BLASTX nr result

ID: Panax21_contig00009929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009929
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304394.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-18
ref|XP_001775866.1| predicted protein [Physcomitrella patens sub...    59   7e-14
ref|XP_002519892.1| clathrin binding protein, putative [Ricinus ...    79   5e-13
ref|XP_003631526.1| PREDICTED: uncharacterized protein LOC100249...    78   7e-13
ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249...    78   7e-13

>ref|XP_002304394.1| predicted protein [Populus trichocarpa] gi|222841826|gb|EEE79373.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 62.8 bits (151), Expect(2) = 3e-18
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = +3

Query: 147 LEDARHLTHRYERLRQEV---CSDN*SN*ASSKMQRSFCRQCIKLKNAEARLTEHRASMA 317
           LEDAR LTH +++LRQ V    ++     + ++        C KL+ AEARL E ++++ 
Sbjct: 145 LEDARRLTHHHDKLRQAVEVQAAEVLRCRSKTRDSEISAESCTKLRAAEARLAELKSTVM 204

Query: 318 VLQREATAAMLSVEDQQQQLT 380
            L REATAAM SVE+QQQQ+T
Sbjct: 205 SLGREATAAMSSVENQQQQIT 225



 Score = 53.9 bits (128), Expect(2) = 3e-18
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +1

Query: 1   QSGGSPLARAALQFGTAHGSIENEKKTMLRIFDDQVSEPPRLSITGAP 144
           Q   + +ARA LQFG +H  +ENEK+T++ + +DQVS+P R  ITGAP
Sbjct: 97  QKENNYVARAVLQFGASHNLMENEKETLVGVLNDQVSKPLRALITGAP 144


>ref|XP_001775866.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672873|gb|EDQ59405.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 364

 Score = 58.5 bits (140), Expect(2) = 7e-14
 Identities = 35/78 (44%), Positives = 46/78 (58%)
 Frame = +3

Query: 147 LEDARHLTHRYERLRQEVCSDN*SN*ASSKMQRSFCRQCIKLKNAEARLTEHRASMAVLQ 326
           LEDAR LT RY+RLRQE  +                   +KL+ AE ++ E  +SMAVL 
Sbjct: 146 LEDARQLTQRYDRLRQEAETQASEVSKRRTKDAGGLENVVKLQVAETKMQELSSSMAVLG 205

Query: 327 REATAAMLSVEDQQQQLT 380
           +EA +AM +VE QQQ+LT
Sbjct: 206 KEAASAMTAVEAQQQRLT 223



 Score = 43.1 bits (100), Expect(2) = 7e-14
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +1

Query: 10  GSPLARAALQFGTAHGSIENEKKTMLRIFDDQVSEPPRLSITGAP 144
           G  L++A+LQ+GTA   +E E+ +M R+   QV++P R  + GAP
Sbjct: 101 GGALSKASLQYGTAKIQMEKERDSMHRVLSTQVADPLRAMVNGAP 145


>ref|XP_002519892.1| clathrin binding protein, putative [Ricinus communis]
           gi|223540938|gb|EEF42496.1| clathrin binding protein,
           putative [Ricinus communis]
          Length = 368

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
 Frame = +3

Query: 147 LEDARHLTHRYERLRQEVCSDN*SN*ASSKMQRSFCRQ-------CIKLKNAEARLTEHR 305
           LEDARHLTHRYE+LRQEV +      A    +RS  R+       C++L++AE RLTE +
Sbjct: 145 LEDARHLTHRYEKLRQEVEAQG----AEVLRRRSKTRESDISAENCMRLRSAETRLTELK 200

Query: 306 ASMAVLQREATAAMLSVEDQQQQLT 380
           ++M  L +EAT+AMLSVE+QQQQ+T
Sbjct: 201 STMMALGKEATSAMLSVENQQQQIT 225


>ref|XP_003631526.1| PREDICTED: uncharacterized protein LOC100249391 isoform 2 [Vitis
           vinifera]
          Length = 350

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
 Frame = +3

Query: 147 LEDARHLTHRYERLRQEV---CSDN*SN*ASSKMQRSFCRQCIKLKNAEARLTEHRASMA 317
           LEDARHLTHRYERLRQEV    +D     A  +   +     IKL++AEA+L+E +++M 
Sbjct: 121 LEDARHLTHRYERLRQEVESQAADVLRRQAKFRDPATSAESSIKLQSAEAKLSELKSAMM 180

Query: 318 VLQREATAAMLSVEDQQQQLTSKSFL 395
            L REATAAMLSVE QQQ++T +  L
Sbjct: 181 ALGREATAAMLSVEAQQQRITFQRLL 206



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   QSGGSPLARAALQFGTAHGSIENEKKTMLRIFDDQVSEPPRLSITGAPY--WRMLVT*LI 174
           QS GSPLARAAL FG +H S+E E++T+L +F DQVSEP R+ ITGAP    R L     
Sbjct: 73  QSTGSPLARAALYFGNSHSSMEKERETLLGVFCDQVSEPLRVLITGAPLEDARHLTHRYE 132

Query: 175 VMRDYGKRFAQTTEVIRRQARCKDPSVDSA*NLKMQKQD 291
            +R   +  +Q  +V+RRQA+ +DP+  +  ++K+Q  +
Sbjct: 133 RLRQEVE--SQAADVLRRQAKFRDPATSAESSIKLQSAE 169


>ref|XP_002267588.1| PREDICTED: uncharacterized protein LOC100249391 isoform 1 [Vitis
           vinifera] gi|296085501|emb|CBI29233.3| unnamed protein
           product [Vitis vinifera]
          Length = 371

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
 Frame = +3

Query: 147 LEDARHLTHRYERLRQEV---CSDN*SN*ASSKMQRSFCRQCIKLKNAEARLTEHRASMA 317
           LEDARHLTHRYERLRQEV    +D     A  +   +     IKL++AEA+L+E +++M 
Sbjct: 142 LEDARHLTHRYERLRQEVESQAADVLRRQAKFRDPATSAESSIKLQSAEAKLSELKSAMM 201

Query: 318 VLQREATAAMLSVEDQQQQLTSKSFL 395
            L REATAAMLSVE QQQ++T +  L
Sbjct: 202 ALGREATAAMLSVEAQQQRITFQRLL 227



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   QSGGSPLARAALQFGTAHGSIENEKKTMLRIFDDQVSEPPRLSITGAPY--WRMLVT*LI 174
           QS GSPLARAAL FG +H S+E E++T+L +F DQVSEP R+ ITGAP    R L     
Sbjct: 94  QSTGSPLARAALYFGNSHSSMEKERETLLGVFCDQVSEPLRVLITGAPLEDARHLTHRYE 153

Query: 175 VMRDYGKRFAQTTEVIRRQARCKDPSVDSA*NLKMQKQD 291
            +R   +  +Q  +V+RRQA+ +DP+  +  ++K+Q  +
Sbjct: 154 RLRQEVE--SQAADVLRRQAKFRDPATSAESSIKLQSAE 190


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