BLASTX nr result

ID: Panax21_contig00009817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009817
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp....    67   7e-09
ref|XP_002514842.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
ref|XP_003599379.1| hypothetical protein MTR_3g032520 [Medicago ...    62   1e-07
ref|NP_172091.1| uncharacterized protein [Arabidopsis thaliana] ...    62   1e-07
emb|CAE04829.1| OSJNBa0084K01.1 [Oryza sativa Japonica Group] gi...    62   2e-07

>ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335422|gb|EFH65839.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +1

Query: 73  MWTDKSPGVKILWLWTIGTAAILVANVATTRMRDLQKQMN-DQASTPQVTEPVLIDNSST 249
           M  +KSPG+KILW+WTIGTAAILV +V  TRM+D+Q  MN +Q   P+  + V   +SS 
Sbjct: 1   MGREKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSMMNQNQEQAPKENQNVSAGDSSV 60

Query: 250 DSGEFVREE 276
            + E V  E
Sbjct: 61  LTDETVLPE 69


>ref|XP_002514842.1| conserved hypothetical protein [Ricinus communis]
           gi|223545893|gb|EEF47396.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 73

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = +1

Query: 82  DKSPGVKILWLWTIGTAAILVANVATTRMRDLQKQMNDQASTPQ---VTEPVLIDNSSTD 252
           +KSPG+KILWLWTIGTA ILV +V  TR++D+++ +N +    Q   +++ V++D +   
Sbjct: 4   EKSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQLVNTEQQQQQQSTISDSVIVDTTMET 63

Query: 253 SGEFVRE 273
               +RE
Sbjct: 64  QEGIIRE 70


>ref|XP_003599379.1| hypothetical protein MTR_3g032520 [Medicago truncatula]
           gi|355488427|gb|AES69630.1| hypothetical protein
           MTR_3g032520 [Medicago truncatula]
          Length = 72

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
 Frame = +1

Query: 82  DKSPGVKILWLWTIGTAAILVANVATTRMRDLQKQMN---DQASTPQVTEPVLIDNSSTD 252
           +KSPG+KILW+WT GTAAIL+ANV  T +RD Q  +N    Q    Q  + V+ID+S   
Sbjct: 6   EKSPGLKILWIWTFGTAAILIANVMRTSIRDFQNVLNAEEQQQQNQQQNDNVVIDDSRVS 65

Query: 253 SGEFVRE 273
               V +
Sbjct: 66  EERVVED 72


>ref|NP_172091.1| uncharacterized protein [Arabidopsis thaliana]
           gi|29824380|gb|AAP04150.1| unknown protein [Arabidopsis
           thaliana] gi|30793879|gb|AAP40392.1| unknown protein
           [Arabidopsis thaliana] gi|110739093|dbj|BAF01463.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332189808|gb|AEE27929.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 78

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +1

Query: 73  MWTDKSPGVKILWLWTIGTAAILVANVATTRMRDLQKQMN-DQASTPQVTEPVLIDNSST 249
           M  +KSPG+KILW+WTIGTAAILV +V  TRM+D+Q  MN +Q   P+  +     +SS 
Sbjct: 1   MGREKSPGLKILWVWTIGTAAILVTSVVRTRMQDMQTMMNQNQEQAPKENQNGSAGDSSV 60

Query: 250 DSGEFVREE 276
              E V  E
Sbjct: 61  LMDETVLPE 69


>emb|CAE04829.1| OSJNBa0084K01.1 [Oryza sativa Japonica Group]
           gi|38345205|emb|CAE54542.1| OSJNBa0015K02.21 [Oryza
           sativa Japonica Group] gi|116310044|emb|CAH67067.1|
           H0112G12.12 [Oryza sativa Indica Group]
           gi|125591944|gb|EAZ32294.1| hypothetical protein
           OsJ_16502 [Oryza sativa Japonica Group]
           gi|215697772|dbj|BAG91965.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740486|dbj|BAG97142.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195756|gb|EEC78183.1| hypothetical protein
           OsI_17780 [Oryza sativa Indica Group]
          Length = 66

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +1

Query: 70  TMWTDKSPGVKILWLWTIGTAAILVANVATTRMRDLQKQMNDQASTPQVTEPV 228
           T W++K PG+KILW+WT+GTA I++ NV  TR+ D+QK + ++        P+
Sbjct: 3   TRWSEKGPGLKILWIWTLGTAGIMITNVVRTRVNDMQKILQEEDEAAAAAAPM 55


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