BLASTX nr result
ID: Panax21_contig00009821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00009821 (434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21551.3| unnamed protein product [Vitis vinifera] 207 5e-52 ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti... 207 5e-52 emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera] 194 5e-48 ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2... 194 6e-48 ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu... 186 2e-45 >emb|CBI21551.3| unnamed protein product [Vitis vinifera] Length = 504 Score = 207 bits (528), Expect = 5e-52 Identities = 102/144 (70%), Positives = 119/144 (82%) Frame = +3 Query: 3 LDRSGTATSFAGSLGAPVLYGSAPVQQSISMPINGAAFXXXXXXXGQIVTPMASEPIGNP 182 LDR+G A+S AGSLG P+L GSAP QQ+IS+ ING A Q+VT ASEP+G P Sbjct: 349 LDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTP 408 Query: 183 SECLLLKNMFDPSTEEDPEFDLDIKEDVQEECSNYGRVKHIHVDKNSAGYVYLRFENVEG 362 +ECLLLKNMFDP+TE DP+FDLDIKE+VQEECSN+GRVKHI+V+K+SAGYVYLRFE VE Sbjct: 409 TECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEA 468 Query: 363 ASRAQQAMHQRWFARRMISAIFLQ 434 A AQ+AMH RWFARR+ISAIFLQ Sbjct: 469 AVTAQRAMHMRWFARRLISAIFLQ 492 >ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera] Length = 542 Score = 207 bits (528), Expect = 5e-52 Identities = 102/144 (70%), Positives = 119/144 (82%) Frame = +3 Query: 3 LDRSGTATSFAGSLGAPVLYGSAPVQQSISMPINGAAFXXXXXXXGQIVTPMASEPIGNP 182 LDR+G A+S AGSLG P+L GSAP QQ+IS+ ING A Q+VT ASEP+G P Sbjct: 387 LDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTP 446 Query: 183 SECLLLKNMFDPSTEEDPEFDLDIKEDVQEECSNYGRVKHIHVDKNSAGYVYLRFENVEG 362 +ECLLLKNMFDP+TE DP+FDLDIKE+VQEECSN+GRVKHI+V+K+SAGYVYLRFE VE Sbjct: 447 TECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEA 506 Query: 363 ASRAQQAMHQRWFARRMISAIFLQ 434 A AQ+AMH RWFARR+ISAIFLQ Sbjct: 507 AVTAQRAMHMRWFARRLISAIFLQ 530 >emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera] Length = 461 Score = 194 bits (494), Expect = 5e-48 Identities = 95/133 (71%), Positives = 110/133 (82%) Frame = +3 Query: 36 GSLGAPVLYGSAPVQQSISMPINGAAFXXXXXXXGQIVTPMASEPIGNPSECLLLKNMFD 215 GSLG P+L GSAP QQ+IS+ ING A Q+VT ASEP+G P+ECLLLKNMFD Sbjct: 317 GSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFD 376 Query: 216 PSTEEDPEFDLDIKEDVQEECSNYGRVKHIHVDKNSAGYVYLRFENVEGASRAQQAMHQR 395 P+TE DP+FDLDIKE+VQEECSN+GRVKHI+V+K+SAGYVYLRFE VE A AQ+AMH R Sbjct: 377 PATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMR 436 Query: 396 WFARRMISAIFLQ 434 WFARR+ISAIFLQ Sbjct: 437 WFARRLISAIFLQ 449 >ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa] Length = 391 Score = 194 bits (493), Expect = 6e-48 Identities = 94/143 (65%), Positives = 114/143 (79%) Frame = +3 Query: 3 LDRSGTATSFAGSLGAPVLYGSAPVQQSISMPINGAAFXXXXXXXGQIVTPMASEPIGNP 182 LDR+GTATS AGSLG P+L GSAP QQ+IS+P+NG ++ A E IG P Sbjct: 239 LDRTGTATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQP 298 Query: 183 SECLLLKNMFDPSTEEDPEFDLDIKEDVQEECSNYGRVKHIHVDKNSAGYVYLRFENVEG 362 SECLLLKNMFDP+TE +P+FDLDIKEDV+EECS YG+VKHI VDKNSAG+VYL+F+++E Sbjct: 299 SECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEA 358 Query: 363 ASRAQQAMHQRWFARRMISAIFL 431 A+RAQ+AMH RWFARR I AIF+ Sbjct: 359 AARAQRAMHMRWFARRSILAIFM 381 >ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus] Length = 598 Score = 186 bits (471), Expect = 2e-45 Identities = 92/144 (63%), Positives = 110/144 (76%) Frame = +3 Query: 3 LDRSGTATSFAGSLGAPVLYGSAPVQQSISMPINGAAFXXXXXXXGQIVTPMASEPIGNP 182 LDR+G ATS AGSLGAPVL GSAP Q+S S+P+NG A TP + +G+P Sbjct: 445 LDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANF-TPPVLQSVGSP 503 Query: 183 SECLLLKNMFDPSTEEDPEFDLDIKEDVQEECSNYGRVKHIHVDKNSAGYVYLRFENVEG 362 SECLLLKNMFDPSTE P+FD++IKEDV+EECS YGRVKHI+VDKNSAG VYL+++ VE Sbjct: 504 SECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEA 563 Query: 363 ASRAQQAMHQRWFARRMISAIFLQ 434 A AQ+AMH RWFA R IS +F+Q Sbjct: 564 AINAQRAMHLRWFAGRQISVLFMQ 587