BLASTX nr result

ID: Panax21_contig00009846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009846
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236925.1| uncharacterized protein LOC100526988 [Glycin...    60   7e-07
ref|XP_002523538.1| conserved hypothetical protein [Ricinus comm...    59   1e-06

>ref|NP_001236925.1| uncharacterized protein LOC100526988 [Glycine max]
           gi|255631318|gb|ACU16026.1| unknown [Glycine max]
          Length = 116

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 47/112 (41%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
 Frame = -1

Query: 873 MGTAILRPQDCLRYNRYHVQTLEXXXXXXXXXXXXXXXXXXXRKRIPVSGDRGEVQSRMV 694
           MGT++L   DCL+ +   +                       R+R+   GDR    S MV
Sbjct: 1   MGTSLLLSHDCLQGHHDALSPTPSSIRSQRNPNPSPNPYQTRRRRLH-DGDR----SGMV 55

Query: 693 EARSPVKNLVMGQVKILKRGEVLEALKLGFVDE--DLVLSSTDRLGPDPDTV 544
             + P  NLVMG VKILKRGE L A   G  DE  DLVL ST+RLGPDP +V
Sbjct: 56  -VKGPSANLVMGHVKILKRGETLSAETRGGDDEGFDLVLGSTNRLGPDPSSV 106


>ref|XP_002523538.1| conserved hypothetical protein [Ricinus communis]
           gi|223537245|gb|EEF38877.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 17/87 (19%)
 Frame = -1

Query: 741 RIPVSGDRGEVQSRMVEARSPVKNLVMGQVKILKRGEVLEAL-KLGFV------------ 601
           R P + +    +S  + A+ P +N VMG+VKILKRGE L  + K G              
Sbjct: 35  RNPQAFNHHRSRSGAMVAKFPSRNFVMGEVKILKRGESLAKVDKRGLSKKEKRKHPTMIM 94

Query: 600 ----DEDLVLSSTDRLGPDPDTVQKQI 532
               D DL+L STDRLGPDP+TVQ+QI
Sbjct: 95  KIEKDPDLILGSTDRLGPDPETVQEQI 121


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