BLASTX nr result

ID: Panax21_contig00010539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010539
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280381.2| PREDICTED: F-box protein At2g16365-like [Vit...   151   1e-34
emb|CBI37672.3| unnamed protein product [Vitis vinifera]              145   6e-33
ref|XP_002305437.1| predicted protein [Populus trichocarpa] gi|2...   130   4e-28
ref|XP_002512923.1| hypothetical protein RCOM_1447500 [Ricinus c...   125   9e-27
ref|XP_002313785.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23

>ref|XP_002280381.2| PREDICTED: F-box protein At2g16365-like [Vitis vinifera]
          Length = 583

 Score =  151 bits (381), Expect = 1e-34
 Identities = 99/234 (42%), Positives = 131/234 (55%), Gaps = 13/234 (5%)
 Frame = +2

Query: 50  PSWSSPPAMTELETLQCGCCLHTK---PSSTHDAKTMRIFTYVDSVEGVSGSRPRISQTT 220
           PS SSP  + ELE L        K    +S HD +T RI T VDS++G+ G  P+  QTT
Sbjct: 154 PSRSSPLIVGELEKLNHRSYSQQKMPCSASAHDVETTRICTAVDSLDGLGGCPPKFCQTT 213

Query: 221 HSLLIKKRTDVNLCKENRIFRESGVLDHLNENPSSELHSFSPLCG-HSQLAVKL------ 379
           H ++I K+ D NL K   IFR+S V      N    L + SP  G H +  VKL      
Sbjct: 214 HHVVITKKNDDNLPKGGPIFRDSKVSPEFTGNTLKALLNLSPGFGSHGRHGVKLQPIEGS 273

Query: 380 --SEGKENVQDVNAFEVVPKNELSSETDTMDMSNFKD-NHLSGVNSSSSNKDVTVDTDSP 550
             S+GKE+V +V    +  KNE S+ETDTM+M  F++ NHLSG  SS  NKDV    +  
Sbjct: 274 IDSQGKEDVGEVRISAINSKNESSAETDTMNMDAFQEENHLSGATSSPLNKDVLRSQNQQ 333

Query: 551 HNDAIASAGGEVRCKRPIPELPDINIELPALSVEENSMDNADPSTSKTQSLDID 712
            + A  +   E R + P  +LPD+N ELPAL    +SMD+ + STS+TQS D+D
Sbjct: 334 TSVATVAPAREFRGRLPNSDLPDMNQELPALPAPASSMDDKEASTSRTQSFDVD 387


>emb|CBI37672.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  145 bits (367), Expect = 6e-33
 Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 10/206 (4%)
 Frame = +2

Query: 125 SSTHDAKTMRIFTYVDSVEGVSGSRPRISQTTHSLLIKKRTDVNLCKENRIFRESGVLDH 304
           +S HD +T RI T VDS++G+ G  P+  QTTH ++I K+ D NL K   IFR+S V   
Sbjct: 5   ASAHDVETTRICTAVDSLDGLGGCPPKFCQTTHHVVITKKNDDNLPKGGPIFRDSKVSPE 64

Query: 305 LNENPSSELHSFSPLCG-HSQLAVKL--------SEGKENVQDVNAFEVVPKNELSSETD 457
              N    L + SP  G H +  VKL        S+GKE+V +V    +  KNE S+ETD
Sbjct: 65  FTGNTLKALLNLSPGFGSHGRHGVKLQPIEGSIDSQGKEDVGEVRISAINSKNESSAETD 124

Query: 458 TMDMSNFKD-NHLSGVNSSSSNKDVTVDTDSPHNDAIASAGGEVRCKRPIPELPDINIEL 634
           TM+M  F++ NHLSG  SS  NKDV    +   + A  +   E R + P  +LPD+N EL
Sbjct: 125 TMNMDAFQEENHLSGATSSPLNKDVLRSQNQQTSVATVAPAREFRGRLPNSDLPDMNQEL 184

Query: 635 PALSVEENSMDNADPSTSKTQSLDID 712
           PAL    +SMD+ + STS+TQS D+D
Sbjct: 185 PALPAPASSMDDKEASTSRTQSFDVD 210


>ref|XP_002305437.1| predicted protein [Populus trichocarpa] gi|222848401|gb|EEE85948.1|
            predicted protein [Populus trichocarpa]
          Length = 730

 Score =  130 bits (326), Expect = 4e-28
 Identities = 88/227 (38%), Positives = 120/227 (52%), Gaps = 32/227 (14%)
 Frame = +2

Query: 128  STHDAKTMRIFTYVDSVEGVSGSRPRISQTTHSLLIKKRTDVNLCKENRIFRESGVLDHL 307
            S HD +TMRI T +DS+E  S   P  +QTTHS  IKK+TDVNL    ++FRES +   +
Sbjct: 324  SVHDGETMRIRTTIDSMEEFSRGPPMYTQTTHSFFIKKKTDVNLPDGAQMFRESAMSTEI 383

Query: 308  NENPSSELHSFSPLCG-HSQLAVK------------------------------LSEGKE 394
                 +EL + SP  G H +  VK                              L+EGKE
Sbjct: 384  KGKMVTELLAISPDFGFHVKQGVKLLPLDSSTGSEGKESTGNVMTSAVDKENDSLAEGKE 443

Query: 395  NVQDVNAFEVVPKNELSSETDTMDMSNFKDNHLSGVNSSSSNKDVTVDTDSPHNDA-IAS 571
            N ++ N   V  +++ S+ETDTMDM  + +NHLSGV S  S+KD+      P + A + S
Sbjct: 444  NTKNANTSAVNEESDSSAETDTMDMDAYCENHLSGVASLQSDKDINEGQKLPASQAGMPS 503

Query: 572  AGGEVRCKRPIPELPDINIELPALSVEENSMDNADPSTSKTQSLDID 712
               E++ ++   ELPDIN EL  L     S DN + STS+TQSLD +
Sbjct: 504  VRQEIKGRQMNTELPDINQELIVLPGLAMSPDNMETSTSRTQSLDAE 550


>ref|XP_002512923.1| hypothetical protein RCOM_1447500 [Ricinus communis]
           gi|223547934|gb|EEF49426.1| hypothetical protein
           RCOM_1447500 [Ricinus communis]
          Length = 718

 Score =  125 bits (314), Expect = 9e-27
 Identities = 85/211 (40%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
 Frame = +2

Query: 110 LHTKPSSTHDAKTMRIFTYVDSVEGVSGSRPRISQTTHSLLIKKRTDVNLCKENRIFRES 289
           L T P S  D +TM++ T + S+E  +   P+ SQTTH  LI K+TDVNL    + FR S
Sbjct: 313 LPTIPPSVQDVETMKMCTTIGSLEEYTICPPKFSQTTHHFLITKKTDVNLFDGGQTFRGS 372

Query: 290 GVLDHLNENPSSELHSFSP-LCGHSQLAVKL--------SEGKENVQDVNAFEVVPKNEL 442
            +         S L + SP L  + +  VKL        SE KEN+++++   V  KNE 
Sbjct: 373 TISTKFKGKRPSGLLTLSPDLAFNVKQGVKLQSLDSSTDSEAKENIENIHTSAVNLKNES 432

Query: 443 SSETDTMDMSNFKDNHLSGVNSSSSNKDVTVDTDSPHND-AIASAGGEVRCKRPIPELPD 619
           S+ETDTMDM   + NHLSG  SS  NKD+     S  ++ AI S     R + P  ELPD
Sbjct: 433 SAETDTMDMDTLRVNHLSGGVSSIPNKDINGAQKSQKSEAAIDSVREGNRGRLPNIELPD 492

Query: 620 INIELPALSVEENSMDNADPSTSKTQSLDID 712
           IN E+ A+    +S D+ + STS+TQSL+++
Sbjct: 493 INQEVTAIPGVTSSADDGEASTSRTQSLNVE 523


>ref|XP_002313785.1| predicted protein [Populus trichocarpa] gi|222850193|gb|EEE87740.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  114 bits (284), Expect = 3e-23
 Identities = 89/271 (32%), Positives = 122/271 (45%), Gaps = 54/271 (19%)
 Frame = +2

Query: 62  SPPAMTELETLQCGCCLHTKPSSTHDAKTMRIFTYVDSVEGVSGSRPRISQTTHSLLIKK 241
           SP    +LE L  G        S HD  TMR+   +DS E  S   P+ +QTTH   I K
Sbjct: 138 SPRDNIKLEKLYHGSYALPSLPSVHDVGTMRMRATIDSTEEFSRGPPKFTQTTHRFFITK 197

Query: 242 RTDVNLCKENRIFRESGVLDHLNENPSSELHSFSPLCG-HSQLAVKL--------SEGKE 394
           +TDVNL    ++FRES           +EL + SP  G H +   ++        SEGKE
Sbjct: 198 KTDVNLPDGAQMFRESATSTEFKGKMVTELLALSPDFGFHVKQGEQMQPLGSSTESEGKE 257

Query: 395 NVQDVNAFEVVPKNE--------------------------------------------L 442
           N  +V A  VV +N+                                            L
Sbjct: 258 NTGNVKASAVVKENDSSADGIENTENVKTSAVDEENDSSADGIENTENVKTSAVDEENDL 317

Query: 443 SSETDTMDMSNFKDNHLSGVNSSSSNKDVTVDTDSPHNDA-IASAGGEVRCKRPIPELPD 619
           S+ETD MD+  F +NH+SGV S  S+KD++    SP + A +     E + ++   ELPD
Sbjct: 318 SAETDAMDIHAFCENHISGVASLQSHKDISEGQKSPASQAGVPPVRQETKGRQMNTELPD 377

Query: 620 INIELPALSVEENSMDNADPSTSKTQSLDID 712
           I  ELP L     S D+ + STS+TQSLD++
Sbjct: 378 IKQELPVLPGVARSPDDMETSTSRTQSLDVE 408