BLASTX nr result

ID: Panax21_contig00010612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010612
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   236   2e-77
dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]        231   3e-71
ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis ...   231   3e-71
ref|NP_199722.2| fanconi anemia group I protein [Arabidopsis tha...   231   3e-71
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-70

>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  236 bits (601), Expect(2) = 2e-77
 Identities = 122/175 (69%), Positives = 144/175 (82%)
 Frame = -1

Query: 604 GHKCVNSIIDNILSHDWSKVLLVKMVLIIREFTFLDKGRCREFVDKVFDGMKNVELQDLP 425
           G   VNS++D++L+ DWSK LLVK+V ++REF++LDKGRCREF++KVF GMK V+LQDLP
Sbjct: 176 GGDFVNSVVDHVLTSDWSKALLVKVVSLLREFSYLDKGRCREFLEKVFVGMKGVDLQDLP 235

Query: 424 SLVYQLLVLASKGFSKREVIEGIVMFFGSKMGSKAGSIVRQVEGTVLLHLNFAVKQDPSL 245
           SLVYQLLVLASKGFSKREVIEGIVMFFGSKMGSKA SIVRQVEGTVLLH+NFAVKQDPSL
Sbjct: 236 SLVYQLLVLASKGFSKREVIEGIVMFFGSKMGSKATSIVRQVEGTVLLHVNFAVKQDPSL 295

Query: 244 GQELMGIVRSDIRVFNYFVVVMLLSIARVRRFSESSVGILKTALVTAYKDYKFAK 80
           GQE++G+V                   RVRRFSESS+GILK AL+ AY+D+K A+
Sbjct: 296 GQEVLGLV-------------------RVRRFSESSMGILKAALIMAYRDFKSAE 331



 Score = 80.9 bits (198), Expect(2) = 2e-77
 Identities = 57/165 (34%), Positives = 77/165 (46%)
 Frame = -2

Query: 1092 TSHGNPPSPLSDVDIIRLAQQHYPQTTAVLPPFILSPNSHQTLIXXXXXXXXXXXXXXXX 913
            ++ G  P  L+D DI+RLA++H PQT+A LP F+LS  SH TLI                
Sbjct: 11   STRGPSPPQLTDDDIVRLAREH-PQTSASLPSFLLSSTSHPTLISYLHSRAAAASPSLAV 69

Query: 912  XXXXXXXXXXXXXSPHQTPXXXXXXXXXXXXXXXLFNSHKIPHDRNSFTTLQLFLFHLEN 733
                         SPH +P               LFNS +IPHDRNS  T+Q+F  HLE 
Sbjct: 70   ADYTFSLLSLISLSPH-SPPLSTLFSSLLLAYIKLFNSRQIPHDRNSLKTIQIFYLHLEI 128

Query: 732  IPIPKLPTISNSIVSNFPQIIEPDXXXXXXXXXXXXXLIINSKDI 598
             P   L  ++++IV +  QI+  D             LI NS++I
Sbjct: 129  APNHDLLAVADAIVFDLLQIVNQDDAQLLDLLPRCLDLIRNSEEI 173


>dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1487

 Score =  231 bits (590), Expect(2) = 3e-71
 Identities = 112/171 (65%), Positives = 144/171 (84%)
 Frame = -1

Query: 592 VNSIIDNILSHDWSKVLLVKMVLIIREFTFLDKGRCREFVDKVFDGMKNVELQDLPSLVY 413
           VNS ID +LS +W+K LL KMV + +EF+FLDKGR  E V+KVF G+K ++LQDLPSLVY
Sbjct: 175 VNSAIDRVLSCEWNKALLTKMVSLAKEFSFLDKGRKSELVEKVFVGIKLIDLQDLPSLVY 234

Query: 412 QLLVLASKGFSKREVIEGIVMFFGSKMGSKAGSIVRQVEGTVLLHLNFAVKQDPSLGQEL 233
           QLLVLASKGF KREVI G+V +FGSK  ++  S+VRQ+EGTVLLH+NFAVKQDPSLGQE+
Sbjct: 235 QLLVLASKGFCKREVIGGVVGYFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGQEV 294

Query: 232 MGIVRSDIRVFNYFVVVMLLSIARVRRFSESSVGILKTALVTAYKDYKFAK 80
           + +V+SD+R FN+F V +L S+ARVR+F ESS+G+L+TAL+TAY DY+ +K
Sbjct: 295 VALVKSDLRAFNHFTVAVLFSVARVRKFGESSLGMLRTALLTAYNDYRLSK 345



 Score = 64.7 bits (156), Expect(2) = 3e-71
 Identities = 44/136 (32%), Positives = 64/136 (47%)
 Frame = -2

Query: 1068 PLSDVDIIRLAQQHYPQTTAVLPPFILSPNSHQTLIXXXXXXXXXXXXXXXXXXXXXXXX 889
            PL+D DIIRLAQ H+ QT   LPP++LSP+SH +L+                        
Sbjct: 14   PLTDKDIIRLAQYHHCQTGFSLPPYLLSPSSHDSLLSYLKSRSSSPSPSKQVSEYVIALL 73

Query: 888  XXXXXSPHQTPXXXXXXXXXXXXXXXLFNSHKIPHDRNSFTTLQLFLFHLENIPIPKLPT 709
                 SP  TP               +FNS KIP D +S  T+QLF   L  + + ++ +
Sbjct: 74   SLISLSP-TTPSLCSLLASLLISYTQIFNSCKIPSDSDSLKTIQLFGTLLRYLHVKEVKS 132

Query: 708  ISNSIVSNFPQIIEPD 661
            + +SI+S   ++I  D
Sbjct: 133  VVDSILSGVTRVITVD 148


>ref|NP_001119400.1| fanconi anemia group I protein [Arabidopsis thaliana]
           gi|332008389|gb|AED95772.1| fanconi anemia group I
           protein [Arabidopsis thaliana]
          Length = 1470

 Score =  231 bits (590), Expect(2) = 3e-71
 Identities = 112/171 (65%), Positives = 144/171 (84%)
 Frame = -1

Query: 592 VNSIIDNILSHDWSKVLLVKMVLIIREFTFLDKGRCREFVDKVFDGMKNVELQDLPSLVY 413
           VNS ID +LS +W+K LL KMV + +EF+FLDKGR  E V+KVF G+K ++LQDLPSLVY
Sbjct: 175 VNSAIDRVLSCEWNKALLTKMVSLAKEFSFLDKGRKSELVEKVFVGIKLIDLQDLPSLVY 234

Query: 412 QLLVLASKGFSKREVIEGIVMFFGSKMGSKAGSIVRQVEGTVLLHLNFAVKQDPSLGQEL 233
           QLLVLASKGF KREVI G+V +FGSK  ++  S+VRQ+EGTVLLH+NFAVKQDPSLGQE+
Sbjct: 235 QLLVLASKGFCKREVIGGVVGYFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGQEV 294

Query: 232 MGIVRSDIRVFNYFVVVMLLSIARVRRFSESSVGILKTALVTAYKDYKFAK 80
           + +V+SD+R FN+F V +L S+ARVR+F ESS+G+L+TAL+TAY DY+ +K
Sbjct: 295 VALVKSDLRAFNHFTVAVLFSVARVRKFGESSLGMLRTALLTAYNDYRLSK 345



 Score = 64.7 bits (156), Expect(2) = 3e-71
 Identities = 44/136 (32%), Positives = 64/136 (47%)
 Frame = -2

Query: 1068 PLSDVDIIRLAQQHYPQTTAVLPPFILSPNSHQTLIXXXXXXXXXXXXXXXXXXXXXXXX 889
            PL+D DIIRLAQ H+ QT   LPP++LSP+SH +L+                        
Sbjct: 14   PLTDKDIIRLAQYHHCQTGFSLPPYLLSPSSHDSLLSYLKSRSSSPSPSKQVSEYVIALL 73

Query: 888  XXXXXSPHQTPXXXXXXXXXXXXXXXLFNSHKIPHDRNSFTTLQLFLFHLENIPIPKLPT 709
                 SP  TP               +FNS KIP D +S  T+QLF   L  + + ++ +
Sbjct: 74   SLISLSP-TTPSLCSLLASLLISYTQIFNSCKIPSDSDSLKTIQLFGTLLRYLHVKEVKS 132

Query: 708  ISNSIVSNFPQIIEPD 661
            + +SI+S   ++I  D
Sbjct: 133  VVDSILSGVTRVITVD 148


>ref|NP_199722.2| fanconi anemia group I protein [Arabidopsis thaliana]
           gi|332008388|gb|AED95771.1| fanconi anemia group I
           protein [Arabidopsis thaliana]
          Length = 1469

 Score =  231 bits (590), Expect(2) = 3e-71
 Identities = 112/171 (65%), Positives = 144/171 (84%)
 Frame = -1

Query: 592 VNSIIDNILSHDWSKVLLVKMVLIIREFTFLDKGRCREFVDKVFDGMKNVELQDLPSLVY 413
           VNS ID +LS +W+K LL KMV + +EF+FLDKGR  E V+KVF G+K ++LQDLPSLVY
Sbjct: 175 VNSAIDRVLSCEWNKALLTKMVSLAKEFSFLDKGRKSELVEKVFVGIKLIDLQDLPSLVY 234

Query: 412 QLLVLASKGFSKREVIEGIVMFFGSKMGSKAGSIVRQVEGTVLLHLNFAVKQDPSLGQEL 233
           QLLVLASKGF KREVI G+V +FGSK  ++  S+VRQ+EGTVLLH+NFAVKQDPSLGQE+
Sbjct: 235 QLLVLASKGFCKREVIGGVVGYFGSKAETRVASVVRQIEGTVLLHVNFAVKQDPSLGQEV 294

Query: 232 MGIVRSDIRVFNYFVVVMLLSIARVRRFSESSVGILKTALVTAYKDYKFAK 80
           + +V+SD+R FN+F V +L S+ARVR+F ESS+G+L+TAL+TAY DY+ +K
Sbjct: 295 VALVKSDLRAFNHFTVAVLFSVARVRKFGESSLGMLRTALLTAYNDYRLSK 345



 Score = 64.7 bits (156), Expect(2) = 3e-71
 Identities = 44/136 (32%), Positives = 64/136 (47%)
 Frame = -2

Query: 1068 PLSDVDIIRLAQQHYPQTTAVLPPFILSPNSHQTLIXXXXXXXXXXXXXXXXXXXXXXXX 889
            PL+D DIIRLAQ H+ QT   LPP++LSP+SH +L+                        
Sbjct: 14   PLTDKDIIRLAQYHHCQTGFSLPPYLLSPSSHDSLLSYLKSRSSSPSPSKQVSEYVIALL 73

Query: 888  XXXXXSPHQTPXXXXXXXXXXXXXXXLFNSHKIPHDRNSFTTLQLFLFHLENIPIPKLPT 709
                 SP  TP               +FNS KIP D +S  T+QLF   L  + + ++ +
Sbjct: 74   SLISLSP-TTPSLCSLLASLLISYTQIFNSCKIPSDSDSLKTIQLFGTLLRYLHVKEVKS 132

Query: 708  ISNSIVSNFPQIIEPD 661
            + +SI+S   ++I  D
Sbjct: 133  VVDSILSGVTRVITVD 148


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
           predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  236 bits (601), Expect(2) = 1e-70
 Identities = 120/178 (67%), Positives = 149/178 (83%), Gaps = 3/178 (1%)
 Frame = -1

Query: 604 GHKCVNSIIDNILSHDWSKVLLVKMVLIIREFT-FLDKGRCREFVDKVFDGMKNVELQDL 428
           G + V  I+D ++  +WSK LLVKMV ++REF  F+DK R REF++KVF GM+ V+LQDL
Sbjct: 167 GREFVGLILDRVIESEWSKGLLVKMVSLVREFIGFIDKVRGREFLEKVFKGMRRVDLQDL 226

Query: 427 PSLVYQLLVLASKGFSKREVIEGIVMFFGSKMGS--KAGSIVRQVEGTVLLHLNFAVKQD 254
           PSLVYQLLVL SKGF+KREVIEGIVMFFGS+ G   +  SIVRQVEGTVLLH+NFAVKQD
Sbjct: 227 PSLVYQLLVLTSKGFNKREVIEGIVMFFGSEFGGPKRGSSIVRQVEGTVLLHVNFAVKQD 286

Query: 253 PSLGQELMGIVRSDIRVFNYFVVVMLLSIARVRRFSESSVGILKTALVTAYKDYKFAK 80
           PSLG+E++G+V+ D R  N+F + +LLS+ARVRRFSESS+GILKT L+TAY+D+KFAK
Sbjct: 287 PSLGKEVIGLVKLDFRALNHFTISVLLSVARVRRFSESSLGILKTVLLTAYRDHKFAK 344



 Score = 58.5 bits (140), Expect(2) = 1e-70
 Identities = 45/146 (30%), Positives = 61/146 (41%)
 Frame = -2

Query: 1107 TMTSTTSHGNPPSPLSDVDIIRLAQQHYPQTTAVLPPFILSPNSHQTLIXXXXXXXXXXX 928
            T T+T S  + P  L+D +II LA Q+       L P++LS +SH TL+           
Sbjct: 6    TATATASSKHQPPQLTDAEIIDLANQNQ------LHPYLLSTSSHPTLLSYLHNRTLSPS 59

Query: 927  XXXXXXXXXXXXXXXXXXSPHQTPXXXXXXXXXXXXXXXLFNSHKIPHDRNSFTTLQLFL 748
                              SPH TP               LF S +IP D NS  T+  F 
Sbjct: 60   PSLPICQYTLSLLSLISLSPH-TPSLSSLLSFLLADYTNLFLSFQIPRDSNSLKTIHFFS 118

Query: 747  FHLENIPIPKLPTISNSIVSNFPQII 670
              L N+PI  L  +S SIV N  +++
Sbjct: 119  TVLNNVPIKDLEAVSESIVLNLSKLV 144


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