BLASTX nr result

ID: Panax21_contig00009873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009873
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552152.1| PREDICTED: probable pectate lyase 8-like [Gl...   168   1e-39
ref|XP_003622996.1| Pectate lyase 1-27 [Medicago truncatula] gi|...   167   2e-39
ref|XP_003530885.1| PREDICTED: probable pectate lyase 15-like [G...   166   4e-39
ref|XP_004163042.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   166   5e-39
ref|XP_004152014.1| PREDICTED: probable pectate lyase 8-like [Cu...   166   5e-39

>ref|XP_003552152.1| PREDICTED: probable pectate lyase 8-like [Glycine max]
          Length = 421

 Score =  168 bits (426), Expect = 1e-39
 Identities = 82/99 (82%), Positives = 84/99 (84%)
 Frame = -1

Query: 359 SIFGSSHIWIDHNSLSNCVDGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDFYVRDKQM 180
           SIFGSSHIWIDHNSLSNC DGLVDAVMGSTAITISNNYFTHHNEVMLLGHSD YVRDKQM
Sbjct: 224 SIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQM 283

Query: 179 QVTIAYNHFGEGLIHRMPSLMH*KGHSVTSAYSHQVAVA 63
           QVTIAYNHFGEGLI RMP   H   H V + Y+H V  A
Sbjct: 284 QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYA 322


>ref|XP_003622996.1| Pectate lyase 1-27 [Medicago truncatula]
           gi|355498011|gb|AES79214.1| Pectate lyase 1-27 [Medicago
           truncatula]
          Length = 444

 Score =  167 bits (424), Expect = 2e-39
 Identities = 80/99 (80%), Positives = 84/99 (84%)
 Frame = -1

Query: 359 SIFGSSHIWIDHNSLSNCVDGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDFYVRDKQM 180
           SIFGSSHIWIDHNSLSNC DGLVDA+MGSTAIT+SNNYFTHHNEVMLLGHSD YVRDKQM
Sbjct: 247 SIFGSSHIWIDHNSLSNCADGLVDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYVRDKQM 306

Query: 179 QVTIAYNHFGEGLIHRMPSLMH*KGHSVTSAYSHQVAVA 63
           QVTIAYNHFGEGLI RMP   H   H V + Y+H V  A
Sbjct: 307 QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYA 345


>ref|XP_003530885.1| PREDICTED: probable pectate lyase 15-like [Glycine max]
          Length = 451

 Score =  166 bits (421), Expect = 4e-39
 Identities = 81/99 (81%), Positives = 84/99 (84%)
 Frame = -1

Query: 359 SIFGSSHIWIDHNSLSNCVDGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDFYVRDKQM 180
           SIFGSSHIWIDHNSLS+C DGLVDAVMGSTAITISNNYFTHHNEVMLLGHSD YVRDKQM
Sbjct: 254 SIFGSSHIWIDHNSLSSCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQM 313

Query: 179 QVTIAYNHFGEGLIHRMPSLMH*KGHSVTSAYSHQVAVA 63
           QVTIAYNHFGEGLI RMP   H   H V + Y+H V  A
Sbjct: 314 QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYA 352


>ref|XP_004163042.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 8-like
           [Cucumis sativus]
          Length = 392

 Score =  166 bits (420), Expect = 5e-39
 Identities = 80/99 (80%), Positives = 84/99 (84%)
 Frame = -1

Query: 359 SIFGSSHIWIDHNSLSNCVDGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDFYVRDKQM 180
           SIFGSSHIWIDHNSLS+C DGL+DAVMGSTAITISNNYFTHHNEVMLLGHSD YVRDKQM
Sbjct: 195 SIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQM 254

Query: 179 QVTIAYNHFGEGLIHRMPSLMH*KGHSVTSAYSHQVAVA 63
           QVTIAYNHFGEGLI RMP   H   H V + Y+H V  A
Sbjct: 255 QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYA 293


>ref|XP_004152014.1| PREDICTED: probable pectate lyase 8-like [Cucumis sativus]
          Length = 433

 Score =  166 bits (420), Expect = 5e-39
 Identities = 80/99 (80%), Positives = 84/99 (84%)
 Frame = -1

Query: 359 SIFGSSHIWIDHNSLSNCVDGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDFYVRDKQM 180
           SIFGSSHIWIDHNSLS+C DGL+DAVMGSTAITISNNYFTHHNEVMLLGHSD YVRDKQM
Sbjct: 236 SIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQM 295

Query: 179 QVTIAYNHFGEGLIHRMPSLMH*KGHSVTSAYSHQVAVA 63
           QVTIAYNHFGEGLI RMP   H   H V + Y+H V  A
Sbjct: 296 QVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYA 334


Top