BLASTX nr result

ID: Panax21_contig00009811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009811
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...   209   3e-52
emb|CBI21082.3| unnamed protein product [Vitis vinifera]              209   3e-52
ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling fa...   199   2e-49
ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling fa...   199   2e-49
ref|XP_003603311.1| Chromatin remodeling complex subunit [Medica...   199   3e-49

>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score =  209 bits (531), Expect = 3e-52
 Identities = 117/187 (62%), Positives = 125/187 (66%)
 Frame = +2

Query: 11   QMPGAPPLFGDDIVYCLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQEL 190
            + PGAP LF DDIV   PGLKGGRHWKEEHDLLLLRAV+KHGYGRWQAIVDDK+L+VQE+
Sbjct: 1060 EKPGAP-LFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKVQEV 1118

Query: 191  ICQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIASTETTISNNLKTT 370
            ICQE NLPFIN P                               + A++E    N  K T
Sbjct: 1119 ICQEQNLPFINFP--------------------VPGGSQAPDGTHTANSEAP-GNQTKGT 1157

Query: 371  VGVNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEY 550
                 L  D  QG TDA NR QLYQD SSVLYHFREMQRRQVEFIKKRVLLLEKALN EY
Sbjct: 1158 GSGTDLAPDVTQGGTDASNRAQLYQD-SSVLYHFREMQRRQVEFIKKRVLLLEKALNTEY 1216

Query: 551  QKEIFGD 571
            QKE FGD
Sbjct: 1217 QKEYFGD 1223


>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score =  209 bits (531), Expect = 3e-52
 Identities = 117/187 (62%), Positives = 125/187 (66%)
 Frame = +2

Query: 11   QMPGAPPLFGDDIVYCLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQEL 190
            + PGAP LF DDIV   PGLKGGRHWKEEHDLLLLRAV+KHGYGRWQAIVDDK+L+VQE+
Sbjct: 1060 EKPGAP-LFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKVQEV 1118

Query: 191  ICQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIASTETTISNNLKTT 370
            ICQE NLPFIN P                               + A++E    N  K T
Sbjct: 1119 ICQEQNLPFINFP--------------------VPGGSQAPDGTHTANSEAP-GNQTKGT 1157

Query: 371  VGVNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEY 550
                 L  D  QG TDA NR QLYQD SSVLYHFREMQRRQVEFIKKRVLLLEKALN EY
Sbjct: 1158 GSGTDLAPDVTQGGTDASNRAQLYQD-SSVLYHFREMQRRQVEFIKKRVLLLEKALNTEY 1216

Query: 551  QKEIFGD 571
            QKE FGD
Sbjct: 1217 QKEYFGD 1223


>ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1440

 Score =  199 bits (507), Expect = 2e-49
 Identities = 108/181 (59%), Positives = 124/181 (68%)
 Frame = +2

Query: 29   PLFGDDIVYCLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQELICQELN 208
            PLF DDI+   PGLKG + WKEEHD +LLRAVLKHGYGRWQAIVDDK+L++QE+ICQELN
Sbjct: 1062 PLFSDDILLRYPGLKGAKIWKEEHDYVLLRAVLKHGYGRWQAIVDDKDLKIQEVICQELN 1121

Query: 209  LPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIASTETTISNNLKTTVGVNGL 388
            L FINLP                              AN+ + E  +SNN     G + +
Sbjct: 1122 LSFINLP------------------VPGQVSSQAQNGANLTNAE--VSNNQSKENGGSDI 1161

Query: 389  GADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEYQKEIFG 568
             AD AQG+ DA N+ QLYQD SS+LYHFR+MQRRQVEFIKKRVLLLEK LNAEYQKE FG
Sbjct: 1162 AADGAQGSGDARNQAQLYQD-SSILYHFRDMQRRQVEFIKKRVLLLEKGLNAEYQKEYFG 1220

Query: 569  D 571
            D
Sbjct: 1221 D 1221


>ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1441

 Score =  199 bits (507), Expect = 2e-49
 Identities = 110/189 (58%), Positives = 128/189 (67%)
 Frame = +2

Query: 5    SSQMPGAPPLFGDDIVYCLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQ 184
            +SQ P  P LF DDI+   PGLKG + WKEEHDL+LLRAVLKHGYGRWQAIVDDK+L++Q
Sbjct: 1055 ASQHPQTP-LFSDDILLRYPGLKGAKIWKEEHDLVLLRAVLKHGYGRWQAIVDDKDLKIQ 1113

Query: 185  ELICQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIASTETTISNNLK 364
            E+ICQELNLPFINLP                              AN+ + E  + N+  
Sbjct: 1114 EVICQELNLPFINLP------------------VPGHVSSQAQNGANLTNAE--VPNSQS 1153

Query: 365  TTVGVNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNA 544
               G + +  D AQG+ DA N+ QLYQD SS+LYHFR+MQRRQVEFIKKRVLLLEK LNA
Sbjct: 1154 KENGGSDIATDGAQGSGDARNQAQLYQD-SSILYHFRDMQRRQVEFIKKRVLLLEKGLNA 1212

Query: 545  EYQKEIFGD 571
            EYQKE FGD
Sbjct: 1213 EYQKEYFGD 1221


>ref|XP_003603311.1| Chromatin remodeling complex subunit [Medicago truncatula]
            gi|355492359|gb|AES73562.1| Chromatin remodeling complex
            subunit [Medicago truncatula]
          Length = 1483

 Score =  199 bits (506), Expect = 3e-49
 Identities = 108/181 (59%), Positives = 124/181 (68%)
 Frame = +2

Query: 29   PLFGDDIVYCLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQELICQELN 208
            PLF DDI+   PGLKG R WKEEHD +LLRAVLKHGYGRWQAIVDD++L++QE+ICQELN
Sbjct: 1135 PLFSDDILLRYPGLKGIRKWKEEHDFMLLRAVLKHGYGRWQAIVDDRDLKIQEIICQELN 1194

Query: 209  LPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIASTETTISNNLKTTVGVNGL 388
            LP INLP                              AN+A+ E  I +N     G +G+
Sbjct: 1195 LPVINLP------------------GPGQVGSHVQNGANVANAE--IPSNESRENGGSGI 1234

Query: 389  GADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEYQKEIFG 568
             AD AQG+ DA N+ QLYQDSS  LYHFR+MQRRQVEF+KKRVLLLEK LNAEYQKE FG
Sbjct: 1235 AADGAQGSGDAKNQTQLYQDSS--LYHFRDMQRRQVEFVKKRVLLLEKGLNAEYQKEYFG 1292

Query: 569  D 571
            D
Sbjct: 1293 D 1293


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