BLASTX nr result

ID: Panax21_contig00009992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009992
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002309645.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002515477.1| WD-repeat protein, putative [Ricinus communi...    97   2e-18
emb|CAN64663.1| hypothetical protein VITISV_035348 [Vitis vinifera]    97   2e-18

>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  104 bits (259), Expect = 9e-21
 Identities = 62/123 (50%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +3

Query: 75  NGGNVHFDMNKNQILAAGDQYHIKFWDMDNASLLDICNAEGGLPXXXXXXXXXXXXXXXX 254
           +GG V FD  KN+ LAAGD + IKFWDMDN +LL   +AEGGLP                
Sbjct: 591 SGGVVKFDTTKNRFLAAGDDFMIKFWDMDNNNLLTTIDAEGGLP---------------- 634

Query: 255 XXXXXXXCTPLINFNIEGNLLAVSTNDNRIKILATSDGMKLLHTVHD--LGASRIAANSV 428
                   +P I FN EG LLAVSTNDN IKILA SDG++LL TV      ASR ++ +V
Sbjct: 635 -------ASPCIRFNKEGTLLAVSTNDNSIKILANSDGIRLLRTVESRTFDASRASSAAV 687

Query: 429 AKA 437
           AKA
Sbjct: 688 AKA 690


>ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1|
           predicted protein [Populus trichocarpa]
          Length = 1132

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 63/129 (48%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  YNG------GNVHFDMNKNQILAAGDQYHIKFWDMDNASLLDICNAEGGLPXXXXXXXXX 233
           YNG      G V FD  KN+ LAA D++ IKFWDMDN +LL   +AEGGLP         
Sbjct: 590 YNGLAKRSVGAVKFDTTKNRFLAAIDEFMIKFWDMDNVNLLTSIDAEGGLP--------- 640

Query: 234 XXXXXXXXXXXXXXCTPLINFNIEGNLLAVSTNDNRIKILATSDGMKLLHTVHD--LGAS 407
                          +P I FN EG LLAVSTNDN IKILA SDG++LL TV +    AS
Sbjct: 641 --------------ASPCIRFNKEGTLLAVSTNDNSIKILANSDGIRLLRTVENRTFDAS 686

Query: 408 RIAANSVAK 434
           R A+ SV K
Sbjct: 687 RAASASVVK 695


>ref|XP_002309645.1| predicted protein [Populus trichocarpa] gi|222855621|gb|EEE93168.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 62/125 (49%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
 Frame = +3

Query: 81  GNVHFDMNKNQILAAGDQYHIKFWDMDNASLLDICNAEGGLPXXXXXXXXXXXXXXXXXX 260
           G V FD  KN+ LA GD Y IKFWDMDN SLL   +AEGGLP                  
Sbjct: 591 GVVQFDTTKNRFLAVGDDYSIKFWDMDNPSLLTTIDAEGGLP------------------ 632

Query: 261 XXXXXCTPLINFNIEGNLLAVSTNDNRIKILATSDGMKLLHTV--HDLGASR--IAANSV 428
                 +P I FN  GNLLAVS NDNRIKILAT DG+ L+ T   H L ASR  IA+ ++
Sbjct: 633 -----TSPRIRFNKGGNLLAVSANDNRIKILATVDGLCLMRTFEGHSLVASRLGIASEAL 687

Query: 429 AKAGE 443
            K G+
Sbjct: 688 IKNGD 692


>ref|XP_002515477.1| WD-repeat protein, putative [Ricinus communis]
           gi|223545421|gb|EEF46926.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 1107

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/119 (47%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = +3

Query: 66  HHYNGGNVHFDMNKNQILAAGDQYHIKFWDMDNASLLDICNAEGGLPXXXXXXXXXXXXX 245
           H  + G V FD  KN+ LA GD Y +KFWDMDN ++L   +AEGGLP             
Sbjct: 578 HKRSLGVVQFDSTKNRFLAVGDDYSVKFWDMDNPNILTTIDAEGGLP------------- 624

Query: 246 XXXXXXXXXXCTPLINFNIEGNLLAVSTNDNRIKILATSDGMKLLHTV--HDLGASRIA 416
                      +P I FN EG LLAVS NDNRIKILAT DG+ L+ T   H L ASR++
Sbjct: 625 ----------ASPRIRFNKEGTLLAVSANDNRIKILATVDGLHLMRTFEGHSLIASRLS 673


>emb|CAN64663.1| hypothetical protein VITISV_035348 [Vitis vinifera]
          Length = 1129

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 58/124 (46%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = +3

Query: 81  GNVHFDMNKNQILAAGDQYHIKFWDMDNASLLDICNAEGGLPXXXXXXXXXXXXXXXXXX 260
           G V FD  KN+ L AGD+Y IKFWDMDN S+L   +A+GGLP                  
Sbjct: 607 GXVQFDTTKNRFLVAGDEYLIKFWDMDNVSMLMSTDADGGLP------------------ 648

Query: 261 XXXXXCTPLINFNIEGNLLAVSTNDNRIKILATSDGMKLLHTV----HDLGASRIAANSV 428
                 +P I FN EG LLAVSTN+N IKILA +DG++L+  +    HD  ASR A+ +V
Sbjct: 649 -----ASPCIRFNKEGTLLAVSTNENGIKILANADGVQLVRLIESRAHD--ASRSASGTV 701

Query: 429 AKAG 440
           AK G
Sbjct: 702 AKLG 705


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