BLASTX nr result

ID: Panax21_contig00009997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009997
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]          183   1e-44
emb|CBI39012.3| unnamed protein product [Vitis vinifera]              183   1e-44
gb|AFK33823.1| unknown [Lotus japonicus]                              182   2e-44
ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3...   182   3e-44
ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3...   182   3e-44

>ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]
          Length = 264

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/140 (63%), Positives = 98/140 (70%)
 Frame = -1

Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246
           AMQS L+CNGCR+IL+YPRG           VTSVPPPG+EM+QLICGGCRTLLMYTRGA
Sbjct: 93  AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 152

Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMY 66
           TSVRCSCCHTVNL                            P++ VAH+NCGNCRTTLMY
Sbjct: 153 TSVRCSCCHTVNLAP-------------------------APSNQVAHVNCGNCRTTLMY 187

Query: 65  PYGAPSVKCAVCHYVTNVNM 6
           PYGAPSVKCAVCHYVT+V M
Sbjct: 188 PYGAPSVKCAVCHYVTSVGM 207


>emb|CBI39012.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/140 (63%), Positives = 98/140 (70%)
 Frame = -1

Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246
           AMQS L+CNGCR+IL+YPRG           VTSVPPPG+EM+QLICGGCRTLLMYTRGA
Sbjct: 88  AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 147

Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMY 66
           TSVRCSCCHTVNL                            P++ VAH+NCGNCRTTLMY
Sbjct: 148 TSVRCSCCHTVNLAP-------------------------APSNQVAHVNCGNCRTTLMY 182

Query: 65  PYGAPSVKCAVCHYVTNVNM 6
           PYGAPSVKCAVCHYVT+V M
Sbjct: 183 PYGAPSVKCAVCHYVTSVGM 202


>gb|AFK33823.1| unknown [Lotus japonicus]
          Length = 175

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/139 (63%), Positives = 96/139 (69%)
 Frame = -1

Query: 422 MQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGAT 243
           MQSQLVCNGCR+ILLYPRG           +T+VPPPGM+MSQL CGGCRTLLMYTRGA 
Sbjct: 1   MQSQLVCNGCRSILLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAA 60

Query: 242 SVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMYP 63
           SVRCSCCHT                           VNL PA+ VAH+ CGNCRTTLMYP
Sbjct: 61  SVRCSCCHT---------------------------VNLAPANQVAHVPCGNCRTTLMYP 93

Query: 62  YGAPSVKCAVCHYVTNVNM 6
           YGAPSVKCA+CHY+TNVNM
Sbjct: 94  YGAPSVKCALCHYITNVNM 112


>ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 223

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/141 (63%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -1

Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246
           AMQSQLVCNGCR  LLYPRG           +T+VPPPGM+MSQL CGGCRTLLMYTRGA
Sbjct: 47  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 106

Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASN-VAHINCGNCRTTLM 69
           TSVRCSCCHT                           VNL P SN VAH+ CGNCRTTLM
Sbjct: 107 TSVRCSCCHT---------------------------VNLAPVSNQVAHVPCGNCRTTLM 139

Query: 68  YPYGAPSVKCAVCHYVTNVNM 6
           YPYGAPSVKCAVCHY+TN+NM
Sbjct: 140 YPYGAPSVKCAVCHYITNINM 160


>ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1|
           Lsd1-like protein [Medicago truncatula]
          Length = 211

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/141 (63%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -1

Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246
           AMQSQLVCNGCR  LLYPRG           +T+VPPPGM+MSQL CGGCRTLLMYTRGA
Sbjct: 35  AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 94

Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASN-VAHINCGNCRTTLM 69
           TSVRCSCCHT                           VNL P SN VAH+ CGNCRTTLM
Sbjct: 95  TSVRCSCCHT---------------------------VNLAPVSNQVAHVPCGNCRTTLM 127

Query: 68  YPYGAPSVKCAVCHYVTNVNM 6
           YPYGAPSVKCAVCHY+TN+NM
Sbjct: 128 YPYGAPSVKCAVCHYITNINM 148


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