEFGY P++ +RIVPRES+ SS  L+EEELLD +LLLY++G+APN+KQA           
Sbjct: 729  SEFGYHPMRDMRIVPRESNMSSDTLREEELLDTLLLLYHIGVAPNFKQASYYMSHQSQSI 788

Query: 58   SLLEETDKQIRDRATGEQL 2
            SLL+ETDKQIR+R   EQL
Sbjct: 789  SLLDETDKQIRERGCSEQL 807


>ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|222855797|gb|EEE93344.1|
            predicted protein [Populus trichocarpa]
          Length = 827

 Score =  163 bits (413), Expect = 1e-38
 Identities = 85/139 (61%), Positives = 106/139 (76%), Gaps = 1/139 (0%)
 Frame = -3

Query: 415  SSYD-DFTRTSKNIIRYTTIGSRSPCSSLPERSAHGAAECSTGNLNDEIADKPSTSDQSE 239
            SS+D + ++ SK+ IRY   GSR  C  +P+RSAH AAECS G+LNDEIADKPSTSDQSE
Sbjct: 666  SSHDIELSKISKHQIRYNAKGSRVHCGPIPDRSAHVAAECSEGSLNDEIADKPSTSDQSE 725

Query: 238  SEFGYRPVQRVRIVPRESDSSSAILKEEELLDAMLLLYNLGLAPNYKQAXXXXXXXXXXX 59
             +FGYRP++ +RIV RESD SSA L+EEELLD +LLLY++G+APN+KQA           
Sbjct: 726  PDFGYRPMRDIRIVQRESDVSSATLREEELLDTLLLLYHIGVAPNFKQASHYMSHQAQSI 785

Query: 58   SLLEETDKQIRDRATGEQL 2
            SLLEETDKQI++R   E+L
Sbjct: 786  SLLEETDKQIKERVCSEKL 804


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