BLASTX nr result

ID: Panax21_contig00009934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009934
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2...   337   3e-90
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              334   1e-89
ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   334   1e-89
ref|XP_002322827.1| predicted protein [Populus trichocarpa] gi|2...   331   1e-88
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   330   2e-88

>ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  337 bits (863), Expect = 3e-90
 Identities = 165/223 (73%), Positives = 187/223 (83%)
 Frame = -3

Query: 670 ASDSADPQKGHDGXXXXXXXXXXXXXEKKHAELLALPPHGSEVYLGGIPQDVSEDDLKGF 491
           ASD AD  KG DG              +KH+ELLALPPHGSEVYLGGIP D SE+DLK F
Sbjct: 35  ASDEADSPKGSDGDEEEDEH-------RKHSELLALPPHGSEVYLGGIPPDASEEDLKEF 87

Query: 490 CESIGEVTEVRIMKGKDSSENKGYAFVTFRTKELASQAIKELHNAELKGRKLRCSTSQAK 311
           CESIGEVTE+RIMKGKDSSE+KGYAFVTFRTKELAS+AI+EL+N E KG+K++CSTSQA 
Sbjct: 88  CESIGEVTEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQAN 147

Query: 310 HKLFIGNIPKSWGKEDINKVVTKIGPGVSAVELLKDPLNSSRNRGFVFIEYYNHACADYS 131
           H+LFIGN+P++WG+ED+ K V K GPGV++VELLKDP N SRNRGF FIEYYNHACA+YS
Sbjct: 148 HRLFIGNVPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYS 207

Query: 130 RQKMLIPKFKLGDNAPTVSWADPKNAESSAASQVKAVYVKNLP 2
           R+ M  P+FKL DNAPTVSWADPKNA SSAASQVKAVYVKNLP
Sbjct: 208 RKMMSSPEFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLP 250


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  334 bits (857), Expect = 1e-89
 Identities = 159/196 (81%), Positives = 180/196 (91%)
 Frame = -3

Query: 589 KKHAELLALPPHGSEVYLGGIPQDVSEDDLKGFCESIGEVTEVRIMKGKDSSENKGYAFV 410
           KKHAELLALPPHGSEVY+GGI QD SE+DLK FCES+GEVTEVRIMKGKDS ENKG+AFV
Sbjct: 42  KKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGENKGFAFV 101

Query: 409 TFRTKELASQAIKELHNAELKGRKLRCSTSQAKHKLFIGNIPKSWGKEDINKVVTKIGPG 230
           TFR  ELAS+AI+EL+N E KGRK++CSTSQAKH+LFIGN+P+SWG+EDI KVVT+IGPG
Sbjct: 102 TFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVVTEIGPG 161

Query: 229 VSAVELLKDPLNSSRNRGFVFIEYYNHACADYSRQKMLIPKFKLGDNAPTVSWADPKNAE 50
           V+AVEL+KD  NSS NRGF FI+YYNHACA+YSRQKM+ PKFKL +NAPTVSWADPKNA+
Sbjct: 162 VTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSWADPKNAD 221

Query: 49  SSAASQVKAVYVKNLP 2
           SS ASQVKAVYVKNLP
Sbjct: 222 SSPASQVKAVYVKNLP 237


>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
           vinifera]
          Length = 503

 Score =  334 bits (857), Expect = 1e-89
 Identities = 159/196 (81%), Positives = 180/196 (91%)
 Frame = -3

Query: 589 KKHAELLALPPHGSEVYLGGIPQDVSEDDLKGFCESIGEVTEVRIMKGKDSSENKGYAFV 410
           KKHAELLALPPHGSEVY+GGI QD SE+DLK FCES+GEVTEVRIMKGKDS ENKG+AFV
Sbjct: 111 KKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGENKGFAFV 170

Query: 409 TFRTKELASQAIKELHNAELKGRKLRCSTSQAKHKLFIGNIPKSWGKEDINKVVTKIGPG 230
           TFR  ELAS+AI+EL+N E KGRK++CSTSQAKH+LFIGN+P+SWG+EDI KVVT+IGPG
Sbjct: 171 TFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVVTEIGPG 230

Query: 229 VSAVELLKDPLNSSRNRGFVFIEYYNHACADYSRQKMLIPKFKLGDNAPTVSWADPKNAE 50
           V+AVEL+KD  NSS NRGF FI+YYNHACA+YSRQKM+ PKFKL +NAPTVSWADPKNA+
Sbjct: 231 VTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSWADPKNAD 290

Query: 49  SSAASQVKAVYVKNLP 2
           SS ASQVKAVYVKNLP
Sbjct: 291 SSPASQVKAVYVKNLP 306


>ref|XP_002322827.1| predicted protein [Populus trichocarpa] gi|222867457|gb|EEF04588.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  331 bits (849), Expect = 1e-88
 Identities = 166/227 (73%), Positives = 189/227 (83%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 ASDSADPQKGHDGXXXXXXXXXXXXXEKKHAELLALPPHGSEVYLGGIPQDVSEDDLKGF 491
           A+D AD +KG DG              +KHAELLALPPHGSEVYLGGIP D SE DLK F
Sbjct: 56  AADEADSKKGSDGEEEIDEQ-------RKHAELLALPPHGSEVYLGGIPPDASEGDLKEF 108

Query: 490 CESIGEVTEVRIMKGKDSSENKGYAFVTFRTKELASQAIKELHNAELKGRKLRCSTSQAK 311
           CESIGEVTEVRIMKGKDSSE+KGYAFV+FRTKELAS+AI+EL+N E KG+K++CSTSQA 
Sbjct: 109 CESIGEVTEVRIMKGKDSSESKGYAFVSFRTKELASKAIEELNNTEFKGKKVKCSTSQAN 168

Query: 310 HKLFIGNIPKSWGKEDINKVVTKIGPGVSAVELLKDPLNSSRNRGFVFIEYYNHACADYS 131
           H+LFIGN+P++WG+E++ K V KIGPGV++VELLKDP N SRNRGF FIEYYNHACA+YS
Sbjct: 169 HRLFIGNVPRNWGEENMKKAVKKIGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYS 228

Query: 130 RQKMLIPKFKLGDNAPTVSWADPKNAESSAASQ----VKAVYVKNLP 2
           R+KM  P+FKL DNAPTVSWADPKNA SSAASQ    VKAVYVKNLP
Sbjct: 229 RKKMSNPEFKLDDNAPTVSWADPKNAGSSAASQVCCSVKAVYVKNLP 275


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  330 bits (847), Expect = 2e-88
 Identities = 155/196 (79%), Positives = 182/196 (92%)
 Frame = -3

Query: 589  KKHAELLALPPHGSEVYLGGIPQDVSEDDLKGFCESIGEVTEVRIMKGKDSSENKGYAFV 410
            KKHAELLALPPHGSEVY+GGIPQD SEDDL+ FCESIGEVTEVR+M+ K+S+ENKG+AFV
Sbjct: 426  KKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFV 485

Query: 409  TFRTKELASQAIKELHNAELKGRKLRCSTSQAKHKLFIGNIPKSWGKEDINKVVTKIGPG 230
            TFR+ ELAS+AI EL+N E KG+K++CS+SQAKH+LFIGN+P+SWG+ED+ KVVT+IGPG
Sbjct: 486  TFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPG 545

Query: 229  VSAVELLKDPLNSSRNRGFVFIEYYNHACADYSRQKMLIPKFKLGDNAPTVSWADPKNAE 50
            V+AVEL+KD  N+S NRGF FI+YYNHACA+YSRQKM+ PKFKL DNAPTVSWADPKNA+
Sbjct: 546  VTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNAD 605

Query: 49   SSAASQVKAVYVKNLP 2
            SSAASQVKAVYVKNLP
Sbjct: 606  SSAASQVKAVYVKNLP 621


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