BLASTX nr result
ID: Panax21_contig00009795
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00009795 (445 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu... 128 6e-28 ref|XP_003532674.1| PREDICTED: uncharacterized protein LOC100785... 128 6e-28 ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ... 127 1e-27 ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 125 3e-27 ref|XP_003525404.1| PREDICTED: uncharacterized protein LOC100800... 124 1e-26 >ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 128 bits (321), Expect = 6e-28 Identities = 64/82 (78%), Positives = 71/82 (86%), Gaps = 2/82 (2%) Frame = -3 Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHH-TDKRAPLQPPVR 270 GGRDAITKN VL EDQLP KFL+PKTKKK +K+ D+ FA + F HH TDKRAPLQPPVR Sbjct: 535 GGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVR 594 Query: 269 KALSVFSGKRNPNDNHYSRSKH 204 +AL+VFSGKRNPNDNHYSRSKH Sbjct: 595 QALAVFSGKRNPNDNHYSRSKH 616 >ref|XP_003532674.1| PREDICTED: uncharacterized protein LOC100785714 [Glycine max] Length = 634 Score = 128 bits (321), Expect = 6e-28 Identities = 55/80 (68%), Positives = 68/80 (85%) Frame = -3 Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKKSKEEDDIFATNHIFLHHTDKRAPLQPPVRKA 264 GGRDA++KN +L EDQLP + LYPKTKK +K++DD F + +F HHTDK+AP QPPVRKA Sbjct: 554 GGRDAVSKNLILREDQLPHRVLYPKTKKANKQDDDFFTPDSVFSHHTDKKAPFQPPVRKA 613 Query: 263 LSVFSGKRNPNDNHYSRSKH 204 ++VF G+RNPNDNHYSRSKH Sbjct: 614 MAVFGGRRNPNDNHYSRSKH 633 >ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis] gi|223549677|gb|EEF51165.1| RNA-binding protein nob1, putative [Ricinus communis] Length = 628 Score = 127 bits (319), Expect = 1e-27 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 1/81 (1%) Frame = -3 Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHHTDKRAPLQPPVRK 267 GGRDAITKN +L EDQLP K LYPKTKKK +K+ DD FA + IF HHTDKRAP +PP+RK Sbjct: 548 GGRDAITKNLILREDQLPQKLLYPKTKKKVNKQGDDFFAVDDIFSHHTDKRAPFRPPIRK 607 Query: 266 ALSVFSGKRNPNDNHYSRSKH 204 AL+VFSG+RNPNDNHYSR K+ Sbjct: 608 ALAVFSGRRNPNDNHYSRPKN 628 >ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 125 bits (315), Expect = 3e-27 Identities = 63/82 (76%), Positives = 70/82 (85%), Gaps = 2/82 (2%) Frame = -3 Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHH-TDKRAPLQPPVR 270 GGRDAITKN VL EDQLP KFL+P TKKK +K+ D+ FA + F HH TDKRAPLQPPVR Sbjct: 535 GGRDAITKNLVLREDQLPQKFLHPXTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVR 594 Query: 269 KALSVFSGKRNPNDNHYSRSKH 204 +AL+VFSGKRNPNDNHYSRSKH Sbjct: 595 QALAVFSGKRNPNDNHYSRSKH 616 >ref|XP_003525404.1| PREDICTED: uncharacterized protein LOC100800291 [Glycine max] Length = 632 Score = 124 bits (310), Expect = 1e-26 Identities = 54/79 (68%), Positives = 66/79 (83%) Frame = -3 Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKKSKEEDDIFATNHIFLHHTDKRAPLQPPVRKA 264 GGRDA+TKN +L EDQLP + LYPK KK +K++DD F + +F HH DK+AP QPPVRKA Sbjct: 553 GGRDAVTKNLILREDQLPQRVLYPKMKKANKQDDDFFTPDSVFSHHIDKKAPFQPPVRKA 612 Query: 263 LSVFSGKRNPNDNHYSRSK 207 ++VFSG+RNPNDNHYSRSK Sbjct: 613 MAVFSGRRNPNDNHYSRSK 631