BLASTX nr result

ID: Panax21_contig00009731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009731
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633348.1| PREDICTED: thymidine kinase-like [Vitis vini...   121   1e-25
emb|CBI28409.3| unnamed protein product [Vitis vinifera]              121   1e-25
ref|NP_001234713.1| TK1-like deoxyribonucleoside kinase [Solanum...   115   5e-25
ref|XP_002533863.1| thymidine kinase, putative [Ricinus communis...   117   2e-24
ref|XP_002307900.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24

>ref|XP_003633348.1| PREDICTED: thymidine kinase-like [Vitis vinifera]
          Length = 234

 Score =  121 bits (304), Expect = 1e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
 Frame = +3

Query: 234 HDICSQFSRHLIKLI---------RRRSFGSVLDIIPLADTITKLTARCELCGKRAFFTL 386
           +D C + + H  K +          RRSFGSVLD+IPLAD++TKLTARCELCGKRAFFTL
Sbjct: 117 YDFCCEVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTL 176

Query: 387 RKIDDSQTELIGGADVYMPVCHQHYVNRQS 476
           RKI++ QTELIGGAD+YMPVC QHYVN Q+
Sbjct: 177 RKIEEMQTELIGGADIYMPVCRQHYVNGQA 206



 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   LEVIGIDEAQFFDDLYDFCRKAADNDGKTIVIAGLDGDYLR 124
           LEVIGIDEAQFF+DLYDFC + AD+DGKT+++AGLDGDYLR
Sbjct: 102 LEVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGLDGDYLR 142


>emb|CBI28409.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  121 bits (304), Expect = 1e-25
 Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
 Frame = +3

Query: 234 HDICSQFSRHLIKLI---------RRRSFGSVLDIIPLADTITKLTARCELCGKRAFFTL 386
           +D C + + H  K +          RRSFGSVLD+IPLAD++TKLTARCELCGKRAFFTL
Sbjct: 85  YDFCCEVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCELCGKRAFFTL 144

Query: 387 RKIDDSQTELIGGADVYMPVCHQHYVNRQS 476
           RKI++ QTELIGGAD+YMPVC QHYVN Q+
Sbjct: 145 RKIEEMQTELIGGADIYMPVCRQHYVNGQA 174



 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   LEVIGIDEAQFFDDLYDFCRKAADNDGKTIVIAGLDGDYLR 124
           LEVIGIDEAQFF+DLYDFC + AD+DGKT+++AGLDGDYLR
Sbjct: 70  LEVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGLDGDYLR 110


>ref|NP_001234713.1| TK1-like deoxyribonucleoside kinase [Solanum lycopersicum]
           gi|33325041|gb|AAQ08180.1| TK1-like deoxyribonucleoside
           kinase [Solanum lycopersicum]
          Length = 234

 Score =  115 bits (288), Expect(2) = 5e-25
 Identities = 52/65 (80%), Positives = 60/65 (92%)
 Frame = +3

Query: 282 RRSFGSVLDIIPLADTITKLTARCELCGKRAFFTLRKIDDSQTELIGGADVYMPVCHQHY 461
           R+SFGSVLDIIPLADT+TKLTARCELC +RAFFT RK ++++TELIGGAD+YMPVC QHY
Sbjct: 143 RKSFGSVLDIIPLADTVTKLTARCELCNRRAFFTFRKTNETETELIGGADIYMPVCRQHY 202

Query: 462 VNRQS 476
           VN QS
Sbjct: 203 VNGQS 207



 Score = 24.6 bits (52), Expect(2) = 5e-25
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +1

Query: 472 KAVKEAARVVLESHQKVQSDHTLEAAAV 555
           ++V E+A++VLESH KV ++  LE+  V
Sbjct: 206 QSVNESAKMVLESH-KVSNELILESPLV 232



 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   LEVIGIDEAQFFDDLYDFCRKAADNDGKTIVIAGLDGDYLR 124
           ++VIGIDEAQFF DLY+FC  AAD DGK IV+AGLDGDYLR
Sbjct: 103 VDVIGIDEAQFFGDLYEFCCNAADFDGKIIVVAGLDGDYLR 143


>ref|XP_002533863.1| thymidine kinase, putative [Ricinus communis]
           gi|223526185|gb|EEF28513.1| thymidine kinase, putative
           [Ricinus communis]
          Length = 234

 Score =  117 bits (292), Expect = 2e-24
 Identities = 58/89 (65%), Positives = 68/89 (76%), Gaps = 9/89 (10%)
 Frame = +3

Query: 234 HDICSQFSRHLIKLI---------RRRSFGSVLDIIPLADTITKLTARCELCGKRAFFTL 386
           +D CS+ + H  K +          RRSFGSVLD+IPLAD +TKLTARCELCGKRAFFTL
Sbjct: 117 YDFCSKAADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADNVTKLTARCELCGKRAFFTL 176

Query: 387 RKIDDSQTELIGGADVYMPVCHQHYVNRQ 473
           RK  ++QTELIGGAD+YMPVC +HYVN Q
Sbjct: 177 RKTAETQTELIGGADMYMPVCRRHYVNGQ 205



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +2

Query: 2   LEVIGIDEAQFFDDLYDFCRKAADNDGKTIVIAGLDGDYLR 124
           ++VIGIDEAQFF+DLYDFC KAAD+DGKT+++AGLDGDYLR
Sbjct: 102 IDVIGIDEAQFFEDLYDFCSKAADHDGKTVIVAGLDGDYLR 142


>ref|XP_002307900.1| predicted protein [Populus trichocarpa] gi|222853876|gb|EEE91423.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  116 bits (291), Expect = 3e-24
 Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 9/89 (10%)
 Frame = +3

Query: 234 HDICSQFSRHLIKLI---------RRRSFGSVLDIIPLADTITKLTARCELCGKRAFFTL 386
           +D C + + H  K +          RRSFGSVLDIIPLAD++TKL+ARCE+CGKRAFFTL
Sbjct: 94  YDFCREVADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLSARCEICGKRAFFTL 153

Query: 387 RKIDDSQTELIGGADVYMPVCHQHYVNRQ 473
           RK +++QTELIGGADVYMPVC QHYV+ Q
Sbjct: 154 RKTEETQTELIGGADVYMPVCRQHYVSGQ 182



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +2

Query: 2   LEVIGIDEAQFFDDLYDFCRKAADNDGKTIVIAGLDGDYLR 124
           L+VIGIDEAQFF+DLYDFCR+ AD+DGKT+++AGLDGDYLR
Sbjct: 79  LDVIGIDEAQFFEDLYDFCREVADHDGKTVIVAGLDGDYLR 119


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