BLASTX nr result

ID: Panax21_contig00009955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009955
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC16734.1| arabinogalactan protein [Daucus carota]               198   1e-48
ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like pro...   196   5e-48
emb|CBI29537.3| unnamed protein product [Vitis vinifera]              187   2e-45
gb|ABG91751.1| HyPRP1 [Gossypium hirsutum]                            167   2e-39
ref|XP_002509463.1| structural constituent of cell wall, putativ...   165   1e-38

>emb|CAC16734.1| arabinogalactan protein [Daucus carota]
          Length = 242

 Score =  198 bits (504), Expect = 1e-48
 Identities = 104/191 (54%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = -1

Query: 706 ADTPDKRPQPPSQETAKPPVQPAPSHAPTQPPSHAXXXXXXXXXXXXXXXXXXXXXXRKF 527
           A  P K P  P  +  KPPV+ APSHAPT  P+                         K 
Sbjct: 75  APAPVKPPVKPPVQPVKPPVK-APSHAPTPLPAR------------------------KL 109

Query: 526 VAVQGVVYCKDCKYLGINTLLKAKPLFGAVVQLQCNNTRNPLVVQTKTDKNGYFFISAPK 347
           VAVQGVVYCK C Y G+ TLL A PL GAVV+LQCNNT+ PLVVQ KTDKNGYF ++APK
Sbjct: 110 VAVQGVVYCKPCNYTGVETLLGATPLLGAVVKLQCNNTKYPLVVQGKTDKNGYFSLNAPK 169

Query: 346 TLTNYGSHKCKVSIVSSPLPTCNMPTNLHYGLLGAFLMPLNKPPISTH-PIGFDLFNVGP 170
           T+T YG HKC+V +VSSP   C+ PTNL YG+ GA L    KPP+ST  P  F++F+VGP
Sbjct: 170 TITTYGVHKCRVFVVSSPEKKCDKPTNLRYGVKGAILEKSTKPPVSTKTPATFEMFSVGP 229

Query: 169 FAFEPSSKEQC 137
           FAFEPS+K+ C
Sbjct: 230 FAFEPSTKKPC 240


>ref|XP_002274293.2| PREDICTED: pistil-specific extensin-like protein-like [Vitis
           vinifera]
          Length = 187

 Score =  196 bits (499), Expect = 5e-48
 Identities = 100/186 (53%), Positives = 116/186 (62%), Gaps = 3/186 (1%)
 Frame = -1

Query: 679 PPSQETAKPPVQP---APSHAPTQPPSHAXXXXXXXXXXXXXXXXXXXXXXRKFVAVQGV 509
           PP    + PP QP    PSH P  PP H                       R  VAVQGV
Sbjct: 3   PPVHVPSHPPTQPPVHVPSHPPVHPPMHPPTRPPVHAPGHPPAHPPIHFPPRSLVAVQGV 62

Query: 508 VYCKDCKYLGINTLLKAKPLFGAVVQLQCNNTRNPLVVQTKTDKNGYFFISAPKTLTNYG 329
           VYCK CKY GI+TLL A PL GA V+LQCNNT+ PLVV  KTDKNGYFFI APK +T +G
Sbjct: 63  VYCKACKYRGIDTLLGASPLLGATVKLQCNNTKYPLVVLGKTDKNGYFFIQAPKKITTFG 122

Query: 328 SHKCKVSIVSSPLPTCNMPTNLHYGLLGAFLMPLNKPPISTHPIGFDLFNVGPFAFEPSS 149
           +HKCKVS++SS  PTCN+ T+LH+GL GA L P  KPP    P  +  F+VGPFAFEP+ 
Sbjct: 123 AHKCKVSLISSSSPTCNLATDLHFGLKGAILRP-EKPPAGLPPPPYVTFSVGPFAFEPAK 181

Query: 148 KEQCQR 131
           K +C R
Sbjct: 182 KVECPR 187


>emb|CBI29537.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  187 bits (476), Expect = 2e-45
 Identities = 96/175 (54%), Positives = 113/175 (64%)
 Frame = -1

Query: 655 PPVQPAPSHAPTQPPSHAXXXXXXXXXXXXXXXXXXXXXXRKFVAVQGVVYCKDCKYLGI 476
           PP +P P HAP  PP+H                          VAVQGVVYCK CKY GI
Sbjct: 3   PPTRP-PVHAPGHPPAHPPIHFPPR----------------SLVAVQGVVYCKACKYRGI 45

Query: 475 NTLLKAKPLFGAVVQLQCNNTRNPLVVQTKTDKNGYFFISAPKTLTNYGSHKCKVSIVSS 296
           +TLL A PL GA V+LQCNNT+ PLVV  KTDKNGYFFI APK +T +G+HKCKVS++SS
Sbjct: 46  DTLLGASPLLGATVKLQCNNTKYPLVVLGKTDKNGYFFIQAPKKITTFGAHKCKVSLISS 105

Query: 295 PLPTCNMPTNLHYGLLGAFLMPLNKPPISTHPIGFDLFNVGPFAFEPSSKEQCQR 131
             PTCN+ T+LH+GL GA L P  KPP    P  +  F+VGPFAFEP+ K +C R
Sbjct: 106 SSPTCNLATDLHFGLKGAILRP-EKPPAGLPPPPYVTFSVGPFAFEPAKKVECPR 159


>gb|ABG91751.1| HyPRP1 [Gossypium hirsutum]
          Length = 326

 Score =  167 bits (424), Expect = 2e-39
 Identities = 86/182 (47%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
 Frame = -1

Query: 697 PDKRPQ-PPSQETAKPPVQPAPSHAPTQPPSHAXXXXXXXXXXXXXXXXXXXXXXRKFVA 521
           P K P  PP++    PP  P PS +P +PP++                          VA
Sbjct: 163 PTKPPTAPPTKPPVHPPTYPPPSPSPAKPPTYPKPQR-------------------SLVA 203

Query: 520 VQGVVYCKDCKYLGINTLLKAKPLFGAVVQLQCNNTRNPLVVQTKTDKNGYFFISAPKTL 341
           VQGVV+CK CKY G NTLL AKP+ GA V+L C NT+       KTDKNGYFF+ APKT+
Sbjct: 204 VQGVVFCKSCKYAGSNTLLGAKPILGATVKLTCKNTKYKQEATAKTDKNGYFFLQAPKTV 263

Query: 340 TNYGSHKCKVSIVSSPLPTCNMPTNLHYGLLGAFLMPLNKPPISTHPIGFDLFNVGPFAF 161
           T++G+HKC VS+VSSP+  C+ P+NLH GL GA L P  + P + + + F L+ VGPFAF
Sbjct: 264 TSFGAHKCTVSLVSSPMAKCSKPSNLHGGLKGATLRP--EKPFTANKLPFILYTVGPFAF 321

Query: 160 EP 155
           EP
Sbjct: 322 EP 323


>ref|XP_002509463.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223549362|gb|EEF50850.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 261

 Score =  165 bits (418), Expect = 1e-38
 Identities = 86/184 (46%), Positives = 108/184 (58%), Gaps = 2/184 (1%)
 Frame = -1

Query: 700 TPDKRPQPPSQETAKPPVQ--PAPSHAPTQPPSHAXXXXXXXXXXXXXXXXXXXXXXRKF 527
           +P   P P S     PPV   PA  H P +PP+ +                        F
Sbjct: 92  SPAHSPMPHSHAPVHPPVHSPPAQPHPPVKPPARSPSSHFPR----------------SF 135

Query: 526 VAVQGVVYCKDCKYLGINTLLKAKPLFGAVVQLQCNNTRNPLVVQTKTDKNGYFFISAPK 347
           VAVQGVVYCK CKY G++TLL A P+ GA V+LQCNNT+ P   +  TDKNGYF++ APK
Sbjct: 136 VAVQGVVYCKSCKYSGVDTLLGASPVLGATVKLQCNNTKYPQEAKATTDKNGYFYLQAPK 195

Query: 346 TLTNYGSHKCKVSIVSSPLPTCNMPTNLHYGLLGAFLMPLNKPPISTHPIGFDLFNVGPF 167
           ++TNYG+HKCKVS+VS+P   C+  T+LH GL G  L P  K     + + F L+ VGPF
Sbjct: 196 SITNYGAHKCKVSLVSAPNTACSKITDLHGGLSGGILRPQKK--FVANKLPFVLYTVGPF 253

Query: 166 AFEP 155
           AFEP
Sbjct: 254 AFEP 257


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