BLASTX nr result

ID: Panax21_contig00009954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009954
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa...   107   3e-21
ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ...   104   2e-20
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...   103   2e-20
ref|XP_003618612.1| hypothetical protein MTR_6g013690 [Medicago ...   103   4e-20

>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
           sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
           probable ubiquitin conjugation factor E4-like [Cucumis
           sativus]
          Length = 1043

 Score =  107 bits (266), Expect = 3e-21
 Identities = 52/63 (82%), Positives = 55/63 (87%)
 Frame = +2

Query: 188 NGRVIEMTSILGPFFHVSVLPDQTIFKSQPDVGQQCFAEATTRRPADLLSSFTTINHESS 367
           NGRVIEMTSILGPFFHVS LPD  IFKSQPDVGQQCF+EA+TRRPADLLSSFTTI    +
Sbjct: 251 NGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMN 310

Query: 368 YLY 376
            LY
Sbjct: 311 NLY 313


>ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|222867091|gb|EEF04222.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +2

Query: 185 LNGRVIEMTSILGPFFHVSVLPDQTIFKSQPDVGQQCFAEATTRRPADLLSSFTTINHES 364
           +NGRVIEMTSILGPFFHVS LPD TIFKS+PDVGQQCF++AT RR ADLLSSFTTI    
Sbjct: 243 VNGRVIEMTSILGPFFHVSALPDNTIFKSEPDVGQQCFSDATNRRQADLLSSFTTIKTLM 302

Query: 365 SYLY 376
           ++LY
Sbjct: 303 NHLY 306


>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 1031

 Score =  104 bits (259), Expect = 2e-20
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = +2

Query: 185 LNGRVIEMTSILGPFFHVSVLPDQTIFKSQPDVGQQCFAEATTRRPADLLSSFTTINHES 364
           LNGRVIEMTSILGPFFHVS LPD TIFKS+PDVGQQCF+E +TRRP+DLLSSF TI    
Sbjct: 245 LNGRVIEMTSILGPFFHVSALPDHTIFKSEPDVGQQCFSEVSTRRPSDLLSSFATIKTFM 304

Query: 365 SYLY 376
           + LY
Sbjct: 305 NNLY 308


>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
           vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
           product [Vitis vinifera]
          Length = 1037

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +2

Query: 185 LNGRVIEMTSILGPFFHVSVLPDQTIFKSQPDVGQQCFAEATTRRPADLLSSFTTINHES 364
           +NGRVIEMTSILGPFFHVS LPD+ IF+ QPDVGQQCF+EA+TRRPADLLSSFTTI    
Sbjct: 244 MNGRVIEMTSILGPFFHVSALPDRGIFQGQPDVGQQCFSEASTRRPADLLSSFTTIKTVM 303

Query: 365 SYLY 376
           + LY
Sbjct: 304 NGLY 307


>ref|XP_003618612.1| hypothetical protein MTR_6g013690 [Medicago truncatula]
           gi|355493627|gb|AES74830.1| hypothetical protein
           MTR_6g013690 [Medicago truncatula]
          Length = 746

 Score =  103 bits (256), Expect = 4e-20
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = +2

Query: 185 LNGRVIEMTSILGPFFHVSVLPDQTIFKSQPDVGQQCFAEATTRRPADLLSSFTTINHES 364
           +NGR IEMTSILGPFFHVS LPDQ  FKS PD+GQQCF++A+TRRPADLLSSFTTI    
Sbjct: 1   MNGRAIEMTSILGPFFHVSALPDQNFFKSSPDIGQQCFSDASTRRPADLLSSFTTIKTVM 60

Query: 365 SYLY 376
           + LY
Sbjct: 61  NTLY 64


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