BLASTX nr result

ID: Panax21_contig00009859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009859
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29964.3| unnamed protein product [Vitis vinifera]               63   4e-08
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...    63   4e-08
emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]    63   4e-08
ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227...    62   1e-07
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...    62   1e-07

>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 25/35 (71%), Positives = 33/35 (94%)
 Frame = +1

Query: 550 HRFFPLSHIQLSTPGNSRHQVGRMLTVDSNGCFIA 654
           HRFFP++H+QLS+PGN R+Q+G+ML +DSNGCFIA
Sbjct: 125 HRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIA 159


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 25/35 (71%), Positives = 33/35 (94%)
 Frame = +1

Query: 550 HRFFPLSHIQLSTPGNSRHQVGRMLTVDSNGCFIA 654
           HRFFP++H+QLS+PGN R+Q+G+ML +DSNGCFIA
Sbjct: 125 HRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIA 159


>emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 25/35 (71%), Positives = 33/35 (94%)
 Frame = +1

Query: 550 HRFFPLSHIQLSTPGNSRHQVGRMLTVDSNGCFIA 654
           HRFFP++H+QLS+PGN R+Q+G+ML +DSNGCFIA
Sbjct: 166 HRFFPVTHVQLSSPGNLRNQLGQMLAIDSNGCFIA 200


>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 550 HRFFPLSHIQLSTPGNSRHQVGRMLTVDSNGCFIA 654
           HRF P++HIQLS PGNSR+Q+GRML  DS+GCFIA
Sbjct: 127 HRFLPMTHIQLSNPGNSRNQIGRMLASDSSGCFIA 161


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 550 HRFFPLSHIQLSTPGNSRHQVGRMLTVDSNGCFIA 654
           HRF P++HIQLS PGNSR+Q+GRML  DS+GCFIA
Sbjct: 127 HRFLPMTHIQLSNPGNSRNQIGRMLASDSSGCFIA 161


Top