BLASTX nr result

ID: Panax21_contig00009868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009868
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884804.1| predicted protein [Arabidopsis lyrata subsp....    62   6e-08
ref|XP_003589866.1| hypothetical protein MTR_1g040610 [Medicago ...    59   3e-07
ref|NP_187676.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-07
gb|AAF76371.1| hypothetical protein [Arabidopsis thaliana]             58   9e-07
ref|XP_003555484.1| PREDICTED: uncharacterized protein LOC100803...    56   3e-06

>ref|XP_002884804.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330644|gb|EFH61063.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1323

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +3

Query: 3    SAGSNHSQVS-LFGSGSLPVVSSQAPPATGAATVTQSIPFQFGSSGSSPVFGTSGITSFA 179
            SA S+ SQ S LFG+G+    ++     +G  T TQSIPFQFGSS S+P FG SG +S A
Sbjct: 1008 SAASSQSQASNLFGAGNAQTGNT----GSGTTTSTQSIPFQFGSSASAPSFGLSGNSSLA 1063

Query: 180  TSSSVIGSSVPAAKPFSSG 236
            ++SS  G S      F+SG
Sbjct: 1064 SNSSPFGFSKSEPAVFTSG 1082


>ref|XP_003589866.1| hypothetical protein MTR_1g040610 [Medicago truncatula]
            gi|355478914|gb|AES60117.1| hypothetical protein
            MTR_1g040610 [Medicago truncatula]
          Length = 1383

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = +3

Query: 3    SAGSNHSQV--SLFGSG-SLPVVSSQAPPAT-GAATVTQSIPFQFGSSGSSPVFGTSGIT 170
            ++ ++ SQ+  S+FGS  S   V + AP AT G AT TQS P  FGSS SSP+FG +G T
Sbjct: 980  TSANSQSQIQGSVFGSTISGSTVGTLAPSATSGFATSTQSQPVVFGSSSSSPLFGQTGNT 1039

Query: 171  SFATSSSVIGSSVPAAKPFSSG 236
            SF++ SS   SS PA    +SG
Sbjct: 1040 SFSSGSSSAPSSSPATNVLNSG 1061


>ref|NP_187676.1| uncharacterized protein [Arabidopsis thaliana]
            gi|12322777|gb|AAG51374.1|AC011560_6 hypothetical
            protein; 16538-21795 [Arabidopsis thaliana]
            gi|20260254|gb|AAM13025.1| unknown protein [Arabidopsis
            thaliana] gi|37202004|gb|AAQ89617.1| At3g10650
            [Arabidopsis thaliana] gi|332641418|gb|AEE74939.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 1309

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3    SAGSNHSQVS-LFGSGSLPVVSSQAPPATGAATVTQSIPFQFGSSGSSPVFGTSGITSFA 179
            SA S+ SQ S LFG+G+    ++     +G  T TQSIPFQFGSS S+P FG SG +S A
Sbjct: 992  SATSSQSQASNLFGAGNAQTGNT----GSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLA 1047

Query: 180  TSSSVIGSSVPAAKPFSS 233
            ++SS  G S      F+S
Sbjct: 1048 SNSSPFGFSKSEPAVFTS 1065


>gb|AAF76371.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1292

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3    SAGSNHSQVS-LFGSGSLPVVSSQAPPATGAATVTQSIPFQFGSSGSSPVFGTSGITSFA 179
            SA S+ SQ S LFG+G+    ++     +G  T TQSIPFQFGSS S+P FG SG +S A
Sbjct: 975  SATSSQSQASNLFGAGNAQTGNT----GSGTTTSTQSIPFQFGSSPSAPSFGLSGNSSLA 1030

Query: 180  TSSSVIGSSVPAAKPFSS 233
            ++SS  G S      F+S
Sbjct: 1031 SNSSPFGFSKSEPAVFTS 1048


>ref|XP_003555484.1| PREDICTED: uncharacterized protein LOC100803645 [Glycine max]
          Length = 1230

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/78 (44%), Positives = 45/78 (57%)
 Frame = +3

Query: 3    SAGSNHSQVSLFGSGSLPVVSSQAPPATGAATVTQSIPFQFGSSGSSPVFGTSGITSFAT 182
            +  S+ SQ S  G+ S  V+ +QA   +G AT TQ+    FGSS SS  FG SG T F++
Sbjct: 980  TVNSSQSQSSAVGASSGSVLGAQASFTSGFATSTQTQSVSFGSSASSSSFGLSGNTPFSS 1039

Query: 183  SSSVIGSSVPAAKPFSSG 236
            SSS   SS  A+  F SG
Sbjct: 1040 SSSFPSSSPAASAAFLSG 1057


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