BLASTX nr result

ID: Panax21_contig00009789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009789
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   163   5e-38
emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]   162   9e-38
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   153   6e-35
ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...   152   7e-35
ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   139   8e-31

>ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Vitis
            vinifera]
          Length = 950

 Score =  163 bits (412), Expect = 5e-38
 Identities = 110/284 (38%), Positives = 157/284 (55%), Gaps = 12/284 (4%)
 Frame = +2

Query: 38   SVTKEINDEVALENDVLLQNALEFSRQDP-----LHCLEETSLSD--DPIMTSEINDLSD 196
            SV+K I+     EN  + +N  E           L C +  +  D  DP    ++++++ 
Sbjct: 397  SVSKNISTSEEFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNVA- 455

Query: 197  DPINTSEICDTLGIQDSVVKDAAPNDDFSRVSSEYGNQVIPK--DPTLEMDY-ERNSWDE 367
                 S+  D   IQDS  +D   ND   + +SE+ +QV P   +P L++D    NSW+E
Sbjct: 456  -----SQNKDVSVIQDSGNQDNVQNDVLLQNASEFSSQVYPHKGEPNLKIDSCSANSWEE 510

Query: 368  ERRLHVQSSEILLLPYKEDTLTSAETLNGKDGVTLFPVGCERDSLDFGVFGDLFNEPENA 547
            E  + +QSSE+LLLPYKE+T T+ E   G+ G ++   G   + LDF  FG LF+EPE A
Sbjct: 511  ELPVQIQSSEVLLLPYKEETSTAVEITTGQVGPSVVS-GSNEELLDFDGFGGLFDEPEAA 569

Query: 548  AGPAMRSP-SNNVSESNEAAETGITVGNSSGSDLDEIDDTDSPVSVERCLAYFTKPELLS 724
            +G  ++    +N   +NE   TG    NSS SD DE+D+++S VS++ CL YFTKPELLS
Sbjct: 570  SGVNLQPLLGDNSFNANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLS 629

Query: 725  KNEHAWHCENCSKTLVXXXXXXXXXXXXT-SIVSLNRGESKIRD 853
             NEHAWHCENCSK L             T S + +N  E KI++
Sbjct: 630  -NEHAWHCENCSKILWDQRIKTRTNLPNTISKIQMNGSEGKIQN 672


>emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]
          Length = 1036

 Score =  162 bits (410), Expect = 9e-38
 Identities = 110/284 (38%), Positives = 157/284 (55%), Gaps = 12/284 (4%)
 Frame = +2

Query: 38   SVTKEINDEVALENDVLLQNALEFSRQDP-----LHCLEETSLSD--DPIMTSEINDLSD 196
            SV+K I+     EN  + +N  E           L C +  +  D  DP    ++++++ 
Sbjct: 483  SVSKNISTSEEFENKQVFENVTETKAAPSDDFTLLDCSDTFTWLDYLDPGAVLDVHNVA- 541

Query: 197  DPINTSEICDTLGIQDSVVKDAAPNDDFSRVSSEYGNQVIPK--DPTLEMDY-ERNSWDE 367
                 S+  D   IQDS  +D   ND   + +SE+  QV P   +P L++D    NSW+E
Sbjct: 542  -----SQNKDVSVIQDSGNQDNVQNDVLLQNASEFSCQVYPHKGEPNLKIDSCSANSWEE 596

Query: 368  ERRLHVQSSEILLLPYKEDTLTSAETLNGKDGVTLFPVGCERDSLDFGVFGDLFNEPENA 547
            E  + +QSSE+LLLPYKE+T T+ E   G+ G ++   G   + LDF  FG LF+EPE A
Sbjct: 597  ELPVQIQSSEVLLLPYKEETSTAVEITTGQVGPSVVS-GSNEELLDFDGFGGLFDEPEAA 655

Query: 548  AGPAMRSP-SNNVSESNEAAETGITVGNSSGSDLDEIDDTDSPVSVERCLAYFTKPELLS 724
            +G  ++    +N  ++NE   TG    NSS SD DE+D+++S VS++ CL YFTKPELLS
Sbjct: 656  SGVNLQPLLGDNSFDANEVVGTGFINRNSSESDPDEVDNSNSMVSIDSCLTYFTKPELLS 715

Query: 725  KNEHAWHCENCSKTLVXXXXXXXXXXXXT-SIVSLNRGESKIRD 853
             NEHAWHCENCSK L             T S + +N  E KI++
Sbjct: 716  -NEHAWHCENCSKILRDQRIKTRTNLPNTISKIQMNGSEDKIQN 758


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 980

 Score =  153 bits (386), Expect = 6e-35
 Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 3/185 (1%)
 Frame = +2

Query: 224  DTLGIQDSVVKDAAPNDDFSRVSSEYGNQV--IPKDPTLEMDYER-NSWDEERRLHVQSS 394
            D   +QD+  KD   N+   + + E    V  + +D  L   +   N W++E  L VQ S
Sbjct: 524  DAPEVQDTESKDECLNELHGQATCESSGPVCFLKEDQNLSPTFSSANGWEDEVPLQVQGS 583

Query: 395  EILLLPYKEDTLTSAETLNGKDGVTLFPVGCERDSLDFGVFGDLFNEPENAAGPAMRSPS 574
            E+LLLPYKE++ ++AE + G    +   +G  ++ L+F  FGDLFNEPE  AGPA R   
Sbjct: 584  EVLLLPYKEESSSAAEIIGGDGEGSSSVLGGGQEELEFDGFGDLFNEPEVVAGPAPRP-- 641

Query: 575  NNVSESNEAAETGITVGNSSGSDLDEIDDTDSPVSVERCLAYFTKPELLSKNEHAWHCEN 754
               S  +E  E G  +G++S SD DE+DDTDSPVSVE CLA+F KPELLS +E+AWHCEN
Sbjct: 642  ---SSCSEVMEAGFIIGSNSESDPDEVDDTDSPVSVESCLAHFIKPELLS-DENAWHCEN 697

Query: 755  CSKTL 769
            CSK L
Sbjct: 698  CSKVL 702


>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
            gi|223542682|gb|EEF44219.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1006

 Score =  152 bits (385), Expect = 7e-35
 Identities = 84/170 (49%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
 Frame = +2

Query: 266  PNDDFSRVSSEYGNQVIPKD--PTLEMDYERNSWDEERRLHVQSSEILLLPYKEDTLTSA 439
            PNDD    S     QV P D  P L+++   N W+EE    V+SSE+LLLPYKE+++   
Sbjct: 545  PNDDIMESS-----QVSPVDGEPNLKLESSVNPWEEEVLAQVKSSEVLLLPYKEESVMDG 599

Query: 440  ETLNGKDGVTLFPVGCERDSLDFGVFGDLFNEPENAAGPAMRSPSNNVSESNEAAETGIT 619
            + + G+   +   VGC +D  DF  FGDLFNEPE ++GP      +  S +N  AETG  
Sbjct: 600  DVMKGQAEASSV-VGCGQDEADFDGFGDLFNEPEVSSGPV-----SGPSLANGTAETGFI 653

Query: 620  VGNSSGSDLDEIDDTDSPVSVERCLAYFTKPELLSKNEHAWHCENCSKTL 769
              N+S SD DE+D++DSPVS+E CLA+F KPELLS N++AW CENCSKTL
Sbjct: 654  AANNSESDPDEVDNSDSPVSIESCLAHFIKPELLS-NDNAWECENCSKTL 702


>ref|XP_003537512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 1052

 Score =  139 bits (350), Expect = 8e-31
 Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
 Frame = +2

Query: 224  DTLGIQDSVVKDAAPNDDFSRVSSEYGNQV--IPKDPTLEMDYER-NSWDEERRLHVQSS 394
            D   +Q +  KD   N+   +   E    V  + +D  L   +   N W+++  L VQ S
Sbjct: 595  DAPEVQGTESKDECLNELHGQAICESSGLVCFLKEDENLSPKFSSANGWEDKVPLQVQGS 654

Query: 395  EILLLPYKEDTLTSAETLNGKDGVTLFPVGCERDSLDFGVFGDLFNEPENAAGPAMRSPS 574
            E+LLLPYKE++ ++AE + G    +   +G  ++ ++F  FGDLFNEPE  AGPA R   
Sbjct: 655  EVLLLPYKEESSSAAEIIGGDGEASSSVLGGGQEEVEFDGFGDLFNEPEVVAGPAPRP-- 712

Query: 575  NNVSESNEAAETGITVGNSSGSDLDEIDDTDSPVSVERCLAYFTKPELLSKNEHAWHCEN 754
               S   E  E G  + NS  SD DE+DDTDSPVSVE CLA+F KPELL  +E+AWHCEN
Sbjct: 713  ---SSCREVMEAGFIISNSE-SDPDEVDDTDSPVSVESCLAHFIKPELL-LDENAWHCEN 767

Query: 755  CSKTL 769
            CSK L
Sbjct: 768  CSKFL 772


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