BLASTX nr result

ID: Panax21_contig00009807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009807
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   220   4e-55
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   202   1e-49
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma...   202   1e-49
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   200   5e-49
ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  220 bits (561), Expect = 4e-55
 Identities = 146/340 (42%), Positives = 196/340 (57%), Gaps = 7/340 (2%)
 Frame = -1

Query: 1005 VLCANKSDIDVNWNVETEERLNLIGQELETVTVNDVVKSFDGVCSRMQKLLDSL----GE 838
            VL  N+ +ID+    E  ER+  I ++LE+VTV +  KSF GVCSR+Q  L SL    GE
Sbjct: 167  VLDVNEPEIDLKER-ELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGE 225

Query: 837  -ITSENSVSNKAALVQKSFSAIQTVNCVFCSMSLNQKEQNRDTLLRLLVHITSQNPPIFS 661
             +  E+SV  K AL Q+  +AI+ +N VFCSM+ NQKE N+D   RLL  +   + PIFS
Sbjct: 226  KVVGESSVPTKDALAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFS 285

Query: 660  SEQMKEIEVMIPFLG--ALDISLNSEDIVTEKVIQIAERVNQNEYDVSAHIGYENVNSLK 487
             + +KE+EVM+ FL   A   S  + D V +  +Q+ + +N+N  D S         S K
Sbjct: 286  IQHIKEVEVMMSFLDTPAAQSSAEASDKVND--VQVTDGMNRNILDSSVESSGRAFASAK 343

Query: 486  KCILDSVSVESSEQNVPYIMLESLKTGVASYKGRGAXXXXXXXXXXXDAESLPSPTRETP 307
            K  LDS+SVES  QN P    ++LK G++S +GR             D +SLPSPT + P
Sbjct: 344  KLSLDSISVESYNQNNP----DALKPGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAP 399

Query: 306  PLLPIERALAFGDGVVRPEWSVPRPALDTQSTVVQSYETDALKAVSTYQQKFGRNSFLMT 127
               P+ ++          E    + A +TQ +++  YETDALKAVSTYQQKFG  SFL  
Sbjct: 400  QCFPVNKS----------ELVTAKVAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPI 449

Query: 126  NRLPSPTPSEESDNGEVDTGGEVSSSSILGNVNPINAPNL 7
            ++LPSPTPSEES +   D  GEVSSSS +      NAP L
Sbjct: 450  DKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPAL 489


>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
            phosphatase-like 3-like [Cucumis sativus]
          Length = 1249

 Score =  202 bits (513), Expect = 1e-49
 Identities = 126/344 (36%), Positives = 197/344 (57%), Gaps = 6/344 (1%)
 Frame = -1

Query: 1014 NNNVLCANKSDIDVN---WNVET---EERLNLIGQELETVTVNDVVKSFDGVCSRMQKLL 853
            ++  + ++  D+D+N   +++ET   +E L  I + L+ VT++   KSF  VCS++   +
Sbjct: 169  DSKAMLSDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSI 228

Query: 852  DSLGEITSENSVSNKAALVQKSFSAIQTVNCVFCSMSLNQKEQNRDTLLRLLVHITSQNP 673
            ++  E+     V  K AL+Q+ ++A++ +N VFCSM+L++KE++++ L RLL ++ + +P
Sbjct: 229  ETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDP 288

Query: 672  PIFSSEQMKEIEVMIPFLGALDISLNSEDIVTEKVIQIAERVNQNEYDVSAHIGYENVNS 493
            P+FS EQ+K +EV +P   +LD   +      E  I I   V   ++  +       +  
Sbjct: 289  PLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSSQLTP 348

Query: 492  LKKCILDSVSVESSEQNVPYIMLESLKTGVASYKGRGAXXXXXXXXXXXDAESLPSPTRE 313
              K   DS+      +N   I+ E L++GV+S KGRG            DA+SLPSPTRE
Sbjct: 349  SNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE 408

Query: 312  TPPLLPIERALAFGDGVVRPEWSVPRPALDTQSTVVQSYETDALKAVSTYQQKFGRNSFL 133
             P +  ++++   G+       +  + A     +    YETDALKAVSTYQQKFGR+SF 
Sbjct: 409  APTIFSVQKS---GN-------APTKMAFPVDGSRSHPYETDALKAVSTYQQKFGRSSFS 458

Query: 132  MTNRLPSPTPSEESDNGEVDTGGEVSSSSILGNVNPINAPNLSK 1
            M +RLPSPTPSEE D G  D GGEVSSSSI   +  + + N+SK
Sbjct: 459  MADRLPSPTPSEEHDGGG-DIGGEVSSSSI---IRSLKSSNVSK 498


>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Cucumis sativus]
          Length = 1249

 Score =  202 bits (513), Expect = 1e-49
 Identities = 126/344 (36%), Positives = 197/344 (57%), Gaps = 6/344 (1%)
 Frame = -1

Query: 1014 NNNVLCANKSDIDVN---WNVET---EERLNLIGQELETVTVNDVVKSFDGVCSRMQKLL 853
            ++  + ++  D+D+N   +++ET   +E L  I + L+ VT++   KSF  VCS++   +
Sbjct: 169  DSKAMLSDSRDMDINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSI 228

Query: 852  DSLGEITSENSVSNKAALVQKSFSAIQTVNCVFCSMSLNQKEQNRDTLLRLLVHITSQNP 673
            ++  E+     V  K AL+Q+ ++A++ +N VFCSM+L++KE++++ L RLL ++ + +P
Sbjct: 229  ETFVELLQGKVVPRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDP 288

Query: 672  PIFSSEQMKEIEVMIPFLGALDISLNSEDIVTEKVIQIAERVNQNEYDVSAHIGYENVNS 493
            P+FS EQ+K +EV +P   +LD   +      E  I I   V   ++  +       +  
Sbjct: 289  PLFSPEQIKSVEVKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSSQLTP 348

Query: 492  LKKCILDSVSVESSEQNVPYIMLESLKTGVASYKGRGAXXXXXXXXXXXDAESLPSPTRE 313
              K   DS+      +N   I+ E L++GV+S KGRG            DA+SLPSPTRE
Sbjct: 349  SNKLASDSIPFGVKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTRE 408

Query: 312  TPPLLPIERALAFGDGVVRPEWSVPRPALDTQSTVVQSYETDALKAVSTYQQKFGRNSFL 133
             P +  ++++   G+       +  + A     +    YETDALKAVSTYQQKFGR+SF 
Sbjct: 409  APTIFSVQKS---GN-------APTKMAFPVDGSRSHPYETDALKAVSTYQQKFGRSSFS 458

Query: 132  MTNRLPSPTPSEESDNGEVDTGGEVSSSSILGNVNPINAPNLSK 1
            M +RLPSPTPSEE D G  D GGEVSSSSI   +  + + N+SK
Sbjct: 459  MADRLPSPTPSEEHDGGG-DIGGEVSSSSI---IRSLKSSNVSK 498


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  200 bits (508), Expect = 5e-49
 Identities = 119/342 (34%), Positives = 199/342 (58%)
 Frame = -1

Query: 1026 EAGLNNNVLCANKSDIDVNWNVETEERLNLIGQELETVTVNDVVKSFDGVCSRMQKLLDS 847
            E  L    +  + +D+ VN+  E     N I ++L++VT+++  KSF  VCS++Q  L +
Sbjct: 128  EGELEEGEIDLDSADLVVNFGKEA----NFIREQLQSVTLDETHKSFSMVCSKLQTSLLA 183

Query: 846  LGEITSENSVSNKAALVQKSFSAIQTVNCVFCSMSLNQKEQNRDTLLRLLVHITSQNPPI 667
            LGE+      ++   L+Q   +A++T+N VF SM+ +QK+QN D L RLL +  +Q P +
Sbjct: 184  LGELALSQDKND--ILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPAL 241

Query: 666  FSSEQMKEIEVMIPFLGALDISLNSEDIVTEKVIQIAERVNQNEYDVSAHIGYENVNSLK 487
             SSEQ+KE++ +I  +    +S N++D  T   I + + ++  +   S+    ++  S+ 
Sbjct: 242  LSSEQLKELDALILSINHSLVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVN 301

Query: 486  KCILDSVSVESSEQNVPYIMLESLKTGVASYKGRGAXXXXXXXXXXXDAESLPSPTRETP 307
            K  L  VS++SS      +  ES+K G+ + K +G            D ++LPSPTR+  
Sbjct: 302  KYDLGDVSIKSSGLKEQSVSSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIG 361

Query: 306  PLLPIERALAFGDGVVRPEWSVPRPALDTQSTVVQSYETDALKAVSTYQQKFGRNSFLMT 127
            P  P  +      G+V+ +  +   +LD  ++++  YETDALKAVS+YQQKFGR+S  ++
Sbjct: 362  PQFPATQT----HGMVKLDLPIFPASLDKGNSLLHPYETDALKAVSSYQQKFGRSSLFVS 417

Query: 126  NRLPSPTPSEESDNGEVDTGGEVSSSSILGNVNPINAPNLSK 1
              LPSPTPSEE D+G+ DTGGEV+S  ++ N + +N  ++ +
Sbjct: 418  ENLPSPTPSEEDDSGKGDTGGEVTSFDVVHNASHLNESSMGQ 459


>ref|XP_002297869.1| predicted protein [Populus trichocarpa] gi|222845127|gb|EEE82674.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  197 bits (502), Expect = 3e-48
 Identities = 131/322 (40%), Positives = 174/322 (54%), Gaps = 4/322 (1%)
 Frame = -1

Query: 966 NVETEERLNLIGQELETVTVNDVVKSFDGVCSRMQKLLDSLGEIT--SENSVSNKAALVQ 793
           +V+ E R+  I ++LE+V+V +  KSF+ VC ++ K+L+SL E+   ++NS  +K  LVQ
Sbjct: 68  SVDVENRVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQ 127

Query: 792 KSFSAIQTVNCVFCSMSLNQKEQNRDTLLRLLVHITSQNPPIFSSEQMKEIEVMIPFLGA 613
             F AI+ VN VFCSM+   KEQN+    R    + S  PP FS  Q KE+         
Sbjct: 128 LLFMAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV--------- 178

Query: 612 LDISLNSEDIVTEKVIQIAERVNQNEYDVSAHI-GYENVNSLKKCILDSVSVESSEQNVP 436
                                +N+N  D  A   GY+     +K      + E+  QN P
Sbjct: 179 ---------------------LNENHNDSLAKTAGYDLTTMSEKL----PAAETFVQNKP 213

Query: 435 YIMLESLKT-GVASYKGRGAXXXXXXXXXXXDAESLPSPTRETPPLLPIERALAFGDGVV 259
              +E+ K  GV S+K RG            D +SLPSPT+ET P  P++R LA GDG+V
Sbjct: 214 NKSIEAPKPPGVPSFKSRGVLLPLLDLKKYHDEDSLPSPTQETTPF-PVQRLLAIGDGMV 272

Query: 258 RPEWSVPRPALDTQSTVVQSYETDALKAVSTYQQKFGRNSFLMTNRLPSPTPSEESDNGE 79
                VP+     +   +  YETDALKAVS+YQQKF RNSF  TN LPSPTPSEES NG+
Sbjct: 273 SSGLPVPKVTPVAEEPRMHPYETDALKAVSSYQQKFNRNSF-FTNELPSPTPSEESGNGD 331

Query: 78  VDTGGEVSSSSILGNVNPINAP 13
            DT GEVSSSS + N   +N P
Sbjct: 332 GDTAGEVSSSSTVVNYRTVNPP 353


Top