BLASTX nr result

ID: Panax21_contig00009804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009804
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74293.1| hypothetical protein VITISV_015982 [Vitis vinifera]    99   4e-19
ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-l...    98   8e-19
emb|CBI34891.3| unnamed protein product [Vitis vinifera]               98   8e-19
ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, puta...    81   8e-14
emb|CAA63220.1| isocitrate dehydrogenase (NAD+) [Solanum tuberosum]    80   2e-13

>emb|CAN74293.1| hypothetical protein VITISV_015982 [Vitis vinifera]
          Length = 486

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/78 (62%), Positives = 59/78 (75%)
 Frame = +2

Query: 122 LTLKNPRLSLSSSPKIFNGVSSKNRLSVSTRFSNASVRCFVSAITAVDKVKVDNPIVEMD 301
           L LKNP LS+SS  + FNG+  KN  ++  RF NAS+RCF SA T  D+V+V NPIVEMD
Sbjct: 13  LALKNPNLSISSDQRFFNGILFKNGSTLHDRFPNASLRCFASAAT-FDRVRVQNPIVEMD 71

Query: 302 GDEMTRIIWTMIKEKLIF 355
           GDEM RI+W MIK+KLIF
Sbjct: 72  GDEMARIMWRMIKDKLIF 89


>ref|XP_002276200.2| PREDICTED: isocitrate dehydrogenase [NADP]-like [Vitis vinifera]
          Length = 486

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = +2

Query: 122 LTLKNPRLSLSSSPKIFNGVSSKNRLSVSTRFSNASVRCFVSAITAVDKVKVDNPIVEMD 301
           L LKNP LS+SS  + FNG+  KN   +  RF NAS+RCF SA T  D+V+V NPIVEMD
Sbjct: 26  LALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAAT-FDRVRVQNPIVEMD 84

Query: 302 GDEMTRIIWTMIKEKLIF 355
           GDEM RI+W MIK+KLIF
Sbjct: 85  GDEMARIMWRMIKDKLIF 102


>emb|CBI34891.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = +2

Query: 122 LTLKNPRLSLSSSPKIFNGVSSKNRLSVSTRFSNASVRCFVSAITAVDKVKVDNPIVEMD 301
           L LKNP LS+SS  + FNG+  KN   +  RF NAS+RCF SA T  D+V+V NPIVEMD
Sbjct: 80  LALKNPNLSISSDQRFFNGILFKNGSILHDRFPNASLRCFASAAT-FDRVRVQNPIVEMD 138

Query: 302 GDEMTRIIWTMIKEKLIF 355
           GDEM RI+W MIK+KLIF
Sbjct: 139 GDEMARIMWRMIKDKLIF 156


>ref|XP_002524672.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223536033|gb|EEF37691.1| NADP-specific isocitrate
           dehydrogenase, putative [Ricinus communis]
          Length = 470

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 7/77 (9%)
 Frame = +2

Query: 146 SLSSSPKIFNGVSSK-NRLSVSTRFSNASV--RCFVSAI----TAVDKVKVDNPIVEMDG 304
           S +SS  +FNG   K NRL+ S++F+NA+V  RCF S+     T  D+VKV NPIVEMDG
Sbjct: 33  SSNSSNLLFNGGLGKYNRLAFSSQFANAAVSLRCFASSSSSSSTGFDRVKVQNPIVEMDG 92

Query: 305 DEMTRIIWTMIKEKLIF 355
           DEMTR+IW MIK+KLIF
Sbjct: 93  DEMTRVIWRMIKDKLIF 109


>emb|CAA63220.1| isocitrate dehydrogenase (NAD+) [Solanum tuberosum]
          Length = 470

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/69 (53%), Positives = 53/69 (76%)
 Frame = +2

Query: 149 LSSSPKIFNGVSSKNRLSVSTRFSNASVRCFVSAITAVDKVKVDNPIVEMDGDEMTRIIW 328
           ++S+ ++FN     +R+S++TR  NAS+RCF S+     K++V NPIVEMDGDEMTR+IW
Sbjct: 27  VNSNRQLFN-----SRVSLTTRIPNASIRCFASSSGPTSKIRVQNPIVEMDGDEMTRVIW 81

Query: 329 TMIKEKLIF 355
            MIK+KLI+
Sbjct: 82  KMIKDKLIY 90


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