BLASTX nr result

ID: Panax21_contig00009748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009748
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...   317   2e-84
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   316   3e-84
emb|CBI37995.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin...   298   6e-79
ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2...   288   6e-76

>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score =  317 bits (812), Expect = 2e-84
 Identities = 151/247 (61%), Positives = 199/247 (80%)
 Frame = +3

Query: 3    EEHAPQTNLNEYAAIDVHNINLIYLRRSLMENLIEDKEKFHDNVVGSVVRIRISGGEQKQ 182
            +E   Q+NL++YAAID+HNINLIYL+R+L+E LIED+E FHD VVGS VRIRISG  QKQ
Sbjct: 533  DERGLQSNLDDYAAIDIHNINLIYLKRNLVEYLIEDEESFHDKVVGSFVRIRISGSAQKQ 592

Query: 183  DMYRLVQVVGTTKVSVPYKISNRTADVMLEVLNLDKKEAVLIDAISNQDFSEEECRRLRQ 362
            D+YRLVQVVGT+K S PYK+  R  D++LE+LNL+K E V ID ISNQ+F+E+EC+RLRQ
Sbjct: 593  DLYRLVQVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTEDECKRLRQ 652

Query: 363  SIKCGLVKRFTVGEIQGKAMELQAVRLNDWLESEILRLNHLRDRASENGRKKELRECVEK 542
            S+KCG++ R TVG++Q +AM LQ  R+ DW+E+EI+RL+HLRDRASE GR+KELRECVEK
Sbjct: 653  SMKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRKELRECVEK 712

Query: 543  LQLLKTPEERQRRLCKIPDVNCDPNMDPNYESDEDAGKLDNRKQDFAGEYVKPRYSGYNR 722
            LQLLKTPEERQRR+ +IP+++ DPNMDP++ES+++    D R++     Y   R + + R
Sbjct: 713  LQLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRE----TYTLSRSTSFGR 768

Query: 723  EGSKPIS 743
               +P+S
Sbjct: 769  RTREPVS 775


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score =  316 bits (810), Expect = 3e-84
 Identities = 151/246 (61%), Positives = 198/246 (80%)
 Frame = +3

Query: 6    EHAPQTNLNEYAAIDVHNINLIYLRRSLMENLIEDKEKFHDNVVGSVVRIRISGGEQKQD 185
            E   Q+NL++YAAID+HNINLIYL+R+L+E LIED+E FHD VVGS VRIRISG  QKQD
Sbjct: 534  ERGLQSNLDDYAAIDIHNINLIYLKRNLVEYLIEDEESFHDKVVGSFVRIRISGSAQKQD 593

Query: 186  MYRLVQVVGTTKVSVPYKISNRTADVMLEVLNLDKKEAVLIDAISNQDFSEEECRRLRQS 365
            +YRLVQVVGT+K S PYK+  R  D++LE+LNL+K E V ID ISNQ+F+E+EC+RLRQS
Sbjct: 594  LYRLVQVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTEDECKRLRQS 653

Query: 366  IKCGLVKRFTVGEIQGKAMELQAVRLNDWLESEILRLNHLRDRASENGRKKELRECVEKL 545
            +KCG++ R TVG++Q +AM LQ  R+ DW+E+EI+RL+HLRDRASE GR+KELRECVEKL
Sbjct: 654  MKCGIINRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDRASEKGRRKELRECVEKL 713

Query: 546  QLLKTPEERQRRLCKIPDVNCDPNMDPNYESDEDAGKLDNRKQDFAGEYVKPRYSGYNRE 725
            QLLKTPEERQRR+ +IP+++ DPNMDP++ES+++    D R++     Y   R + + R 
Sbjct: 714  QLLKTPEERQRRIEEIPEIHADPNMDPSHESEDEDEADDKRRE----TYTLSRSTSFGRR 769

Query: 726  GSKPIS 743
              +P+S
Sbjct: 770  TREPVS 775


>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  303 bits (777), Expect = 2e-80
 Identities = 158/282 (56%), Positives = 202/282 (71%), Gaps = 33/282 (11%)
 Frame = +3

Query: 3    EEHAPQTNLNEYAAIDVHNINLIYLRRSLMENLIEDKEKFHDNVVGSVVRIRISGGEQKQ 182
            +E   Q+NL++YAAID+HNI+LIYLRR+LME+LIED EK HD VVG+ VRIRISG  QKQ
Sbjct: 467  DERGSQSNLDDYAAIDIHNISLIYLRRNLMEDLIEDTEKLHDKVVGAFVRIRISGSGQKQ 526

Query: 183  DMYRLVQVVGTTKVSVPYKISNRTADVMLEVLNLDKKEAVLIDAISNQDFSEEECRRLRQ 362
            D+YRLVQVVGT+K + PYK+  RT +VMLE+LNL K E + ID ISNQ+F+E+EC RLRQ
Sbjct: 527  DVYRLVQVVGTSKAADPYKVGKRTTEVMLEILNLSKTEIISIDIISNQEFTEDECMRLRQ 586

Query: 363  SIKCGLVKRFTVGEIQGKAMELQAVRLNDWLESEILRLNHLRDRASENGRKKE------- 521
            SIKCGL+   TVG I  KA+ LQAVR+ DWLE+EI+RL+HLRDRASE GR+KE       
Sbjct: 587  SIKCGLITPLTVGGILEKALALQAVRVKDWLETEIVRLSHLRDRASEKGRRKEYPFFVQL 646

Query: 522  --------------------------LRECVEKLQLLKTPEERQRRLCKIPDVNCDPNMD 623
                                        ECVEKLQ LKT EERQRRL +IP+V+ DPNMD
Sbjct: 647  MHSSIIILNMQVASCYHMSYFLKTLPFWECVEKLQRLKTAEERQRRLEEIPEVHADPNMD 706

Query: 624  PNYESDEDAGKLDNRKQDFAGEYVKPRYSGYNREGSKPISLR 749
            P+YES+ED  + D+++Q+    +++PR +G++R+  +P S R
Sbjct: 707  PSYESEEDESETDDKRQE---NHLRPRDTGFSRKRMEPSSSR 745


>ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
            [Glycine max]
          Length = 1953

 Score =  298 bits (764), Expect = 6e-79
 Identities = 157/242 (64%), Positives = 187/242 (77%), Gaps = 8/242 (3%)
 Frame = +3

Query: 24   NLNEYAAIDVHNINLIYLRRSLMENLIEDKEKFHDNVVGSVVRIRISGGEQKQDMYRLVQ 203
            N + YAAIDVHNINLIY+RRSLMENL ED EK H+ VVGS VRIRIS  +QKQDMYRLVQ
Sbjct: 421  NPDAYAAIDVHNINLIYMRRSLMENLTEDTEKIHEKVVGSFVRIRISSNDQKQDMYRLVQ 480

Query: 204  VVGTTKVSVPYKISNRTADVMLEVLNLDKKEAVLIDAISNQDFSEEECRRLRQSIKCGLV 383
            VVGT+KV+ PYKI  RT D+ LE+LNL++KE + I  ISNQ+FSE+EC+RLRQSIK GL 
Sbjct: 481  VVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIAEISNQEFSEDECKRLRQSIKYGLS 540

Query: 384  KRFTVGEIQGKAMELQAVRLNDWLESEILRLNHLRDRASENGRKKE--------LRECVE 539
            KR TVGEI  KA+ LQA+R+ND LE+EILRLNHLRDRASE G +KE          E VE
Sbjct: 541  KRLTVGEILNKAVTLQAIRVNDLLEAEILRLNHLRDRASEKGHRKEYPLPFTTLFFEYVE 600

Query: 540  KLQLLKTPEERQRRLCKIPDVNCDPNMDPNYESDEDAGKLDNRKQDFAGEYVKPRYSGYN 719
            KLQLL +PEERQRR  +IPDV+ DPN+D  +ESDED G+ D RKQD     +  +Y G++
Sbjct: 601  KLQLLNSPEERQRRQHEIPDVHSDPNLDSMFESDEDDGESDERKQD---SNIFSKYLGFD 657

Query: 720  RE 725
            R+
Sbjct: 658  RK 659


>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
            predicted protein [Populus trichocarpa]
          Length = 1256

 Score =  288 bits (738), Expect = 6e-76
 Identities = 146/226 (64%), Positives = 178/226 (78%), Gaps = 2/226 (0%)
 Frame = +3

Query: 3    EEHAPQTNLN--EYAAIDVHNINLIYLRRSLMENLIEDKEKFHDNVVGSVVRIRISGGEQ 176
            +E  PQ N N  EYAAIDVHNI+L+YL+RSLMENL++D  KFH+ VVGS VRIRISGG+Q
Sbjct: 369  DERGPQINCNPEEYAAIDVHNISLLYLKRSLMENLMDDAGKFHEKVVGSFVRIRISGGDQ 428

Query: 177  KQDMYRLVQVVGTTKVSVPYKISNRTADVMLEVLNLDKKEAVLIDAISNQDFSEEECRRL 356
            KQDMYRLVQVVG  K +  YK+  +T D MLE+LNLDKKE + ID ISNQDFSE EC+RL
Sbjct: 429  KQDMYRLVQVVGIGKAAESYKVGTKTTDDMLEILNLDKKEVISIDGISNQDFSEGECKRL 488

Query: 357  RQSIKCGLVKRFTVGEIQGKAMELQAVRLNDWLESEILRLNHLRDRASENGRKKELRECV 536
            RQSIKCGL+KR TV  IQ +AM +Q  ++ D LE +ILRLNHLRDRA          +CV
Sbjct: 489  RQSIKCGLIKRLTVVSIQKRAMAIQDAKVRDRLEEDILRLNHLRDRA----------KCV 538

Query: 537  EKLQLLKTPEERQRRLCKIPDVNCDPNMDPNYESDEDAGKLDNRKQ 674
            EKL+LLK+PEERQRRL +IPDV+ DPNM+P+Y+S+ED+G+   +KQ
Sbjct: 539  EKLELLKSPEERQRRLLEIPDVHADPNMNPSYDSEEDSGESHKKKQ 584


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