BLASTX nr result

ID: Panax21_contig00009855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009855
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39086.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   477   e-132
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   475   e-132
ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|XP_004165114.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   468   e-130

>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  477 bits (1227), Expect = e-132
 Identities = 238/306 (77%), Positives = 250/306 (81%)
 Frame = -1

Query: 923  DLLEQIGKDIYFDLVDHDKVRNFRIQKQMPFVQFKEEVAKEFGIPVQFQRFWIWAKRQNH 744
            DL EQIGKDIYFDLVDHDKVR+FRIQKQ PF  FKEEVAKEFGIPVQ+QRFWIWAKRQNH
Sbjct: 575  DLAEQIGKDIYFDLVDHDKVRSFRIQKQWPFTLFKEEVAKEFGIPVQYQRFWIWAKRQNH 634

Query: 743  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEIEPGLDXXXXXXXXXXXXXXXXX 564
            TYRPNRPLTPQEEAQSVGQLREVS K +NAELKLFLE+E G D                 
Sbjct: 635  TYRPNRPLTPQEEAQSVGQLREVSTKVNNAELKLFLEVELGPDLRPIPPPEKTKEDILLF 694

Query: 563  XXXXXXXXXXXXXDPKKEELRYAGRLFVKSSGKPIEILTKLNEMAGFDPDEEIELYEEVK 384
                         DP+KEELRY GRLFVKSSGKPIEILTKLNEMAGF PDEEIELYEE+K
Sbjct: 695  FKLY---------DPEKEELRYVGRLFVKSSGKPIEILTKLNEMAGFAPDEEIELYEEIK 745

Query: 383  FEPCVMCERLDKRASFRLSQIEDGDIICFQKYPQPQSEEECRYPDVPSYLEYVKNRQVVH 204
            FEPCVMCE L KR SFR SQIEDGDIICFQK   P+SEE+CRY DV S+LEYV+NRQVVH
Sbjct: 746  FEPCVMCEHLAKRTSFRFSQIEDGDIICFQKSAPPESEEQCRYSDVTSFLEYVQNRQVVH 805

Query: 203  FRTLERPKEDDFCLELSKLHTYDDVVERVAGKLGLEDPSKIRLTPHNCYSQQPKPHPIKY 24
            FR LERPKEDDFCLELSKLH YDDVVERVA +LGL+DPSKIRLT HNCYSQQPKP PIKY
Sbjct: 806  FRALERPKEDDFCLELSKLHNYDDVVERVARRLGLDDPSKIRLTSHNCYSQQPKPQPIKY 865

Query: 23   RVAEHL 6
            R  EHL
Sbjct: 866  RGVEHL 871


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera]
          Length = 1117

 Score =  477 bits (1227), Expect = e-132
 Identities = 238/306 (77%), Positives = 250/306 (81%)
 Frame = -1

Query: 923  DLLEQIGKDIYFDLVDHDKVRNFRIQKQMPFVQFKEEVAKEFGIPVQFQRFWIWAKRQNH 744
            DL EQIGKDIYFDLVDHDKVR+FRIQKQ PF  FKEEVAKEFGIPVQ+QRFWIWAKRQNH
Sbjct: 575  DLAEQIGKDIYFDLVDHDKVRSFRIQKQWPFTLFKEEVAKEFGIPVQYQRFWIWAKRQNH 634

Query: 743  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEIEPGLDXXXXXXXXXXXXXXXXX 564
            TYRPNRPLTPQEEAQSVGQLREVS K +NAELKLFLE+E G D                 
Sbjct: 635  TYRPNRPLTPQEEAQSVGQLREVSTKVNNAELKLFLEVELGPDLRPIPPPEKTKEDILLF 694

Query: 563  XXXXXXXXXXXXXDPKKEELRYAGRLFVKSSGKPIEILTKLNEMAGFDPDEEIELYEEVK 384
                         DP+KEELRY GRLFVKSSGKPIEILTKLNEMAGF PDEEIELYEE+K
Sbjct: 695  FKLY---------DPEKEELRYVGRLFVKSSGKPIEILTKLNEMAGFAPDEEIELYEEIK 745

Query: 383  FEPCVMCERLDKRASFRLSQIEDGDIICFQKYPQPQSEEECRYPDVPSYLEYVKNRQVVH 204
            FEPCVMCE L KR SFR SQIEDGDIICFQK   P+SEE+CRY DV S+LEYV+NRQVVH
Sbjct: 746  FEPCVMCEHLAKRTSFRFSQIEDGDIICFQKSAPPESEEQCRYSDVTSFLEYVQNRQVVH 805

Query: 203  FRTLERPKEDDFCLELSKLHTYDDVVERVAGKLGLEDPSKIRLTPHNCYSQQPKPHPIKY 24
            FR LERPKEDDFCLELSKLH YDDVVERVA +LGL+DPSKIRLT HNCYSQQPKP PIKY
Sbjct: 806  FRALERPKEDDFCLELSKLHNYDDVVERVARRLGLDDPSKIRLTSHNCYSQQPKPQPIKY 865

Query: 23   RVAEHL 6
            R  EHL
Sbjct: 866  RGVEHL 871


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  475 bits (1222), Expect = e-132
 Identities = 236/306 (77%), Positives = 251/306 (82%)
 Frame = -1

Query: 923  DLLEQIGKDIYFDLVDHDKVRNFRIQKQMPFVQFKEEVAKEFGIPVQFQRFWIWAKRQNH 744
            DL EQIG+DIYFDLVDHDKVRNFRIQKQ PF  FKEEVAKEFGIPVQFQRFWIWAKRQNH
Sbjct: 573  DLKEQIGRDIYFDLVDHDKVRNFRIQKQTPFNFFKEEVAKEFGIPVQFQRFWIWAKRQNH 632

Query: 743  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEIEPGLDXXXXXXXXXXXXXXXXX 564
            TYRPNRPLTPQEEAQSVGQLRE SNK H+AELKLFLE+E GLD                 
Sbjct: 633  TYRPNRPLTPQEEAQSVGQLREASNKAHSAELKLFLEVELGLDLRPIAPPDKTKEDILLF 692

Query: 563  XXXXXXXXXXXXXDPKKEELRYAGRLFVKSSGKPIEILTKLNEMAGFDPDEEIELYEEVK 384
                          P+K ELRY GRLFVKSSGKPIEIL KLNEMAGF  DEEIELYEE+K
Sbjct: 693  FKLYV---------PEKGELRYIGRLFVKSSGKPIEILAKLNEMAGFATDEEIELYEEIK 743

Query: 383  FEPCVMCERLDKRASFRLSQIEDGDIICFQKYPQPQSEEECRYPDVPSYLEYVKNRQVVH 204
            FEPCVMCE LDKR SFRLSQIEDGDIICFQK P  + EE+C+YPDVPS+LEYV NRQVVH
Sbjct: 744  FEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLEVEEDCKYPDVPSFLEYVHNRQVVH 803

Query: 203  FRTLERPKEDDFCLELSKLHTYDDVVERVAGKLGLEDPSKIRLTPHNCYSQQPKPHPIKY 24
            FR+LE+PKEDDFCLELSKLHTYDDVVE+VA ++GL+DPSKIRLT HNCYSQQPKP PIKY
Sbjct: 804  FRSLEKPKEDDFCLELSKLHTYDDVVEKVAQQIGLDDPSKIRLTSHNCYSQQPKPQPIKY 863

Query: 23   RVAEHL 6
            R  EHL
Sbjct: 864  RGVEHL 869


>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
            predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  473 bits (1216), Expect = e-131
 Identities = 236/306 (77%), Positives = 252/306 (82%)
 Frame = -1

Query: 923  DLLEQIGKDIYFDLVDHDKVRNFRIQKQMPFVQFKEEVAKEFGIPVQFQRFWIWAKRQNH 744
            DL EQIGKDIYFDLVDHDKVRNFRIQKQ  F  FKEEVAKE GIPVQFQRFWIWAKRQNH
Sbjct: 574  DLKEQIGKDIYFDLVDHDKVRNFRIQKQTQFSLFKEEVAKELGIPVQFQRFWIWAKRQNH 633

Query: 743  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEIEPGLDXXXXXXXXXXXXXXXXX 564
            TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLE+E GLD                 
Sbjct: 634  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEVELGLDLRPIAPPEKTKEDILLF 693

Query: 563  XXXXXXXXXXXXXDPKKEELRYAGRLFVKSSGKPIEILTKLNEMAGFDPDEEIELYEEVK 384
                         DP+K+ELRY GRLFVK+S KPIEIL KLN+MAGF  +EEIELYEE+K
Sbjct: 694  VKLY---------DPEKQELRYVGRLFVKNSSKPIEILAKLNQMAGFASEEEIELYEEIK 744

Query: 383  FEPCVMCERLDKRASFRLSQIEDGDIICFQKYPQPQSEEECRYPDVPSYLEYVKNRQVVH 204
            FEPCVMCE LDKRASFR SQIEDGDIICFQK P P++EE+CR PDVPSYLEYV NRQ+VH
Sbjct: 745  FEPCVMCEHLDKRASFRTSQIEDGDIICFQKSP-PENEEDCRNPDVPSYLEYVHNRQIVH 803

Query: 203  FRTLERPKEDDFCLELSKLHTYDDVVERVAGKLGLEDPSKIRLTPHNCYSQQPKPHPIKY 24
            FR+LE+ KEDDFCLELSKLHTYDDVVERVA ++GL+DPSKIRLT HNCYSQQPKP PIKY
Sbjct: 804  FRSLEKAKEDDFCLELSKLHTYDDVVERVARQIGLDDPSKIRLTSHNCYSQQPKPQPIKY 863

Query: 23   RVAEHL 6
            R  EHL
Sbjct: 864  RGVEHL 869


>ref|XP_004165114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
            sativus]
          Length = 662

 Score =  468 bits (1204), Expect = e-130
 Identities = 233/306 (76%), Positives = 251/306 (82%)
 Frame = -1

Query: 923  DLLEQIGKDIYFDLVDHDKVRNFRIQKQMPFVQFKEEVAKEFGIPVQFQRFWIWAKRQNH 744
            DL EQIGKDIYFDLVDHDKVR+FRIQKQ+PF  FKEEVAKE+GIPVQFQRFWIWAKRQNH
Sbjct: 122  DLQEQIGKDIYFDLVDHDKVRSFRIQKQVPFNLFKEEVAKEYGIPVQFQRFWIWAKRQNH 181

Query: 743  TYRPNRPLTPQEEAQSVGQLREVSNKTHNAELKLFLEIEPGLDXXXXXXXXXXXXXXXXX 564
            TYRPNRPLTPQEEAQSVGQLRE SNK +NAELKLFLE+E GLD                 
Sbjct: 182  TYRPNRPLTPQEEAQSVGQLREASNKANNAELKLFLEVELGLDLHPIVPPEKNKDDILLF 241

Query: 563  XXXXXXXXXXXXXDPKKEELRYAGRLFVKSSGKPIEILTKLNEMAGFDPDEEIELYEEVK 384
                         DP+K ELRY GRLFVKSS KPIEIL KLN+MAGFDPD+EIEL+EE+K
Sbjct: 242  FKLY---------DPEKGELRYVGRLFVKSSTKPIEILEKLNKMAGFDPDQEIELFEEIK 292

Query: 383  FEPCVMCERLDKRASFRLSQIEDGDIICFQKYPQPQSEEECRYPDVPSYLEYVKNRQVVH 204
            FEPCVMCE LD+R SFRLSQIEDGDIICFQK   P   EECRYPDVPS LEYV NRQVVH
Sbjct: 293  FEPCVMCEHLDRRTSFRLSQIEDGDIICFQK--SPIDSEECRYPDVPSSLEYVHNRQVVH 350

Query: 203  FRTLERPKEDDFCLELSKLHTYDDVVERVAGKLGLEDPSKIRLTPHNCYSQQPKPHPIKY 24
            FRTLE+PKEDDFCLELSK+HTYDDVVE+VA ++GL+DPSKIRLT HNCYSQQPKP PIKY
Sbjct: 351  FRTLEKPKEDDFCLELSKVHTYDDVVEKVAQRIGLDDPSKIRLTAHNCYSQQPKPQPIKY 410

Query: 23   RVAEHL 6
            R  +HL
Sbjct: 411  RGVDHL 416


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