BLASTX nr result

ID: Panax21_contig00009717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00009717
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]                 312   7e-83
dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]                       287   3e-75
dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]                            287   3e-75
gb|ABM55245.1| transposon-like protein [Beta vulgaris]                275   2e-71
emb|CAM59133.1| putative transposase [Antirrhinum majus]              274   2e-71

>gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]
          Length = 654

 Score =  312 bits (800), Expect = 7e-83
 Identities = 153/285 (53%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
 Frame = +3

Query: 6    EDGVQTHLDMKDICKRPGLEL-YDSPNGKIVKPHARYTLSKKQVEDVCTWVKSLKLPDGY 182
            +D ++  LD+   C R  +EL YD    ++ KP A + L K     V  W+KSL+ PDG+
Sbjct: 372  KDNIKARLDIALYCNRKNMELVYDE--SRVAKPRASFVLEKNAQLLVYKWLKSLRFPDGH 429

Query: 183  ASNIARCVT--GGKLQGMKSHDCHVFMERLMPIAFRDLLDKTIWDALMDLSHFFKDLCSK 356
            ASNI+R V+    +L GM SHDCHVFM+ L+P+AFRDLL K IWDAL +++HFF+D+CS 
Sbjct: 430  ASNISRLVSIEDCRLYGMNSHDCHVFMQTLIPLAFRDLLPKGIWDALTEINHFFRDICSN 489

Query: 357  SLNEKDMSVLEKNIIEITCKLEKIFPPGFFDSMEHLQIHLPYEARVGGPVQYRWMYPFER 536
             LN   +  ++ NI+E  CKLE IFPP FFDSMEHL IHLP+EA+ GGPVQYRWMYPFER
Sbjct: 490  KLNVDHIERIQTNIVETLCKLEMIFPPSFFDSMEHLPIHLPFEAKAGGPVQYRWMYPFER 549

Query: 537  VMGNLKRKVKNRAYVEESICEAYSFDEISTFVSDYFPDEILTKANRVSRHDDGGNVELNG 716
             + N+K+KVKN+A+VE SICEAY  +EISTF+S YF   + T+ NRV RHDDGG V  +G
Sbjct: 550  YLFNIKKKVKNKAHVEASICEAYIVEEISTFISYYFEPHLRTRINRVPRHDDGGEVPSSG 609

Query: 717  RLSVFGLSGRAYGKG--KRIFLSEQELHAAHTYILLNCEEIDEFV 845
             LS+F  +GR   K   +  +LSE E   AH Y+L NC+E+  F+
Sbjct: 610  NLSIFSNTGRPTPKNAVRGRYLSEIEFKQAHNYVLFNCDELRPFI 654


>dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]
          Length = 988

 Score =  287 bits (734), Expect = 3e-75
 Identities = 144/279 (51%), Positives = 182/279 (65%), Gaps = 3/279 (1%)
 Frame = +3

Query: 6   EDGVQTHLDMKDICKRPGLELYDSPNGKIVKPHARYTLSKKQVEDVCTWVKSLKLPDGYA 185
           +D  +   D+  +C+RP L + +S       P A Y+L KK  E VC W++ LK PDGY 
Sbjct: 32  KDNAKARADIALLCRRPELAIDESTRKY---PKACYSLDKKGKEAVCKWLQDLKFPDGYV 88

Query: 186 SNIARCVTGGK--LQGMKSHDCHVFMERLMPIAFRDLLDKTIWDALMDLSHFFKDLCSKS 359
           SN+ RC+   K  L GMKSHDCHVFM+RLMPIAFR+ L   +W+A+ +LS FFKDL S +
Sbjct: 89  SNMGRCIDMKKYKLFGMKSHDCHVFMQRLMPIAFREFLPNNVWEAVTELSLFFKDLTSAT 148

Query: 360 LNEKDMSVLEKNIIEITCKLEKIFPPGFFDSMEHLQIHLPYEARVGGPVQYRWMYPFERV 539
           L   DM  LE+ I  I CKLE+IFPP  FDSMEHL +HLPYEAR+ GPVQYRWMYPFER 
Sbjct: 149 LKVSDMCRLEEQIPVILCKLERIFPPALFDSMEHLLVHLPYEARIAGPVQYRWMYPFERF 208

Query: 540 MGNLKRKVKNRAYVEESICEAYSFDEISTFVSDYFPDEILTKANRVSRHD-DGGNVELNG 716
           + +LK  +KN+A VE S+C AY  +E STF S YF   + TK  +V R+D  GG     G
Sbjct: 209 LRHLKNNIKNKARVEGSMCNAYLVEEASTFCSHYFEQHVQTKHRKVPRNDSSGGGENFEG 268

Query: 717 RLSVFGLSGRAYGKGKRIFLSEQELHAAHTYILLNCEEI 833
             S+F   GRA G     +L ++E  AAH Y+LLNC E+
Sbjct: 269 NFSIFSHPGRASGCANVRYLDDREYMAAHNYVLLNCPEV 307


>dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]
          Length = 812

 Score =  287 bits (734), Expect = 3e-75
 Identities = 144/279 (51%), Positives = 182/279 (65%), Gaps = 3/279 (1%)
 Frame = +3

Query: 6    EDGVQTHLDMKDICKRPGLELYDSPNGKIVKPHARYTLSKKQVEDVCTWVKSLKLPDGYA 185
            +D  +   D+  +C+RP L + +S       P A Y+L KK  E VC W++ LK PDGY 
Sbjct: 256  KDNAKARADIALLCRRPELAIDESTRKY---PKACYSLDKKGKEAVCKWLQDLKFPDGYV 312

Query: 186  SNIARCVTGGK--LQGMKSHDCHVFMERLMPIAFRDLLDKTIWDALMDLSHFFKDLCSKS 359
            SN+ RC+   K  L GMKSHDCHVFM+RLMPIAFR+ L   +W+A+ +LS FFKDL S +
Sbjct: 313  SNMGRCIDMKKYKLFGMKSHDCHVFMQRLMPIAFREFLPNNVWEAVTELSLFFKDLTSAT 372

Query: 360  LNEKDMSVLEKNIIEITCKLEKIFPPGFFDSMEHLQIHLPYEARVGGPVQYRWMYPFERV 539
            L   DM  LE+ I  I CKLE+IFPP  FDSMEHL +HLPYEAR+ GPVQYRWMYPFER 
Sbjct: 373  LKVSDMCRLEEQIPVILCKLERIFPPALFDSMEHLLVHLPYEARIAGPVQYRWMYPFERF 432

Query: 540  MGNLKRKVKNRAYVEESICEAYSFDEISTFVSDYFPDEILTKANRVSRHD-DGGNVELNG 716
            + +LK  +KN+A VE S+C AY  +E STF S YF   + TK  +V R+D  GG     G
Sbjct: 433  LRHLKNNIKNKARVEGSMCNAYLVEEASTFCSHYFEQHVQTKHRKVPRNDSSGGGENFEG 492

Query: 717  RLSVFGLSGRAYGKGKRIFLSEQELHAAHTYILLNCEEI 833
              S+F   GRA G     +L ++E  AAH Y+LLNC E+
Sbjct: 493  NFSIFSHPGRASGCANVRYLDDREYMAAHNYVLLNCPEV 531


>gb|ABM55245.1| transposon-like protein [Beta vulgaris]
          Length = 1399

 Score =  275 bits (702), Expect = 2e-71
 Identities = 139/286 (48%), Positives = 186/286 (65%), Gaps = 6/286 (2%)
 Frame = +3

Query: 9    DGVQTHLDMKDICKRPGLELYDSPNGKIVKPHARYTLSKKQVEDVCTWVKSLKLPDGYAS 188
            D +    DM  +CKR  LEL D   G + KP A YTL K Q +  C WV+ LK PD +AS
Sbjct: 467  DTLSARKDMTRVCKRHELELVDDGVGNLTKPKAPYTLDKAQKKVFCEWVRDLKFPDDFAS 526

Query: 189  NIARCV--TGGKLQGMKSHDCHVFMERLMPIAFRDLLDKTIWDALMDLSHFFKDLCSKSL 362
            N++RCV  +  KLQG+KSHDCHVFMERL+P+  ++LL   +W A+ ++S FF+DLC+ ++
Sbjct: 527  NLSRCVDLSSSKLQGLKSHDCHVFMERLLPVGLKELLPLHVWKAITEISQFFRDLCASTI 586

Query: 363  NEKDMSVLEKNIIEITCKLEKIFPPGFFDSMEHLQIHLPYEARVGGPVQYRWMYPFERVM 542
               +M  LE NI EI CKLEKIFP  FF+SMEHL +HLPYEA+VGGPVQYRWMYPFER++
Sbjct: 587  KVSEMKRLENNIAEILCKLEKIFPSSFFNSMEHLPVHLPYEAKVGGPVQYRWMYPFERLL 646

Query: 543  GNLKRKVKNRAYVEESICEAYSFDEISTFVSDYFPDEILTKANRVSRHDDGGNVELNGRL 722
             +LKRKV N+A VE SIC AY  +E + F S+YF   + TK+  + R+ +      +G L
Sbjct: 647  NHLKRKVGNKARVEGSICNAYLTEETANFCSNYFQPGVDTKSRDLGRNVNPDVASTHG-L 705

Query: 723  SVFGL----SGRAYGKGKRIFLSEQELHAAHTYILLNCEEIDEFVR 848
             V  L     GR    G+  +L ++E   AH Y+L N   + ++ R
Sbjct: 706  GVPELFREDCGRRGTDGRLRWLQDKEYDRAHLYVLANSGILSDYER 751


>emb|CAM59133.1| putative transposase [Antirrhinum majus]
          Length = 919

 Score =  274 bits (701), Expect = 2e-71
 Identities = 145/286 (50%), Positives = 189/286 (66%), Gaps = 5/286 (1%)
 Frame = +3

Query: 6    EDGVQTHLDMKDICKRPGLELYDSPNGKIVKPHARYTLSKKQVEDVCTWVKSLKLPDGYA 185
            +D +    D++ +  R  L L    +GK+ K  A Y LSK+Q   V  W++ L+ PDGYA
Sbjct: 485  KDNMNARRDLQLLTNRRTLFLQTGRDGKLYKRKAVYCLSKEQNIKVLEWLRGLRFPDGYA 544

Query: 186  SNIARCVTGG--KLQGMKSHDCHVFMERLMPIAFRDLLDKTIWDALMDLSHFFKDLCSKS 359
            SNI+RCV     +L GM+SHDCHVFM+RLMP AF D L  ++W  L+++S+FF+ LC+  
Sbjct: 545  SNISRCVQMQHLRLAGMRSHDCHVFMQRLMPNAFHDFLPDSVWGPLVEVSNFFRALCATE 604

Query: 360  LNEKDMSVLEKNIIEITCKLEKIFPPGFFDSMEHLQIHLPYEARVGGPVQYRWMYPFERV 539
            L + DM VL+  I+   CKLEKIFPP FFDSMEHL IHLP+EA+VGGPVQYRWMYPFER 
Sbjct: 605  LRKSDMEVLQSTIVVTMCKLEKIFPPSFFDSMEHLAIHLPWEAKVGGPVQYRWMYPFERR 664

Query: 540  MGNLKRKVKNRAYVEESICEAYSFDEISTFVSDYFPDEILTKANRVSRHD---DGGNVEL 710
            M  LKR   N+A VE SICEAY   EI+ F S YF   I T+ANR++R++   D  N E 
Sbjct: 665  MFELKRDAGNKARVEASICEAYVMGEIANFSSHYFEYGIETRANRLNRNEVEMDQNNNE- 723

Query: 711  NGRLSVFGLSGRAYGKGKRIFLSEQELHAAHTYILLNCEEIDEFVR 848
               +S+F   G+A G+G+   L+  E  AA  YILLN  E+D ++R
Sbjct: 724  -STISIFQKRGKALGRGRTKHLTLAEHQAAERYILLNYPEVDCWLR 768


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