BLASTX nr result

ID: Panax21_contig00009794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009794
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ...   207   9e-52
ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu...   206   2e-51
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   204   8e-51
ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi...   202   2e-50
emb|CBI34688.3| unnamed protein product [Vitis vinifera]              202   2e-50

>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
           gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
           putative [Ricinus communis]
          Length = 628

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/124 (79%), Positives = 107/124 (86%)
 Frame = -3

Query: 445 CPKCGNGGTLRKVAVTVGENGIVLAGRRPRISLRGTKFSLPMPHGGRDAITKNPVLREDQ 266
           CPKCGNGGTLRKVA+TVGENGIVLA  RPRISLRGTKFSLP+P GGRDAITKN +LREDQ
Sbjct: 504 CPKCGNGGTLRKVAITVGENGIVLADCRPRISLRGTKFSLPLPQGGRDAITKNLILREDQ 563

Query: 265 LPQKFLYPKKTKKKSNQEDDVFATNHIFLHHTDKRAPLQPPVRKALAVFSGKRNPNDNHF 86
           LPQK LYPK  KK + Q DD FA + IF HHTDKRAP +PP+RKALAVFSG+RNPNDNH+
Sbjct: 564 LPQKLLYPKTKKKVNKQGDDFFAVDDIFSHHTDKRAPFRPPIRKALAVFSGRRNPNDNHY 623

Query: 85  SGSK 74
           S  K
Sbjct: 624 SRPK 627


>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
          Length = 617

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/125 (80%), Positives = 110/125 (88%), Gaps = 1/125 (0%)
 Frame = -3

Query: 445 CPKCGNGGTLRKVAVTVGENGIVLAGRRPRISLRGTKFSLPMPHGGRDAITKNPVLREDQ 266
           CPKCGNGGTLRKVAVTVGENG+VLA R+PRI+LRGTKFSLP+P GGRDAITKN VLREDQ
Sbjct: 491 CPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAITKNLVLREDQ 550

Query: 265 LPQKFLYPKKTKKKSNQEDDVFATNHIFLHH-TDKRAPLQPPVRKALAVFSGKRNPNDNH 89
           LPQKFL+PK  KK + Q D+ FA +  F HH TDKRAPLQPPVR+ALAVFSGKRNPNDNH
Sbjct: 551 LPQKFLHPKTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVFSGKRNPNDNH 610

Query: 88  FSGSK 74
           +S SK
Sbjct: 611 YSRSK 615


>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
           [Cucumis sativus]
          Length = 617

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/125 (79%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
 Frame = -3

Query: 445 CPKCGNGGTLRKVAVTVGENGIVLAGRRPRISLRGTKFSLPMPHGGRDAITKNPVLREDQ 266
           CPKCGNGGTLRKVAVTVGENG+VLA R+PRI+LRGTKFSLP+P GGRDAITKN VLREDQ
Sbjct: 491 CPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLPLPQGGRDAITKNLVLREDQ 550

Query: 265 LPQKFLYPKKTKKKSNQEDDVFATNHIFLHH-TDKRAPLQPPVRKALAVFSGKRNPNDNH 89
           LPQKFL+P   KK + Q D+ FA +  F HH TDKRAPLQPPVR+ALAVFSGKRNPNDNH
Sbjct: 551 LPQKFLHPXTKKKVNKQGDEFFAVDDFFSHHNTDKRAPLQPPVRQALAVFSGKRNPNDNH 610

Query: 88  FSGSK 74
           +S SK
Sbjct: 611 YSRSK 615


>ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]
          Length = 633

 Score =  202 bits (515), Expect = 2e-50
 Identities = 94/125 (75%), Positives = 108/125 (86%)
 Frame = -3

Query: 445 CPKCGNGGTLRKVAVTVGENGIVLAGRRPRISLRGTKFSLPMPHGGRDAITKNPVLREDQ 266
           CP+CGNGGTLRKVAVTVGENGI+LA R+PRISLRGTKFSLP+P GGRDAITKNP+LREDQ
Sbjct: 509 CPRCGNGGTLRKVAVTVGENGIILAARKPRISLRGTKFSLPLPRGGRDAITKNPILREDQ 568

Query: 265 LPQKFLYPKKTKKKSNQEDDVFATNHIFLHHTDKRAPLQPPVRKALAVFSGKRNPNDNHF 86
           LP K L+PK  KK +   D+ FA++  F HHTDK+  L+PPVR+ALAVFSGKRNPNDNHF
Sbjct: 569 LPHKLLHPKTKKKANKPGDEFFASDDFFSHHTDKKTSLRPPVREALAVFSGKRNPNDNHF 628

Query: 85  SGSKQ 71
           S SK+
Sbjct: 629 SRSKR 633


>emb|CBI34688.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  202 bits (515), Expect = 2e-50
 Identities = 94/125 (75%), Positives = 108/125 (86%)
 Frame = -3

Query: 445 CPKCGNGGTLRKVAVTVGENGIVLAGRRPRISLRGTKFSLPMPHGGRDAITKNPVLREDQ 266
           CP+CGNGGTLRKVAVTVGENGI+LA R+PRISLRGTKFSLP+P GGRDAITKNP+LREDQ
Sbjct: 436 CPRCGNGGTLRKVAVTVGENGIILAARKPRISLRGTKFSLPLPRGGRDAITKNPILREDQ 495

Query: 265 LPQKFLYPKKTKKKSNQEDDVFATNHIFLHHTDKRAPLQPPVRKALAVFSGKRNPNDNHF 86
           LP K L+PK  KK +   D+ FA++  F HHTDK+  L+PPVR+ALAVFSGKRNPNDNHF
Sbjct: 496 LPHKLLHPKTKKKANKPGDEFFASDDFFSHHTDKKTSLRPPVREALAVFSGKRNPNDNHF 555

Query: 85  SGSKQ 71
           S SK+
Sbjct: 556 SRSKR 560


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