BLASTX nr result

ID: Panax21_contig00009886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009886
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containin...   113   1e-23
ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [...   113   1e-23
ref|XP_003538870.1| PREDICTED: uncharacterized protein LOC100800...   112   2e-23
ref|XP_002533810.1| nuclear receptor binding set domain containi...   112   2e-23

>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
           predicted protein [Populus trichocarpa]
          Length = 1256

 Score =  114 bits (284), Expect = 1e-23
 Identities = 46/48 (95%), Positives = 48/48 (100%)
 Frame = -3

Query: 457 CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFQSKARWNCGWHICS 314
           CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFF+SKA+WNCGWHICS
Sbjct: 36  CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFRSKAKWNCGWHICS 83



 Score =  111 bits (278), Expect = 5e-23
 Identities = 44/54 (81%), Positives = 50/54 (92%)
 Frame = -2

Query: 176 WHICSVCQKSAHYMCYTCTYSLCKGCTKDADYLCVRGDKGFCITCMKTVMLFEN 15
           WHICS CQ+++HYMCYTC YSLCKGCTKDADYLCVRG+KGFC TCM+T+ML EN
Sbjct: 79  WHICSSCQRASHYMCYTCPYSLCKGCTKDADYLCVRGNKGFCGTCMRTIMLIEN 132


>ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Glycine max]
          Length = 1365

 Score =  113 bits (283), Expect = 1e-23
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = -3

Query: 457 CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFQSKARWNCGWHICSV 311
           CFICFDGGSLVLCDRRGCPKAYHPACIKRDE FF+SKA+WNCGWHICSV
Sbjct: 88  CFICFDGGSLVLCDRRGCPKAYHPACIKRDEEFFRSKAKWNCGWHICSV 136



 Score =  108 bits (269), Expect = 6e-22
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -2

Query: 176 WHICSVCQKSAHYMCYTCTYSLCKGCTKDADYLCVRGDKGFCITCMKTVMLFENKEQG 3
           WHICSVCQKS+ YMCYTCTYSLCKGCTKDAD++C+R +KG C  CM+T+M+ EN  QG
Sbjct: 131 WHICSVCQKSSQYMCYTCTYSLCKGCTKDADFVCIRDNKGLCGICMRTIMMIENSAQG 188


>ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355513454|gb|AES95077.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1255

 Score =  113 bits (283), Expect = 1e-23
 Identities = 45/48 (93%), Positives = 48/48 (100%)
 Frame = -3

Query: 457 CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFQSKARWNCGWHICS 314
           CFICFDGGSLVLCDRRGCPKAYHPAC+KRDEAFF+SKA+WNCGWHICS
Sbjct: 100 CFICFDGGSLVLCDRRGCPKAYHPACVKRDEAFFRSKAKWNCGWHICS 147



 Score =  100 bits (249), Expect = 1e-19
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = -2

Query: 176 WHICSVCQKSAHYMCYTCTYSLCKGCTKDADYLCVRGDKGFCITCMKTVMLFENKEQG 3
           WHICS CQK++HYMCYTCTYSLCKGC K+AD++ VRG+KG C  C KT+ML EN   G
Sbjct: 143 WHICSSCQKASHYMCYTCTYSLCKGCIKNADFVSVRGNKGLCGICKKTIMLIENSAHG 200


>ref|XP_003538870.1| PREDICTED: uncharacterized protein LOC100800608 [Glycine max]
          Length = 655

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/48 (93%), Positives = 48/48 (100%)
 Frame = -3

Query: 457 CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFQSKARWNCGWHICS 314
           CFICFDGGSLVLCDRRGCPKAYHP+CIKRDEAFF+SKA+WNCGWHICS
Sbjct: 82  CFICFDGGSLVLCDRRGCPKAYHPSCIKRDEAFFRSKAKWNCGWHICS 129



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = -2

Query: 176 WHICSVCQKSAHYMCYTCTYSLCKGCTKDADYLCVRGDKGFCITCMKTVMLFENKEQG 3
           WHICS C K +HY+CYTCTYSLCKGCTK AD++ +R +KG C  C KT+ML EN  QG
Sbjct: 125 WHICSTCGKGSHYLCYTCTYSLCKGCTKKADFVSIRENKGLCGMCKKTIMLIENCAQG 182


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
           putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
           nuclear receptor binding set domain containing protein
           1, nsd, putative [Ricinus communis]
          Length = 1586

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/48 (93%), Positives = 48/48 (100%)
 Frame = -3

Query: 457 CFICFDGGSLVLCDRRGCPKAYHPACIKRDEAFFQSKARWNCGWHICS 314
           CFICFDGGSLVLCDRRGCPKAYHPACIKRDE+FF+SKA+WNCGWHICS
Sbjct: 133 CFICFDGGSLVLCDRRGCPKAYHPACIKRDESFFRSKAKWNCGWHICS 180



 Score =  111 bits (278), Expect = 5e-23
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = -2

Query: 176 WHICSVCQKSAHYMCYTCTYSLCKGCTKDADYLCVRGDKGFCITCMKTVMLFENKEQG 3
           WHICS CQK++HYMCYTCTYSLCKGCTKDADY+CVRG+KG C TCM+T+ML EN   G
Sbjct: 176 WHICSNCQKASHYMCYTCTYSLCKGCTKDADYVCVRGNKGLCGTCMRTIMLIENVTVG 233


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