BLASTX nr result

ID: Panax21_contig00010514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00010514
         (1462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   177   8e-42
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   176   1e-41
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              175   3e-41
ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...   165   2e-38
ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycin...   164   5e-38

>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  177 bits (448), Expect = 8e-42
 Identities = 91/107 (85%), Positives = 97/107 (90%)
 Frame = +3

Query: 3   LRRLHLYNIERMDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFES 182
           L+RLHLYNIERMDNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLIERLFFES
Sbjct: 245 LKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFES 304

Query: 183 SKTGRDDSLKLSPTCSDLVHNCPNLNSLALRGFKLQDFKVLALVKVM 323
           SKTGRDDSLK SPTC DLV+NCP+L SLALRGFKL D+KV  LVKV+
Sbjct: 305 SKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKVV 350


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  176 bits (447), Expect = 1e-41
 Identities = 91/106 (85%), Positives = 96/106 (90%)
 Frame = +3

Query: 3   LRRLHLYNIERMDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFES 182
           L+RLHLYNIERMDNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLIERLFFES
Sbjct: 245 LKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFES 304

Query: 183 SKTGRDDSLKLSPTCSDLVHNCPNLNSLALRGFKLQDFKVLALVKV 320
           SKTGRDDSLK SPTC DLV+NCP+L SLALRGFKL D+KV  LVKV
Sbjct: 305 SKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVKV 349


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  175 bits (443), Expect = 3e-41
 Identities = 90/105 (85%), Positives = 95/105 (90%)
 Frame = +3

Query: 3   LRRLHLYNIERMDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFES 182
           L+RLHLYNIERMDNTAL AALS CPSLLDLEIVGLHVELRQTL SVS +CHLIERLFFES
Sbjct: 245 LKRLHLYNIERMDNTALCAALSACPSLLDLEIVGLHVELRQTLMSVSTNCHLIERLFFES 304

Query: 183 SKTGRDDSLKLSPTCSDLVHNCPNLNSLALRGFKLQDFKVLALVK 317
           SKTGRDDSLK SPTC DLV+NCP+L SLALRGFKL D+KV  LVK
Sbjct: 305 SKTGRDDSLK-SPTCVDLVNNCPHLTSLALRGFKLHDYKVRILVK 348


>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  165 bits (418), Expect = 2e-38
 Identities = 87/105 (82%), Positives = 91/105 (86%)
 Frame = +3

Query: 3   LRRLHLYNIERMDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFES 182
           L+RLHLYNIERMDNT+L  ALS CPSLLDLEIVGLHVELRQTL SVS +C LIERLFFES
Sbjct: 239 LKRLHLYNIERMDNTSLYGALSACPSLLDLEIVGLHVELRQTLVSVSMNCPLIERLFFES 298

Query: 183 SKTGRDDSLKLSPTCSDLVHNCPNLNSLALRGFKLQDFKVLALVK 317
           SKTGRD+SLK SPTC DLV NCPNL SLALRGFKL D KV  LVK
Sbjct: 299 SKTGRDESLK-SPTCVDLVTNCPNLTSLALRGFKLHDCKVRILVK 342


>ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycine max]
          Length = 480

 Score =  164 bits (415), Expect = 5e-38
 Identities = 84/106 (79%), Positives = 93/106 (87%)
 Frame = +3

Query: 3   LRRLHLYNIERMDNTALSAALSVCPSLLDLEIVGLHVELRQTLESVSKHCHLIERLFFES 182
           LR+LHLYNIERMDN +L AALS CPSLLDLEIVGLHVELRQTL SVS +CHLIERLFFES
Sbjct: 240 LRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLFFES 299

Query: 183 SKTGRDDSLKLSPTCSDLVHNCPNLNSLALRGFKLQDFKVLALVKV 320
           SKTGRDDSLK + TC +LV+NCP+L SL+LRGFKL D KV  LVK+
Sbjct: 300 SKTGRDDSLK-AQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKM 344


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