BLASTX nr result

ID: Panax21_contig00010602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010602
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305839.1| predicted protein [Populus trichocarpa] gi|2...    47   4e-09
ref|XP_003624387.1| LisH domain and HEAT repeat-containing prote...    45   2e-08
ref|XP_003518631.1| PREDICTED: lisH domain and HEAT repeat-conta...    45   2e-08
ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-conta...    45   2e-08
emb|CBI33619.3| unnamed protein product [Vitis vinifera]               45   2e-08

>ref|XP_002305839.1| predicted protein [Populus trichocarpa] gi|222848803|gb|EEE86350.1|
           predicted protein [Populus trichocarpa]
          Length = 1140

 Score = 47.4 bits (111), Expect(2) = 4e-09
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 347 EILPLIMCAIDCHPDRTTRDSLTH 418
           E+LPL+MCAI+CHPD  TRDSLTH
Sbjct: 455 ELLPLMMCAIECHPDSGTRDSLTH 478



 Score = 38.1 bits (87), Expect(2) = 4e-09
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 417 TLFNLIKRPDEQQRRFIMN 473
           TLFNLIKRPDEQQRR IM+
Sbjct: 479 TLFNLIKRPDEQQRRIIMD 497


>ref|XP_003624387.1| LisH domain and HEAT repeat-containing protein [Medicago
           truncatula] gi|355499402|gb|AES80605.1| LisH domain and
           HEAT repeat-containing protein [Medicago truncatula]
          Length = 1392

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 347 EILPLIMCAIDCHPDRTTRDSLTH 418
           E+LPLIMCAI+ HPD +TRDSLTH
Sbjct: 632 ELLPLIMCAIERHPDSSTRDSLTH 655



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 417 TLFNLIKRPDEQQRRFIMN 473
           TLFNLIKRPDEQQRR IM+
Sbjct: 656 TLFNLIKRPDEQQRRIIMD 674


>ref|XP_003518631.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
           homolog [Glycine max]
          Length = 1184

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 347 EILPLIMCAIDCHPDRTTRDSLTH 418
           E+LPLIMCAI+ HPD +TRDSLTH
Sbjct: 485 ELLPLIMCAIERHPDSSTRDSLTH 508



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 417 TLFNLIKRPDEQQRRFIMN 473
           TLFNLIKRPDEQQRR IM+
Sbjct: 509 TLFNLIKRPDEQQRRIIMD 527


>ref|XP_002281005.1| PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468
           homolog [Vitis vinifera]
          Length = 1184

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 347 EILPLIMCAIDCHPDRTTRDSLTH 418
           E+LPLIMCAI+ HPD +TRDSLTH
Sbjct: 484 ELLPLIMCAIERHPDSSTRDSLTH 507



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 417 TLFNLIKRPDEQQRRFIMN 473
           TLFNLIKRPDEQQRR IM+
Sbjct: 508 TLFNLIKRPDEQQRRIIMD 526


>emb|CBI33619.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score = 45.1 bits (105), Expect(2) = 2e-08
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 347 EILPLIMCAIDCHPDRTTRDSLTH 418
           E+LPLIMCAI+ HPD +TRDSLTH
Sbjct: 484 ELLPLIMCAIERHPDSSTRDSLTH 507



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3

Query: 417 TLFNLIKRPDEQQRRFIMN 473
           TLFNLIKRPDEQQRR IM+
Sbjct: 508 TLFNLIKRPDEQQRRIIMD 526


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