BLASTX nr result

ID: Panax21_contig00009812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009812
         (1942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...   383   e-103
emb|CBI29641.3| unnamed protein product [Vitis vinifera]              363   9e-98
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...   332   2e-88
ref|XP_002328731.1| predicted protein [Populus trichocarpa] gi|2...   322   2e-85
ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [...   299   2e-78

>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score =  383 bits (983), Expect = e-103
 Identities = 207/476 (43%), Positives = 267/476 (56%), Gaps = 1/476 (0%)
 Frame = +1

Query: 1    YTDEEVERCYEEFYKDVHTEFLKYGEIVNFKVCRNGAFHLRGNLYVHYKSLNSAVMAYHS 180
            YTDEEVERCYEEFY+DV TEFLK+GEIVNFKVCRNG+FHLRGN+YVHYKSL+SAV+AYHS
Sbjct: 255  YTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHS 314

Query: 181  MNGRYFAGKQVKCEFVGVTRWKIAICGEYMKSRLKTCSRGTACNFIHCFRNPGGDYEWAD 360
            +NG Y+AGKQV CEFVGVTRWK+AICGEYMKSR KTCS GTACNFIHCFRNPGGDYEWAD
Sbjct: 315  INGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWAD 374

Query: 361  WDKPPPRYWMNKMTALFGYSDESGYDKQMEQENFSQLRHSRKMLSADRDRCHFXXXXXXX 540
            WDKPPPRYW+  M ALFG +DESGYDK+++QE+  + R +    + D DR H        
Sbjct: 375  WDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRSRE 434

Query: 541  XXXXXXXXXXXXYEEDDVQKRVHRHELSSSDGRKQRRTLDEKNCKEPNSKNSKHGNIRTS 720
                        ++E+D  K V+ ++  +SDGRK+ +  +E+  +E +  ++++   R  
Sbjct: 435  SGYSHGEYARRQFDENDAHKNVY-YQRHTSDGRKRIKMHEERYEEEAHFGDNRYSRSRIH 493

Query: 721  DTDSDGDCL-DRDKNGEAFHDRTRKSSRQRHSEVQDLREYHGGCTNRTHETEXXXXXXXX 897
            + +SDGD L D  ++ E  +D  RKSSRQR   ++   +Y G   N+T+++E        
Sbjct: 494  NVESDGDLLRDGTRDRERHNDHRRKSSRQREKVLESPDDY-GERKNKTYDSEG------- 545

Query: 898  XXXXXXXXXXXXXXXXXXXXXXXXXGDPLDRTVVRDKDWSDLDRDGEXXXXXXXXXXXXX 1077
                                                 DWSD + D +             
Sbjct: 546  -------------------------------------DWSDREGD-KSRKHGHTRKSLKH 567

Query: 1078 XXYVMEYPEYHGGSNSRTYETDSDGDLSDGDRKREGDHVHKRKSSRKMREVSDVQNYFGN 1257
                M   +  G SN+  +E DSDG  SD D   +G H H  K  +   ++S+  N   N
Sbjct: 568  QKEAMAVMDDLGDSNNSIHEPDSDGGWSDRDGDHDGHHDHTMKRLKNRSKMSEFSNDHRN 627

Query: 1258 STNRSNVTDFDGDRLHEXXXXXXXXXXXXXXXXXXXXVSEIHDDSRDNKNGAHVTD 1425
            S  R++ TD DGD  H                     VSE  DD  D +   H TD
Sbjct: 628  SKYRTDATDSDGDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDEDKRKRTHDTD 683


>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  363 bits (932), Expect = 9e-98
 Identities = 197/432 (45%), Positives = 254/432 (58%)
 Frame = +1

Query: 1    YTDEEVERCYEEFYKDVHTEFLKYGEIVNFKVCRNGAFHLRGNLYVHYKSLNSAVMAYHS 180
            YTDEEVERCYEEFY+DV TEFLK+GEIVNFKVCRNG+FHLRGN+YVHYKSL+SAV+AYHS
Sbjct: 279  YTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHS 338

Query: 181  MNGRYFAGKQVKCEFVGVTRWKIAICGEYMKSRLKTCSRGTACNFIHCFRNPGGDYEWAD 360
            +NG Y+AGKQV CEFVGVTRWK+AICGEYMKSR KTCS GTACNFIHCFRNPGGDYEWAD
Sbjct: 339  INGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFRNPGGDYEWAD 398

Query: 361  WDKPPPRYWMNKMTALFGYSDESGYDKQMEQENFSQLRHSRKMLSADRDRCHFXXXXXXX 540
            WDKPPPRYW+  M ALFG +DESGYDK+++QE+  + R +    + D DR H        
Sbjct: 399  WDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRSTSNAGTVDADRYHSRRSRSRE 458

Query: 541  XXXXXXXXXXXXYEEDDVQKRVHRHELSSSDGRKQRRTLDEKNCKEPNSKNSKHGNIRTS 720
                        ++E+D  K V+ ++  +SDGRK+ +  +E+  +E +  ++++   R  
Sbjct: 459  SGYSHGEYARRQFDENDAHKNVY-YQRHTSDGRKRIKMHEERYEEEAHFGDNRYSRSRIH 517

Query: 721  DTDSDGDCLDRDKNGEAFHDRTRKSSRQRHSEVQDLREYHGGCTNRTHETEXXXXXXXXX 900
            + +SDGD L+ DK+ +  H  TRKS + +  E   + +  G   N  HE +         
Sbjct: 518  NVESDGD-LEGDKSRK--HGHTRKSLKHQ-KEAMAVMDDLGDSNNSIHEPD--------- 564

Query: 901  XXXXXXXXXXXXXXXXXXXXXXXXGDPLDRTVVRDKDWSDLDRDGEXXXXXXXXXXXXXX 1080
                                              D  WSD D D +              
Sbjct: 565  ---------------------------------SDGGWSDRDGDHDGHHDHTMKRLKNRS 591

Query: 1081 XYVMEYPEYHGGSNSRTYETDSDGDLSDGDRKREGDHVHKRKSSRKMREVSDVQNYFGNS 1260
              + E+   H  S  RT  TDSDGD S  +R+ +  H H+RKSSR   EVS+  +   + 
Sbjct: 592  K-MSEFSNDHRNSKYRTDATDSDGDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDEDK 650

Query: 1261 TNRSNVTDFDGD 1296
              R++ TD  GD
Sbjct: 651  RKRTHDTDPTGD 662



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 35/105 (33%), Positives = 45/105 (42%)
 Frame = +1

Query: 1111 GGSNSRTYETDSDGDLSDGDRKREGDHVHKRKSSRKMREVSDVQNYFGNSTNRSNVTDFD 1290
            G SN+  +E DSDG  SD D   +G H H  K  +   ++S+  N   NS  R++ TD D
Sbjct: 554  GDSNNSIHEPDSDGGWSDRDGDHDGHHDHTMKRLKNRSKMSEFSNDHRNSKYRTDATDSD 613

Query: 1291 GDRLHEXXXXXXXXXXXXXXXXXXXXVSEIHDDSRDNKNGAHVTD 1425
            GD  H                     VSE  DD  D +   H TD
Sbjct: 614  GDSSHRNRQGDRYHSHRRKSSRHWDEVSETADDDEDKRKRTHDTD 658


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 857

 Score =  332 bits (851), Expect = 2e-88
 Identities = 171/275 (62%), Positives = 196/275 (71%), Gaps = 2/275 (0%)
 Frame = +1

Query: 1    YTDEEVERCYEEFYKDVHTEFLKYGEIVNFKVCRNGAFHLRGNLYVHYKSLNSAVMAYHS 180
            +TDEEVER YEEFY+DVHTEFLKYGEIVNFKVC+N +FHLRGN+YV YKSL+SAV+AY S
Sbjct: 270  HTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAYCS 329

Query: 181  MNGRYFAGKQVKCEFVGVTRWKIAICGEYMKSRLKTCSRGTACNFIHCFRNPGGDYEWAD 360
            +NGRYFAGKQV CEFV VTRWK+AICGEYMKSRL+ CSRGTACNFIHCFRNPGGDYEWAD
Sbjct: 330  INGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFRNPGGDYEWAD 389

Query: 361  WDKPPPRYWMNKMTALFGYSDESGYDKQMEQENFSQLRHSRKMLSADRDRCHFXXXXXXX 540
            WDKPPPRYW+ KMTALFGYSDES  DKQMEQ+ F Q R S K + A  DR H        
Sbjct: 390  WDKPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSKRIPAYTDRHHSSRSRSRD 449

Query: 541  XXXXXXXXXXXXYEEDDVQKRVHRHELSSSDGRKQRRTLDEKNC-KEPNSKNSKHGNIRT 717
                         E+DD ++R HRH   S D RKQ    DEK+  K+ +  N K  ++ +
Sbjct: 450  IYYSLHYSGKSDNEDDD-EERTHRH-WRSDDDRKQIHIHDEKSYRKDYHLSNRKSHDMIS 507

Query: 718  SDTDSDGDC-LDRDKNGEAFHDRTRKSSRQRHSEV 819
                SDGD   DR++N    H    K S+  HSEV
Sbjct: 508  DGGWSDGDSEADRERNKRHGHGHVTKRSK-HHSEV 541


>ref|XP_002328731.1| predicted protein [Populus trichocarpa] gi|222839029|gb|EEE77380.1|
            predicted protein [Populus trichocarpa]
          Length = 546

 Score =  322 bits (826), Expect = 2e-85
 Identities = 188/432 (43%), Positives = 232/432 (53%), Gaps = 7/432 (1%)
 Frame = +1

Query: 1    YTDEEVERCYEEFYKDVHTEFLKYGEIVNFKVCRNGAFHLRGNLYVHYKSLNSAVMAYHS 180
            YTDEEVE  YEEFY+DVHTEFLKYGEIVNFKVC+NG+FHLRGN+YVHYKSL+SA++AYHS
Sbjct: 18   YTDEEVECSYEEFYEDVHTEFLKYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILAYHS 77

Query: 181  MNGRYFAGKQVKCEFVGVTRWKIAICGEYMKSRLKTCSRGTACNFIHCFRNPGGDYEWAD 360
            +NGRYFAGKQVKCEF+ +TRWK+AICGE+MKSRLKTCS G+ACNFIHCFRNPGGDYEWAD
Sbjct: 78   INGRYFAGKQVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIHCFRNPGGDYEWAD 137

Query: 361  WDKPPPRYWMNKMTALFGYSDESGYDKQMEQENFSQLRHSRKMLSADRDRCHFXXXXXXX 540
            WD+PPPR+W+ KM +LFGYS ES Y+KQ  +E   Q R S  ML+ADRDR          
Sbjct: 138  WDRPPPRFWVKKMASLFGYSAESSYEKQTVEEKLRQTRMSSNMLTADRDRHDRMRRSRSR 197

Query: 541  XXXXXXXXXXXXYE-EDDVQKRVHRHELSSSDGRKQRRTLDEKNCKEPNSKNSKHGNIRT 717
                         + EDD  +  H    S  DG                  ++  G    
Sbjct: 198  DMDCAIHSSHKSGDIEDDFPEVTHWRSHSKDDG------------------SNSDGRQSD 239

Query: 718  SDTDSDGDCLDRDKNGEAFHDRTRKSSRQRHSEVQDLREYHGGCTNRTHETEXXXXXXXX 897
             DT+ D D  DRD+     H   RK S+  HS+V +    +G   +R+HE +        
Sbjct: 240  RDTERDRD-RDRDRERYRHHYHARKRSK-HHSKVSERSTDYGENNSRSHEIDQNELSDDG 297

Query: 898  XXXXXXXXXXXXXXXXXXXXXXXXXGDPLDRTVVRDKDWSDLDRDGEXXXXXXXXXXXXX 1077
                                      D   R          LDRD               
Sbjct: 298  RNRHKHFGSTKSSGRRTFIDDDKDSKDEAHRMY-----GYRLDRDINREESRHRTGKSSR 352

Query: 1078 XXYVMEYPEYHGGSNSRTYETDSDGDLSDGDRKREGDHVHKRKSSRK-MREVSDVQNYFG 1254
                +  P+ HG   SRT ++ S  + S  DR R   H+ K   ++K + E  D  N++ 
Sbjct: 353  HQSRVRSPDDHGDGESRTLDSGSSREGSPRDRDRHHHHISKSLGNQKNVLEFPD--NHWD 410

Query: 1255 N-----STNRSN 1275
            N     STN SN
Sbjct: 411  NGPRTYSTNSSN 422


>ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355481941|gb|AES63144.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1146

 Score =  299 bits (766), Expect = 2e-78
 Identities = 184/458 (40%), Positives = 239/458 (52%), Gaps = 22/458 (4%)
 Frame = +1

Query: 1    YTDEEVERCYEEFYKDVHTEFLKYGEIVNFKVCRNGAFHLRGNLYVHYKSLNSAVMAYHS 180
            YTDEEVERC+EEFY+DVHTEFLK+GEIVNFKVC+NG+FHLRGN+YV YK L+SA++AY+S
Sbjct: 6    YTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNS 65

Query: 181  MNGRYFAGKQVKCEFVGVTRWKIAICGEYMKSRLKTCSRGTACNFIHCFRNPGGDYEWAD 360
            +NGRYFAGKQV C+FV +TRWK+AICGEYMKS  KTCS GTACNFIHCFRNPGGDYEWAD
Sbjct: 66   VNGRYFAGKQVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIHCFRNPGGDYEWAD 125

Query: 361  WDKPPPRYWMNKMTALFGYSDESGYDKQMEQENFSQLRHSRKMLSADRDRCHFXXXXXXX 540
             DKPPP++W+ +M ALFG+SD    +      NFS L+HS  +L  D DR H        
Sbjct: 126  SDKPPPKFWVKEMVALFGHSDNC--EMSRVHGNFSALKHSSNILETDSDRYHSRRSRSRE 183

Query: 541  XXXXXXXXXXXXYEEDDVQKRVHRHELSSSDGRKQRRTLDEKNCKEPNSKNSKHGNIRTS 720
                         +ED+               RKQR   +E N    ++   K+ N +TS
Sbjct: 184  MGQLYGGRSSRRRQEDE---------------RKQRTLDEEWNTNYKDNHKRKYRN-KTS 227

Query: 721  DTDSDGDCLDRDKNGEAFHDRTRKSS--------RQRHSEVQDL--------REYHGGCT 852
            D+DSD + L+ + + + +H+ TRKSS         +RH E  D+         E      
Sbjct: 228  DSDSDKEGLE-EVDRKKYHEHTRKSSFNWNKDDNSRRHEEYSDVDRVTINRDNEKPHDRK 286

Query: 853  NRTHETEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPLDRTVVRDKDWSDLDRD 1032
             R  +                                       D + V D+  SD DR 
Sbjct: 287  GRNSQKSNRDSRDWIYEAGCDEDRDGDGRKHHISRRKGSRHQSRDNSNVTDESESDKDRG 346

Query: 1033 GEXXXXXXXXXXXXXXXYVMEYPEYHG--GSNSRTYETDSDGDL----SDGDRKREGDHV 1194
             E                  E  + HG  G NS+ +  DS   +    SD DR R+  H 
Sbjct: 347  HEEYSDVDWDTMS------RENEKQHGSNGRNSQKWNRDSRYRIYEAGSDEDRHRKRHHS 400

Query: 1195 HKRKSSRKMREVSDVQNYFGNSTNRSNVTDFDGDRLHE 1308
             +RK SR             +++N ++ ++ D DR HE
Sbjct: 401  SQRKGSRHRSR---------DNSNVADESESDKDRGHE 429


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