BLASTX nr result

ID: Panax21_contig00009795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009795
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu...   128   6e-28
ref|XP_003532674.1| PREDICTED: uncharacterized protein LOC100785...   128   6e-28
ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ...   127   1e-27
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   125   3e-27
ref|XP_003525404.1| PREDICTED: uncharacterized protein LOC100800...   124   1e-26

>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
          Length = 617

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/82 (78%), Positives = 71/82 (86%), Gaps = 2/82 (2%)
 Frame = -3

Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHH-TDKRAPLQPPVR 270
           GGRDAITKN VL EDQLP KFL+PKTKKK +K+ D+ FA +  F HH TDKRAPLQPPVR
Sbjct: 535 GGRDAITKNLVLREDQLPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVR 594

Query: 269 KALSVFSGKRNPNDNHYSRSKH 204
           +AL+VFSGKRNPNDNHYSRSKH
Sbjct: 595 QALAVFSGKRNPNDNHYSRSKH 616


>ref|XP_003532674.1| PREDICTED: uncharacterized protein LOC100785714 [Glycine max]
          Length = 634

 Score =  128 bits (321), Expect = 6e-28
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = -3

Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKKSKEEDDIFATNHIFLHHTDKRAPLQPPVRKA 264
           GGRDA++KN +L EDQLP + LYPKTKK +K++DD F  + +F HHTDK+AP QPPVRKA
Sbjct: 554 GGRDAVSKNLILREDQLPHRVLYPKTKKANKQDDDFFTPDSVFSHHTDKKAPFQPPVRKA 613

Query: 263 LSVFSGKRNPNDNHYSRSKH 204
           ++VF G+RNPNDNHYSRSKH
Sbjct: 614 MAVFGGRRNPNDNHYSRSKH 633


>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
           gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
           putative [Ricinus communis]
          Length = 628

 Score =  127 bits (319), Expect = 1e-27
 Identities = 60/81 (74%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
 Frame = -3

Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHHTDKRAPLQPPVRK 267
           GGRDAITKN +L EDQLP K LYPKTKKK +K+ DD FA + IF HHTDKRAP +PP+RK
Sbjct: 548 GGRDAITKNLILREDQLPQKLLYPKTKKKVNKQGDDFFAVDDIFSHHTDKRAPFRPPIRK 607

Query: 266 ALSVFSGKRNPNDNHYSRSKH 204
           AL+VFSG+RNPNDNHYSR K+
Sbjct: 608 ALAVFSGRRNPNDNHYSRPKN 628


>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
           [Cucumis sativus]
          Length = 617

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/82 (76%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
 Frame = -3

Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKK-SKEEDDIFATNHIFLHH-TDKRAPLQPPVR 270
           GGRDAITKN VL EDQLP KFL+P TKKK +K+ D+ FA +  F HH TDKRAPLQPPVR
Sbjct: 535 GGRDAITKNLVLREDQLPQKFLHPXTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVR 594

Query: 269 KALSVFSGKRNPNDNHYSRSKH 204
           +AL+VFSGKRNPNDNHYSRSKH
Sbjct: 595 QALAVFSGKRNPNDNHYSRSKH 616


>ref|XP_003525404.1| PREDICTED: uncharacterized protein LOC100800291 [Glycine max]
          Length = 632

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/79 (68%), Positives = 66/79 (83%)
 Frame = -3

Query: 443 GGRDAITKNPVLGEDQLPPKFLYPKTKKKSKEEDDIFATNHIFLHHTDKRAPLQPPVRKA 264
           GGRDA+TKN +L EDQLP + LYPK KK +K++DD F  + +F HH DK+AP QPPVRKA
Sbjct: 553 GGRDAVTKNLILREDQLPQRVLYPKMKKANKQDDDFFTPDSVFSHHIDKKAPFQPPVRKA 612

Query: 263 LSVFSGKRNPNDNHYSRSK 207
           ++VFSG+RNPNDNHYSRSK
Sbjct: 613 MAVFSGRRNPNDNHYSRSK 631


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