BLASTX nr result

ID: Panax21_contig00009879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009879
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26772.3| unnamed protein product [Vitis vinifera]              359   5e-97
ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262...   359   5e-97
ref|XP_002311555.1| predicted protein [Populus trichocarpa] gi|2...   349   4e-94
gb|ABK95103.1| unknown [Populus trichocarpa]                          347   2e-93
gb|ADL36651.1| C3HL domain class transcription factor [Malus x d...   343   3e-92

>emb|CBI26772.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  359 bits (921), Expect = 5e-97
 Identities = 170/192 (88%), Positives = 176/192 (91%), Gaps = 7/192 (3%)
 Frame = -3

Query: 568 MLENINTTASTGPSSSSD-------GICNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 410
           MLEN    AST PSSSSD       G+CNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV
Sbjct: 1   MLEN-TAAASTAPSSSSDAFTSLENGVCNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 59

Query: 409 CEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPEERKRVFVCPEPSCLHHDPCHALGDLV 230
           CEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+ E +KRVFVCPEPSCLHHDP HALGDLV
Sbjct: 60  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLV 119

Query: 229 GIKKHFRRKHSNNKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 50
           GIKKHFRRKHSN+KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 120 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 179

Query: 49  QDACTIRQVRPD 14
           QDAC +RQVRP+
Sbjct: 180 QDACAVRQVRPE 191


>ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262958 [Vitis vinifera]
           gi|147787378|emb|CAN60092.1| hypothetical protein
           VITISV_033421 [Vitis vinifera]
          Length = 425

 Score =  359 bits (921), Expect = 5e-97
 Identities = 170/192 (88%), Positives = 176/192 (91%), Gaps = 7/192 (3%)
 Frame = -3

Query: 568 MLENINTTASTGPSSSSD-------GICNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 410
           MLEN    AST PSSSSD       G+CNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV
Sbjct: 1   MLEN-TAAASTAPSSSSDAFTSLENGVCNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYV 59

Query: 409 CEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPEERKRVFVCPEPSCLHHDPCHALGDLV 230
           CEICNQGFQRDQNLQMHRRRHKVPWKLLKRE+ E +KRVFVCPEPSCLHHDP HALGDLV
Sbjct: 60  CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLV 119

Query: 229 GIKKHFRRKHSNNKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 50
           GIKKHFRRKHSN+KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH
Sbjct: 120 GIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEH 179

Query: 49  QDACTIRQVRPD 14
           QDAC +RQVRP+
Sbjct: 180 QDACAVRQVRPE 191


>ref|XP_002311555.1| predicted protein [Populus trichocarpa] gi|222851375|gb|EEE88922.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  349 bits (896), Expect = 4e-94
 Identities = 164/192 (85%), Positives = 175/192 (91%), Gaps = 8/192 (4%)
 Frame = -3

Query: 553 NTTASTGPSSSSD--------GICNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEIC 398
           +TT ST PS SSD        G+ NKRKR+PAGTPDPDAEVVSLSP+TLLESDRYVCEIC
Sbjct: 4   STTTSTAPSPSSDPFTTSLDNGVTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEIC 63

Query: 397 NQGFQRDQNLQMHRRRHKVPWKLLKRESPEERKRVFVCPEPSCLHHDPCHALGDLVGIKK 218
           NQGFQRDQNLQMHRRRHKVPWKLLKRE+ E +KRV+VCPEPSCLHHDPCHALGDLVGIKK
Sbjct: 64  NQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPCHALGDLVGIKK 123

Query: 217 HFRRKHSNNKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 38
           HFRRKHSN+KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC
Sbjct: 124 HFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 183

Query: 37  TIRQVRPDHLQA 2
           T+R  +P+ LQA
Sbjct: 184 TVRGAQPE-LQA 194


>gb|ABK95103.1| unknown [Populus trichocarpa]
          Length = 422

 Score =  347 bits (890), Expect = 2e-93
 Identities = 165/197 (83%), Positives = 179/197 (90%), Gaps = 8/197 (4%)
 Frame = -3

Query: 568 MLENINTTASTGPSSSSD--------GICNKRKRRPAGTPDPDAEVVSLSPKTLLESDRY 413
           ML++I T  ST PS SSD        G+ NKRKR+PAGTPDPDAEVVSLSP+TLLESDRY
Sbjct: 1   MLDSITT--STAPSPSSDPFTSSLDNGLTNKRKRKPAGTPDPDAEVVSLSPRTLLESDRY 58

Query: 412 VCEICNQGFQRDQNLQMHRRRHKVPWKLLKRESPEERKRVFVCPEPSCLHHDPCHALGDL 233
           VCEIC+QGFQRDQNLQMHRRRHKVPWKLLKRE+ E +KRV+VCPEPSCLHHDPCHALGDL
Sbjct: 59  VCEICSQGFQRDQNLQMHRRRHKVPWKLLKRETQEVKKRVYVCPEPSCLHHDPCHALGDL 118

Query: 232 VGIKKHFRRKHSNNKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 53
           VGIKKHFRRKHSN+KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE
Sbjct: 119 VGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIE 178

Query: 52  HQDACTIRQVRPDHLQA 2
           HQDACT+R+ +P+ LQA
Sbjct: 179 HQDACTVRRAQPE-LQA 194


>gb|ADL36651.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 503

 Score =  343 bits (880), Expect = 3e-92
 Identities = 159/185 (85%), Positives = 170/185 (91%), Gaps = 5/185 (2%)
 Frame = -3

Query: 553 NTTASTGPSSS-----SDGICNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQG 389
           N ++S+ PSS       +G  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRY+CEICNQG
Sbjct: 4   NNSSSSVPSSDPFSCLENGHTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICEICNQG 63

Query: 388 FQRDQNLQMHRRRHKVPWKLLKRESPEERKRVFVCPEPSCLHHDPCHALGDLVGIKKHFR 209
           FQRDQNLQMHRRRHKVPWKLLKRESP  +KRVFVCPEPSCLHHDPCHALGDLVGIKKHFR
Sbjct: 64  FQRDQNLQMHRRRHKVPWKLLKRESPVVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFR 123

Query: 208 RKHSNNKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTIR 29
           RKHSN+KQWVC+KCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC + 
Sbjct: 124 RKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMD 183

Query: 28  QVRPD 14
           +VRP+
Sbjct: 184 RVRPE 188


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