BLASTX nr result

ID: Panax21_contig00009810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009810
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...   216   2e-54
emb|CBI21082.3| unnamed protein product [Vitis vinifera]              216   2e-54
emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]   216   2e-54
ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling fa...   209   3e-52
ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling fa...   209   3e-52

>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score =  216 bits (551), Expect = 2e-54
 Identities = 117/186 (62%), Positives = 125/186 (67%)
 Frame = +2

Query: 11   QMPGPPLFGDDIVYYLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQELI 190
            + PG PLF DDIV   PGLKGGRHWKEEHDLLLLRAV+KHGYGRWQAIVDDK+L+VQE+I
Sbjct: 1060 EKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKVQEVI 1119

Query: 191  CQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAANIASTETTISNNLKTAV 370
            CQE NLPFIN P                            D  + A++E    N  K   
Sbjct: 1120 CQEQNLPFINFP--------------------VPGGSQAPDGTHTANSEAP-GNQTKGTG 1158

Query: 371  GGNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEYQ 550
             G  L  D  QG TDA NR QLYQD SSVLYHFREMQRRQVEFIKKRVLLLEKALN EYQ
Sbjct: 1159 SGTDLAPDVTQGGTDASNRAQLYQD-SSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQ 1217

Query: 551  KEIFGD 568
            KE FGD
Sbjct: 1218 KEYFGD 1223


>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score =  216 bits (551), Expect = 2e-54
 Identities = 117/186 (62%), Positives = 125/186 (67%)
 Frame = +2

Query: 11   QMPGPPLFGDDIVYYLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQELI 190
            + PG PLF DDIV   PGLKGGRHWKEEHDLLLLRAV+KHGYGRWQAIVDDK+L+VQE+I
Sbjct: 1060 EKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKVQEVI 1119

Query: 191  CQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAANIASTETTISNNLKTAV 370
            CQE NLPFIN P                            D  + A++E    N  K   
Sbjct: 1120 CQEQNLPFINFP--------------------VPGGSQAPDGTHTANSEAP-GNQTKGTG 1158

Query: 371  GGNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEYQ 550
             G  L  D  QG TDA NR QLYQD SSVLYHFREMQRRQVEFIKKRVLLLEKALN EYQ
Sbjct: 1159 SGTDLAPDVTQGGTDASNRAQLYQD-SSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQ 1217

Query: 551  KEIFGD 568
            KE FGD
Sbjct: 1218 KEYFGD 1223


>emb|CAN81391.1| hypothetical protein VITISV_043255 [Vitis vinifera]
          Length = 755

 Score =  216 bits (551), Expect = 2e-54
 Identities = 117/186 (62%), Positives = 125/186 (67%)
 Frame = +2

Query: 11  QMPGPPLFGDDIVYYLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQELI 190
           + PG PLF DDIV   PGLKGGRHWKEEHDLLLLRAV+KHGYGRWQAIVDDK+L+VQE+I
Sbjct: 343 EKPGAPLFEDDIVSRFPGLKGGRHWKEEHDLLLLRAVIKHGYGRWQAIVDDKDLKVQEVI 402

Query: 191 CQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAANIASTETTISNNLKTAV 370
           CQE NLPFIN P                            D  + A++E    N  K   
Sbjct: 403 CQEQNLPFINFP--------------------VPGGSQAPDGTHTANSEAP-GNQTKGTG 441

Query: 371 GGNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEYQ 550
            G  L  D  QG TDA NR QLYQD SSVLYHFREMQRRQVEFIKKRVLLLEKALN EYQ
Sbjct: 442 SGTDLAPDVTQGGTDASNRAQLYQD-SSVLYHFREMQRRQVEFIKKRVLLLEKALNTEYQ 500

Query: 551 KEIFGD 568
           KE FGD
Sbjct: 501 KEYFGD 506


>ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1440

 Score =  209 bits (531), Expect = 3e-52
 Identities = 112/187 (59%), Positives = 129/187 (68%)
 Frame = +2

Query: 8    SQMPGPPLFGDDIVYYLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQEL 187
            SQ P  PLF DDI+   PGLKG + WKEEHD +LLRAVLKHGYGRWQAIVDDK+L++QE+
Sbjct: 1056 SQHPQTPLFSDDILLRYPGLKGAKIWKEEHDYVLLRAVLKHGYGRWQAIVDDKDLKIQEV 1115

Query: 188  ICQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAANIASTETTISNNLKTA 367
            ICQELNL FINLP                            + AN+ + E  +SNN    
Sbjct: 1116 ICQELNLSFINLP------------------VPGQVSSQAQNGANLTNAE--VSNNQSKE 1155

Query: 368  VGGNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAEY 547
             GG+ + AD AQG+ DA N+ QLYQD SS+LYHFR+MQRRQVEFIKKRVLLLEK LNAEY
Sbjct: 1156 NGGSDIAADGAQGSGDARNQAQLYQD-SSILYHFRDMQRRQVEFIKKRVLLLEKGLNAEY 1214

Query: 548  QKEIFGD 568
            QKE FGD
Sbjct: 1215 QKEYFGD 1221


>ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine
            max]
          Length = 1441

 Score =  209 bits (531), Expect = 3e-52
 Identities = 111/188 (59%), Positives = 130/188 (69%)
 Frame = +2

Query: 5    SSQMPGPPLFGDDIVYYLPGLKGGRHWKEEHDLLLLRAVLKHGYGRWQAIVDDKELRVQE 184
            +SQ P  PLF DDI+   PGLKG + WKEEHDL+LLRAVLKHGYGRWQAIVDDK+L++QE
Sbjct: 1055 ASQHPQTPLFSDDILLRYPGLKGAKIWKEEHDLVLLRAVLKHGYGRWQAIVDDKDLKIQE 1114

Query: 185  LICQELNLPFINLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAANIASTETTISNNLKT 364
            +ICQELNLPFINLP                            + AN+ + E  + N+   
Sbjct: 1115 VICQELNLPFINLP------------------VPGHVSSQAQNGANLTNAE--VPNSQSK 1154

Query: 365  AVGGNGLGADAAQGATDAINRPQLYQDSSSVLYHFREMQRRQVEFIKKRVLLLEKALNAE 544
              GG+ +  D AQG+ DA N+ QLYQD SS+LYHFR+MQRRQVEFIKKRVLLLEK LNAE
Sbjct: 1155 ENGGSDIATDGAQGSGDARNQAQLYQD-SSILYHFRDMQRRQVEFIKKRVLLLEKGLNAE 1213

Query: 545  YQKEIFGD 568
            YQKE FGD
Sbjct: 1214 YQKEYFGD 1221


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