BLASTX nr result

ID: Panax21_contig00009965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009965
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4...   140   2e-35
emb|CBI21098.3| unnamed protein product [Vitis vinifera]              139   4e-35
ref|XP_004145590.1| PREDICTED: aberrant root formation protein 4...   117   1e-28
ref|XP_003604590.1| Aberrant root formation protein [Medicago tr...   127   3e-27
ref|XP_002308578.1| predicted protein [Populus trichocarpa] gi|1...   122   1e-25

>ref|XP_002282976.2| PREDICTED: aberrant root formation protein 4-like [Vitis vinifera]
          Length = 668

 Score =  140 bits (353), Expect(2) = 2e-35
 Identities = 79/180 (43%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
 Frame = -1

Query: 976 LLNFVCLNT-FPKCLPFMLQLSQCVRYCHLSYLSLITGCDIDMITSIVLEGGLPLCHTLL 800
           +++ +C+      CL  +LQLS  + YC LSYL L+TGCD+D I  IVL+          
Sbjct: 299 IMSLLCMREKVSSCLTLVLQLSHFLPYCGLSYLGLLTGCDVDTIIDIVLK---------- 348

Query: 799 LRIYEMS*SISKIFKVKCFPIIVEFCLLNTFPKGSDDEDDYLSYFSYVKHGAALAVIWGQ 620
                           +C                ++D DDY+S F YVKHGA+LAVI G 
Sbjct: 349 ----------------EC----------------TEDGDDYISCFPYVKHGASLAVICGH 376

Query: 619 ISNKVSVATEADLDKFKYELQSSRTKRWQAVGMLKHLFSCVNLPWQLKKHAINFLLVIVE 440
           +SN V+ + E DL   K  LQS++TKRWQAVGMLKH+FS  NLPW+LKKH INFLL I++
Sbjct: 377 MSNMVAQSAEEDLTVLKDALQSNQTKRWQAVGMLKHIFSSANLPWELKKHTINFLLWIMD 436



 Score = 35.8 bits (81), Expect(2) = 2e-35
 Identities = 15/26 (57%), Positives = 22/26 (84%)
 Frame = -2

Query: 429 TFQSIQMVIIYASDRVLRKKAFDAFK 352
           + Q+I+MVI+Y SD VLR+ AF++FK
Sbjct: 460 SLQAIEMVIMYTSDSVLRRNAFNSFK 485


>emb|CBI21098.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  139 bits (350), Expect(2) = 4e-35
 Identities = 78/180 (43%), Positives = 100/180 (55%), Gaps = 1/180 (0%)
 Frame = -1

Query: 976 LLNFVCLNT-FPKCLPFMLQLSQCVRYCHLSYLSLITGCDIDMITSIVLEGGLPLCHTLL 800
           +++ +C+      CL  +LQLS  + YC LSYL L+TGCD+D I  IVL+          
Sbjct: 240 IMSLLCMREKVSSCLTLVLQLSHFLPYCGLSYLGLLTGCDVDTIIDIVLK---------- 289

Query: 799 LRIYEMS*SISKIFKVKCFPIIVEFCLLNTFPKGSDDEDDYLSYFSYVKHGAALAVIWGQ 620
                                              +D DDY+S F YVKHGA+LAVI G 
Sbjct: 290 -----------------------------------EDGDDYISCFPYVKHGASLAVICGH 314

Query: 619 ISNKVSVATEADLDKFKYELQSSRTKRWQAVGMLKHLFSCVNLPWQLKKHAINFLLVIVE 440
           +SN V+ + E DL   K  LQS++TKRWQAVGMLKH+FS  NLPW+LKKH INFLL I++
Sbjct: 315 MSNMVAQSAEEDLTVLKDALQSNQTKRWQAVGMLKHIFSSANLPWELKKHTINFLLWIMD 374



 Score = 35.8 bits (81), Expect(2) = 4e-35
 Identities = 15/26 (57%), Positives = 22/26 (84%)
 Frame = -2

Query: 429 TFQSIQMVIIYASDRVLRKKAFDAFK 352
           + Q+I+MVI+Y SD VLR+ AF++FK
Sbjct: 398 SLQAIEMVIMYTSDSVLRRNAFNSFK 423


>ref|XP_004145590.1| PREDICTED: aberrant root formation protein 4-like [Cucumis sativus]
          Length = 485

 Score =  117 bits (293), Expect(2) = 1e-28
 Identities = 68/165 (41%), Positives = 91/165 (55%)
 Frame = -1

Query: 940 CLPFMLQLSQCVRYCHLSYLSLITGCDIDMITSIVLEGGLPLCHTLLLRIYEMS*SISKI 761
           CLPF+ +LS  + +C LSY  LITG DID I+  ++ G   L H L L            
Sbjct: 123 CLPFISKLSSFLPFCGLSYAGLITGFDIDKISKNII-GVSFLVHFLYL------------ 169

Query: 760 FKVKCFPIIVEFCLLNTFPKGSDDEDDYLSYFSYVKHGAALAVIWGQISNKVSVATEADL 581
                                 +DEDDY + FSY+KHGA L+V+WG IS +V  A +  L
Sbjct: 170 ----------------------EDEDDYTACFSYIKHGACLSVLWGFISEEVVQAADEKL 207

Query: 580 DKFKYELQSSRTKRWQAVGMLKHLFSCVNLPWQLKKHAINFLLVI 446
           +  K EL S +T+RW+A+GM +H+ S   L W+LKKHAI+FLL I
Sbjct: 208 NVLKDELTSKQTERWKAIGMFRHILSFPALSWKLKKHAIDFLLCI 252



 Score = 36.2 bits (82), Expect(2) = 1e-28
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2

Query: 429 TFQSIQMVIIYASDRVLRKKAFDAFK 352
           TFQ++Q++I+YA D  LR+  FD FK
Sbjct: 280 TFQAVQIIIMYAPDATLRRNGFDLFK 305


>ref|XP_003604590.1| Aberrant root formation protein [Medicago truncatula]
           gi|355505645|gb|AES86787.1| Aberrant root formation
           protein [Medicago truncatula]
          Length = 564

 Score =  127 bits (320), Expect = 3e-27
 Identities = 70/174 (40%), Positives = 104/174 (59%)
 Frame = -1

Query: 952 TFPKCLPFMLQLSQCVRYCHLSYLSLITGCDIDMITSIVLEGGLPLCHTLLLRIYEMS*S 773
           T   C   +LQLS+   YC LSYLSL+T  D++++ S V  G      TL L++      
Sbjct: 144 TASSCHSLVLQLSRISSYCGLSYLSLVTTYDVEVVASAVFGGS-----TLRLKLLIYFDV 198

Query: 772 ISKIFKVKCFPIIVEFCLLNTFPKGSDDEDDYLSYFSYVKHGAALAVIWGQISNKVSVAT 593
            S    +  F I V +         ++++DDY+   S++KHG AL+VIWG +S +V+ A 
Sbjct: 199 YSGTVCLHNFLIHVNY---------AENKDDYMDCLSHIKHGCALSVIWGHVSEEVAHAA 249

Query: 592 EADLDKFKYELQSSRTKRWQAVGMLKHLFSCVNLPWQLKKHAINFLLVIVEAAV 431
           + D+   K EL++++ KRWQA+G LKH+ S V+LPW+LKKH INFLL I +  +
Sbjct: 250 KEDMTVVKDELRNNQIKRWQAIGTLKHVLSFVSLPWELKKHTINFLLCITDGDI 303


>ref|XP_002308578.1| predicted protein [Populus trichocarpa] gi|118483915|gb|ABK93847.1|
           unknown [Populus trichocarpa]
           gi|222854554|gb|EEE92101.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  122 bits (306), Expect = 1e-25
 Identities = 53/60 (88%), Positives = 57/60 (95%)
 Frame = -3

Query: 347 IPGRYDAMWKEIDYAKHLWKNRQELQVEDAGIAVLFGLECFAWYCAGEIVGRGFTFTGYY 168
           IP RY+A WKE+DYAKHLWK+RQEL+VEDAGIA LFGLECFAWYCAGEIVGRGFTFTGYY
Sbjct: 62  IPVRYEAFWKELDYAKHLWKHRQELKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGYY 121


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