BLASTX nr result

ID: Panax21_contig00009822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009822
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camell...   394   e-107
gb|AEZ55668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase...   386   e-105
dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt...   380   e-103
ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|A...   378   e-102
ref|XP_003540178.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl d...   371   e-100

>gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
          Length = 741

 Score =  394 bits (1013), Expect = e-107
 Identities = 194/219 (88%), Positives = 205/219 (93%)
 Frame = -1

Query: 658 MATGAVPTSFTGLKSKDHGLGFTKSMDFIKVSDLQRVMFRRTKVCVIRNSNPGSEIAEVQ 479
           MATGAVP SFTGLKS+DHGLGF KSMDF+KV DLQRV FRRTKV VIRNSNPGSEIAE+Q
Sbjct: 1   MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTKVSVIRNSNPGSEIAELQ 60

Query: 478 PASEGSPLLVPRQKYCESTHKTVRRKTSTVLVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 299
           PASEGSPL+VPRQKYCES HKTVRRKT TV+VGNVAIGSEHPIR+QTMTTTDTKDV  TV
Sbjct: 61  PASEGSPLVVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTTDTKDVDATV 120

Query: 298 EQVMRIADKGADLVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIAIRVAEC 119
           EQVMRIAD GAD+VRITVQGK+EADAC+EIKNSLVQKNY IPLVADIHFAP +A+RVAEC
Sbjct: 121 EQVMRIADTGADIVRITVQGKREADACYEIKNSLVQKNYTIPLVADIHFAPSVALRVAEC 180

Query: 118 FDKIRVNPGNFADRRAQFETLEYTEDDYQKELEHIEQVF 2
           FDKIRVNPGNFADRRAQFE LEYTEDDYQKELEHIE VF
Sbjct: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEHVF 219


>gb|AEZ55668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Salvia
           miltiorrhiza]
          Length = 742

 Score =  386 bits (991), Expect = e-105
 Identities = 193/221 (87%), Positives = 208/221 (94%), Gaps = 2/221 (0%)
 Frame = -1

Query: 658 MATGAVPTSFTGLKSKDH-GLGFTKSMDFIKVSDLQRVMFRRTKVCVIRNSN-PGSEIAE 485
           MATGAVP SFTGLKS+DH GLGF KS DF++VSDLQRV F R+KV VIRNSN PGSE  E
Sbjct: 1   MATGAVPASFTGLKSRDHRGLGFGKSSDFVRVSDLQRVKFGRSKVAVIRNSNNPGSETVE 60

Query: 484 VQPASEGSPLLVPRQKYCESTHKTVRRKTSTVLVGNVAIGSEHPIRIQTMTTTDTKDVAG 305
           ++PASEGSPLLVPRQKYCES HKTVRRKT TV+VGNVA+GSEHPIRIQTMTTTDTKD+AG
Sbjct: 61  LKPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDIAG 120

Query: 304 TVEQVMRIADKGADLVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIAIRVA 125
           TVEQVMRIAD+GADLVRITVQG+KEADACFEIKNSLVQKNYNIPLVADIHFAPP+A+RVA
Sbjct: 121 TVEQVMRIADQGADLVRITVQGRKEADACFEIKNSLVQKNYNIPLVADIHFAPPVAMRVA 180

Query: 124 ECFDKIRVNPGNFADRRAQFETLEYTEDDYQKELEHIEQVF 2
           ECFDKIRVNPGNFADRRAQFE LEYT+DDYQKELEHIE+VF
Sbjct: 181 ECFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVF 221


>dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea
           brasiliensis]
          Length = 740

 Score =  380 bits (976), Expect = e-103
 Identities = 185/219 (84%), Positives = 203/219 (92%)
 Frame = -1

Query: 658 MATGAVPTSFTGLKSKDHGLGFTKSMDFIKVSDLQRVMFRRTKVCVIRNSNPGSEIAEVQ 479
           MATGAVP SFTGLK++D  LGF KSMDF++V DL+R+   R K+ +IRNSNPG E+ E+Q
Sbjct: 1   MATGAVPASFTGLKTRDSSLGFGKSMDFVRVCDLKRIKSGRKKISMIRNSNPGPEMVELQ 60

Query: 478 PASEGSPLLVPRQKYCESTHKTVRRKTSTVLVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 299
           PASEGSPLLVPRQKYCES HKTVRRKT TV+VGNVA+GSEHPIR+QTMTT+DTKDVAGTV
Sbjct: 61  PASEGSPLLVPRQKYCESVHKTVRRKTRTVMVGNVALGSEHPIRVQTMTTSDTKDVAGTV 120

Query: 298 EQVMRIADKGADLVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIAIRVAEC 119
           EQVMRIAD+GADLVRITVQGK+EADACFEIKNSLVQKNYNIPLVADIHFAP +A+RVAEC
Sbjct: 121 EQVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 180

Query: 118 FDKIRVNPGNFADRRAQFETLEYTEDDYQKELEHIEQVF 2
           FDKIRVNPGNFADRRAQFE LEYTEDDYQKELEHIEQVF
Sbjct: 181 FDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEQVF 219


>ref|NP_001234648.1| GcpE [Solanum lycopersicum] gi|27462474|gb|AAO15447.1|AF435086_1
           GcpE [Solanum lycopersicum]
          Length = 740

 Score =  378 bits (970), Expect = e-102
 Identities = 185/219 (84%), Positives = 202/219 (92%)
 Frame = -1

Query: 658 MATGAVPTSFTGLKSKDHGLGFTKSMDFIKVSDLQRVMFRRTKVCVIRNSNPGSEIAEVQ 479
           MA G VP SFTGLKS ++GLGF KSM+FI+VSDLQRV FRRTK  VIRN+NPG E  E+Q
Sbjct: 1   MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNANPGQETIELQ 60

Query: 478 PASEGSPLLVPRQKYCESTHKTVRRKTSTVLVGNVAIGSEHPIRIQTMTTTDTKDVAGTV 299
           PASEGSPLLVPRQKYCES +KTVRR+T TV+VGNVA+GSEHPIRIQTMTTTDTKDVA TV
Sbjct: 61  PASEGSPLLVPRQKYCESIYKTVRRQTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAATV 120

Query: 298 EQVMRIADKGADLVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIAIRVAEC 119
           EQVM+IAD GAD+VRITVQG+KEADACFEIKN+LVQKNYNIPLVADIHFAP +A+RVAEC
Sbjct: 121 EQVMKIADAGADIVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC 180

Query: 118 FDKIRVNPGNFADRRAQFETLEYTEDDYQKELEHIEQVF 2
           FDKIRVNPGNFADRRAQFE LEYTEDDYQKELEHIE+VF
Sbjct: 181 FDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEEVF 219


>ref|XP_003540178.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
           synthase-like [Glycine max]
          Length = 741

 Score =  371 bits (952), Expect = e-100
 Identities = 184/220 (83%), Positives = 204/220 (92%), Gaps = 1/220 (0%)
 Frame = -1

Query: 658 MATGAVPTSFTGLKSKDHGLGFTKSMDFIKVSDLQRVMFR-RTKVCVIRNSNPGSEIAEV 482
           MA+GAVPT+F+ LK+ D  LGF KSMDF++VSDL+ +    R +V +IRNSNPG +IAE+
Sbjct: 1   MASGAVPTTFSTLKTWDSSLGFAKSMDFVRVSDLKSMKSSARKRVSIIRNSNPGQDIAEL 60

Query: 481 QPASEGSPLLVPRQKYCESTHKTVRRKTSTVLVGNVAIGSEHPIRIQTMTTTDTKDVAGT 302
           QPAS GSPLLVPRQKYCES HKTVRRKT+TV+VGNVAIGSEHPIRIQTMTTTDTKDVAGT
Sbjct: 61  QPASPGSPLLVPRQKYCESLHKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAGT 120

Query: 301 VEQVMRIADKGADLVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPPIAIRVAE 122
           VEQVMRIADKGAD+VRITVQGKKEADACFEIKN+LVQKNYNIPLVADIHFAP +A+RVAE
Sbjct: 121 VEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 180

Query: 121 CFDKIRVNPGNFADRRAQFETLEYTEDDYQKELEHIEQVF 2
           CFDKIRVNPGNFADRRAQFETLEYTE+DYQKELEHIE+VF
Sbjct: 181 CFDKIRVNPGNFADRRAQFETLEYTEEDYQKELEHIEKVF 220


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