BLASTX nr result
ID: Panax21_contig00009997
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00009997 (425 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera] 183 1e-44 emb|CBI39012.3| unnamed protein product [Vitis vinifera] 183 1e-44 gb|AFK33823.1| unknown [Lotus japonicus] 182 2e-44 ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|3... 182 3e-44 ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|3... 182 3e-44 >ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera] Length = 264 Score = 183 bits (464), Expect = 1e-44 Identities = 89/140 (63%), Positives = 98/140 (70%) Frame = -1 Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246 AMQS L+CNGCR+IL+YPRG VTSVPPPG+EM+QLICGGCRTLLMYTRGA Sbjct: 93 AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 152 Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMY 66 TSVRCSCCHTVNL P++ VAH+NCGNCRTTLMY Sbjct: 153 TSVRCSCCHTVNLAP-------------------------APSNQVAHVNCGNCRTTLMY 187 Query: 65 PYGAPSVKCAVCHYVTNVNM 6 PYGAPSVKCAVCHYVT+V M Sbjct: 188 PYGAPSVKCAVCHYVTSVGM 207 >emb|CBI39012.3| unnamed protein product [Vitis vinifera] Length = 259 Score = 183 bits (464), Expect = 1e-44 Identities = 89/140 (63%), Positives = 98/140 (70%) Frame = -1 Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246 AMQS L+CNGCR+IL+YPRG VTSVPPPG+EM+QLICGGCRTLLMYTRGA Sbjct: 88 AMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGA 147 Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMY 66 TSVRCSCCHTVNL P++ VAH+NCGNCRTTLMY Sbjct: 148 TSVRCSCCHTVNLAP-------------------------APSNQVAHVNCGNCRTTLMY 182 Query: 65 PYGAPSVKCAVCHYVTNVNM 6 PYGAPSVKCAVCHYVT+V M Sbjct: 183 PYGAPSVKCAVCHYVTSVGM 202 >gb|AFK33823.1| unknown [Lotus japonicus] Length = 175 Score = 182 bits (463), Expect = 2e-44 Identities = 88/139 (63%), Positives = 96/139 (69%) Frame = -1 Query: 422 MQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGAT 243 MQSQLVCNGCR+ILLYPRG +T+VPPPGM+MSQL CGGCRTLLMYTRGA Sbjct: 1 MQSQLVCNGCRSILLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGAA 60 Query: 242 SVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASNVAHINCGNCRTTLMYP 63 SVRCSCCHT VNL PA+ VAH+ CGNCRTTLMYP Sbjct: 61 SVRCSCCHT---------------------------VNLAPANQVAHVPCGNCRTTLMYP 93 Query: 62 YGAPSVKCAVCHYVTNVNM 6 YGAPSVKCA+CHY+TNVNM Sbjct: 94 YGAPSVKCALCHYITNVNM 112 >ref|XP_003630013.1| Lsd1-like protein [Medicago truncatula] gi|355524035|gb|AET04489.1| Lsd1-like protein [Medicago truncatula] Length = 223 Score = 182 bits (461), Expect = 3e-44 Identities = 90/141 (63%), Positives = 96/141 (68%), Gaps = 1/141 (0%) Frame = -1 Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246 AMQSQLVCNGCR LLYPRG +T+VPPPGM+MSQL CGGCRTLLMYTRGA Sbjct: 47 AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 106 Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASN-VAHINCGNCRTTLM 69 TSVRCSCCHT VNL P SN VAH+ CGNCRTTLM Sbjct: 107 TSVRCSCCHT---------------------------VNLAPVSNQVAHVPCGNCRTTLM 139 Query: 68 YPYGAPSVKCAVCHYVTNVNM 6 YPYGAPSVKCAVCHY+TN+NM Sbjct: 140 YPYGAPSVKCAVCHYITNINM 160 >ref|XP_003630012.1| Lsd1-like protein [Medicago truncatula] gi|355524034|gb|AET04488.1| Lsd1-like protein [Medicago truncatula] Length = 211 Score = 182 bits (461), Expect = 3e-44 Identities = 90/141 (63%), Positives = 96/141 (68%), Gaps = 1/141 (0%) Frame = -1 Query: 425 AMQSQLVCNGCRTILLYPRGXXXXXXXXXXXVTSVPPPGMEMSQLICGGCRTLLMYTRGA 246 AMQSQLVCNGCR LLYPRG +T+VPPPGM+MSQL CGGCRTLLMYTRGA Sbjct: 35 AMQSQLVCNGCRNTLLYPRGATNVCCALCNTITAVPPPGMDMSQLYCGGCRTLLMYTRGA 94 Query: 245 TSVRCSCCHTVNLXXXXXXXXXXXXXXXXXXXXXXXXVNLVPASN-VAHINCGNCRTTLM 69 TSVRCSCCHT VNL P SN VAH+ CGNCRTTLM Sbjct: 95 TSVRCSCCHT---------------------------VNLAPVSNQVAHVPCGNCRTTLM 127 Query: 68 YPYGAPSVKCAVCHYVTNVNM 6 YPYGAPSVKCAVCHY+TN+NM Sbjct: 128 YPYGAPSVKCAVCHYITNINM 148