BLASTX nr result

ID: Panax21_contig00009927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009927
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275712.2| PREDICTED: RING finger protein 10-like [Viti...   127   3e-27
emb|CBI21277.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_002320428.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glyc...   110   3e-22
ref|XP_002512841.1| conserved hypothetical protein [Ricinus comm...   109   6e-22

>ref|XP_002275712.2| PREDICTED: RING finger protein 10-like [Vitis vinifera]
          Length = 765

 Score =  127 bits (318), Expect = 3e-27
 Identities = 75/142 (52%), Positives = 93/142 (65%), Gaps = 9/142 (6%)
 Frame = +2

Query: 2    EEKIKAEVAAATEYVSMPFNFAQSHDFSPTFSMDDFEALGXXXXXXXXXXXXGDRPLFSN 181
            +EK+KAE A  T+ + +P  F + + + PTFS+DDFEALG            G+R LFSN
Sbjct: 621  KEKLKAE-ATTTDSLPIPSRFGE-YVYPPTFSIDDFEALGSPVVTSTSPPTFGERKLFSN 678

Query: 182  VTRMGFAAAHDSPAWKIEEAHILPKTDVASNSSSV-----SGTPSFANVISRAKPVE--- 337
            VT++GFAA HDSP  KIEE H +  T +AS+SS V     +GTPSFANVISR K VE   
Sbjct: 679  VTKLGFAAGHDSPGLKIEEVHSVHSTSMASDSSGVTGSRNAGTPSFANVISRGKSVESLD 738

Query: 338  -SKPTEIGKKGKKPNRVLLSTA 400
             SK    GKKGKK N++LLSTA
Sbjct: 739  ASKTIGTGKKGKKSNQILLSTA 760


>emb|CBI21277.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  127 bits (318), Expect = 3e-27
 Identities = 75/142 (52%), Positives = 93/142 (65%), Gaps = 9/142 (6%)
 Frame = +2

Query: 2   EEKIKAEVAAATEYVSMPFNFAQSHDFSPTFSMDDFEALGXXXXXXXXXXXXGDRPLFSN 181
           +EK+KAE A  T+ + +P  F + + + PTFS+DDFEALG            G+R LFSN
Sbjct: 541 KEKLKAE-ATTTDSLPIPSRFGE-YVYPPTFSIDDFEALGSPVVTSTSPPTFGERKLFSN 598

Query: 182 VTRMGFAAAHDSPAWKIEEAHILPKTDVASNSSSV-----SGTPSFANVISRAKPVE--- 337
           VT++GFAA HDSP  KIEE H +  T +AS+SS V     +GTPSFANVISR K VE   
Sbjct: 599 VTKLGFAAGHDSPGLKIEEVHSVHSTSMASDSSGVTGSRNAGTPSFANVISRGKSVESLD 658

Query: 338 -SKPTEIGKKGKKPNRVLLSTA 400
            SK    GKKGKK N++LLSTA
Sbjct: 659 ASKTIGTGKKGKKSNQILLSTA 680


>ref|XP_002320428.1| predicted protein [Populus trichocarpa] gi|222861201|gb|EEE98743.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  115 bits (287), Expect = 1e-23
 Identities = 72/141 (51%), Positives = 86/141 (60%), Gaps = 9/141 (6%)
 Frame = +2

Query: 2   EEKIKAEVAAATEYVSMPFNFAQSHDFSPTFSMDDFEALGXXXXXXXXXXXXGDRPLFSN 181
           +EKIKAE +A+    ++P     S+D SP FSM+DFEALG            G+R LFSN
Sbjct: 478 KEKIKAEASASMP--TLPSFGQSSYDTSPNFSMEDFEALGISSSMSSSPPVAGERILFSN 535

Query: 182 VTRMGFAAAHDSPAWKIEEAHILPKTDVASNSSSV-----SGTPSFANVISRAKPVES-- 340
           V R GFAA HDSPA KIEE   L      +NSS++     SG  SFANV +R KP E+  
Sbjct: 536 VARFGFAAGHDSPALKIEENVPLQNNMPGNNSSNLNGSSNSGPSSFANVTARPKPEENVD 595

Query: 341 --KPTEIGKKGKKPNRVLLST 397
             K  E+ KKGKKPNRVLLST
Sbjct: 596 PPKMNEVSKKGKKPNRVLLST 616


>ref|XP_003548496.1| PREDICTED: RING finger protein 10-like [Glycine max]
          Length = 838

 Score =  110 bits (275), Expect = 3e-22
 Identities = 74/143 (51%), Positives = 89/143 (62%), Gaps = 10/143 (6%)
 Frame = +2

Query: 2    EEKIKAEVAAATEY-VSMPFNFAQSHDFSPTFSMDDFEALGXXXXXXXXXXXXGDRPLFS 178
            +EKIKAE  AA    +S+   F  S D  PTFSMDDFEALG            G+R  FS
Sbjct: 693  KEKIKAEATAAYSLPISLSHQFT-SRDDPPTFSMDDFEALGNSTISSSPPLA-GERKSFS 750

Query: 179  NVTRMGFAAAHDSPAWKIEEAHILPKTDVASNSSSVSG-----TPSFANVISRAKPVES- 340
            NVTR+GFAAAHDSP+ +I+E   L   +  S+SS  +G     T S++NVISRA+   S 
Sbjct: 751  NVTRLGFAAAHDSPSLQIQETSGLHNNNRTSDSSVSTGLRNGETQSYSNVISRAESNISS 810

Query: 341  ---KPTEIGKKGKKPNRVLLSTA 400
               K  E+GKKGKKPNRVLLSTA
Sbjct: 811  NAPKTNELGKKGKKPNRVLLSTA 833


>ref|XP_002512841.1| conserved hypothetical protein [Ricinus communis]
            gi|223547852|gb|EEF49344.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 746

 Score =  109 bits (272), Expect = 6e-22
 Identities = 72/148 (48%), Positives = 86/148 (58%), Gaps = 15/148 (10%)
 Frame = +2

Query: 2    EEKIKAEVAAATEYVSMPFNFAQSHDFSPTFSMDDFEALGXXXXXXXXXXXX------GD 163
            +EKIKAE AA  + +      +  +D SP FSMDDFEALG                  G+
Sbjct: 595  KEKIKAEAAAHPDSILSGSGHSFLND-SPKFSMDDFEALGSSTAMPSSPPMSSSPPVVGE 653

Query: 164  RPLFSNVTRMGFAAAHDSPAWKIEEAHILPKTDVASNSSSVS-----GTPSFANVISRAK 328
            + LFSNVTR+GFAA HDSP  KIEE   L    V ++S+ VS     GTP+FAN+ SR  
Sbjct: 654  KILFSNVTRLGFAAGHDSPTLKIEETSALHSNKVTNDSTGVSGTRNTGTPTFANITSRMN 713

Query: 329  PVE----SKPTEIGKKGKKPNRVLLSTA 400
              E    SK  EIGKKGKK NRVL+STA
Sbjct: 714  SGENLNVSKMNEIGKKGKKQNRVLMSTA 741


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