BLASTX nr result

ID: Panax21_contig00010518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010518
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|2...   224   5e-56
ref|XP_003634760.1| PREDICTED: nuclear transcription factor Y su...   223   8e-56
emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]   223   8e-56
ref|XP_003633344.1| PREDICTED: nuclear transcription factor Y su...   219   1e-54
emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]   219   1e-54

>ref|XP_002320523.1| predicted protein [Populus trichocarpa] gi|222861296|gb|EEE98838.1|
            predicted protein [Populus trichocarpa]
          Length = 177

 Score =  224 bits (571), Expect = 5e-56
 Identities = 116/171 (67%), Positives = 128/171 (74%)
 Frame = +3

Query: 540  SQREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKR 719
            S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF+TGEASDKCQREKR
Sbjct: 18   SAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 77

Query: 720  KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSALAGRPAGEKDGSVATXXXXX 899
            KTINGDDLLWAMTTLGFE+YVEPLK+YLQ++REMEGEKS++ GRPAGEKDG         
Sbjct: 78   KTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSM-GRPAGEKDGG-------- 128

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXMPSNMMIMGHQHQGHVYGSGSYYPIAN 1052
                                    M   MM+MGH HQGHVYG+G ++   N
Sbjct: 129  ----GGANSTGGGGGGFNGGGGQGMYGGMMMMGHHHQGHVYGAGGFHHQGN 175


>ref|XP_003634760.1| PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis
            vinifera] gi|296089911|emb|CBI39730.3| unnamed protein
            product [Vitis vinifera]
          Length = 210

 Score =  223 bits (569), Expect = 8e-56
 Identities = 120/171 (70%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
 Frame = +3

Query: 540  SQREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKR 719
            S REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF+TGEASDKCQREKR
Sbjct: 20   SPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 79

Query: 720  KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSALAGRPAGEKDGSVATXXXXX 899
            KTINGDDLLWAMTTLGFEDYV+PLK+YL RFREMEGEK+++ GR  GEKDG  A      
Sbjct: 80   KTINGDDLLWAMTTLGFEDYVDPLKIYLHRFREMEGEKTSM-GR-QGEKDGPSAA----G 133

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXMPSNMMIMG-HQHQGHVYGSGSYYPIA 1049
                                    +PS MM+MG HQHQGHVYGS +Y+P+A
Sbjct: 134  GNGSVVNPANTGSGGFGETGMYGAIPSTMMMMGHHQHQGHVYGSSAYHPMA 184


>emb|CAN64334.1| hypothetical protein VITISV_039730 [Vitis vinifera]
          Length = 1098

 Score =  223 bits (569), Expect = 8e-56
 Identities = 121/171 (70%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
 Frame = +3

Query: 540  SQREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKR 719
            S REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF+TGEASDKCQREKR
Sbjct: 908  SPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 967

Query: 720  KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSALAGRPAGEKDGSVATXXXXX 899
            KTINGDDLLWAMTTLGFEDYV+PLK+YL RFREMEGEK+++ GR  GEKDG  A      
Sbjct: 968  KTINGDDLLWAMTTLGFEDYVDPLKIYLHRFREMEGEKTSM-GR-QGEKDGPSAA----G 1021

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXMPSNMMIMG-HQHQGHVYGSGSYYPIA 1049
                                    +PS MM+MG HQHQGHVYGS +Y+P+A
Sbjct: 1022 GNGSVVNPANTGSGGFGEXGMYGAIPSTMMMMGHHQHQGHVYGSSAYHPMA 1072


>ref|XP_003633344.1| PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis
            vinifera]
          Length = 245

 Score =  219 bits (559), Expect = 1e-54
 Identities = 117/171 (68%), Positives = 129/171 (75%)
 Frame = +3

Query: 540  SQREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKR 719
            S REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF+TGEASDKCQREKR
Sbjct: 51   SAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 110

Query: 720  KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSALAGRPAGEKDGSVATXXXXX 899
            KTINGDDLLWAMTTLGFE+YVEPLK+YLQ++REMEGEKS+L GRP GEKDGS        
Sbjct: 111  KTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSLGGRP-GEKDGS-------G 162

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXMPSNMMIMGHQHQGHVYGSGSYYPIAN 1052
                                    M   MM+MGH HQG  YGSGS++ +++
Sbjct: 163  GGGAAAGGGGAMSSGSSGGFNGGGMYGGMMMMGH-HQGQAYGSGSFHHMSS 212


>emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]
          Length = 459

 Score =  219 bits (559), Expect = 1e-54
 Identities = 117/171 (68%), Positives = 129/171 (75%)
 Frame = +3

Query: 540  SQREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKR 719
            S REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF+TGEASDKCQREKR
Sbjct: 269  SAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 328

Query: 720  KTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREMEGEKSALAGRPAGEKDGSVATXXXXX 899
            KTINGDDLLWAMTTLGFE+YVEPLK+YLQ++REMEGEKS+L GRP GEKDGS        
Sbjct: 329  KTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGEKSSLGGRP-GEKDGS-------G 380

Query: 900  XXXXXXXXXXXXXXXXXXXXXXXXMPSNMMIMGHQHQGHVYGSGSYYPIAN 1052
                                    M   MM+MGH HQG  YGSGS++ +++
Sbjct: 381  GGGAAAGGGGAMSSGSSGGFNGGGMYGGMMMMGH-HQGQAYGSGSFHHMSS 430


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